Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00221

Gene Name Gene ID Reads Annotation
LINC00221 ENSG00000270816 2 long intergenic non-protein coding RNA 221 [Source:HGNC Symbol;Acc:HGNC:20169]



Genes with expression patterns similar to LINC00221

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00221 ENSG00000270816 2 2 1.000 1.000 long intergenic non-protein coding RNA 221 [Source:HGNC Symbol;Acc:HGNC:20169]
2. CDCP2 ENSG00000157211 2 1.89 1.000 0.890 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
3. HTR2C ENSG00000147246 4 1 1.000 - 5-hydroxytryptamine receptor 2C [Source:HGNC Symbol;Acc:HGNC:5295]
4. TAS2R1 ENSG00000169777 3 1 1.000 - taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]
5. GUCA1C ENSG00000138472 1 1 - 1.000 guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
6. LBP ENSG00000129988 12 1 1.000 - lipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]
7. ANXA13 ENSG00000104537 4 1 1.000 - annexin A13 [Source:HGNC Symbol;Acc:HGNC:536]
8. GUCY2C ENSG00000070019 2 1 1.000 - guanylate cyclase 2C [Source:HGNC Symbol;Acc:HGNC:4688]
9. DYDC1 ENSG00000170788 3 1 1.000 - DPY30 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23460]
10. LCN12 ENSG00000184925 9 1 - 1.000 lipocalin 12 [Source:HGNC Symbol;Acc:HGNC:28733]
11. LINC01226 ENSG00000284543 5 1 1.000 - long intergenic non-protein coding RNA 1226 [Source:HGNC Symbol;Acc:HGNC:49678]
12. PGM5P3-AS1 ENSG00000277631 5 1 1.000 - PGM5P3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51194]
13. OR2B3 ENSG00000204703, ENSG00000206524, ENSG00000225736, ENSG00000226832, ENSG00000231319, ENSG00000233054, ENSG00000233180, ENSG00000233687 1 1 - 1.000 olfactory receptor family 2 subfamily B member 3 [Source:HGNC Symbol;Acc:HGNC:8238]
14. MMP3 ENSG00000149968 5 1 - 1.000 matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]
15. SMIM2 ENSG00000139656 1 1 - 1.000 small integral membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:28776]
16. LOC101927881 5 1 1.000 - uncharacterized LOC101927881
17. TTLL2 ENSG00000120440 1 1 1.000 - tubulin tyrosine ligase like 2 [Source:HGNC Symbol;Acc:HGNC:21211]
18. KCNAB1-AS1 ENSG00000242370 2 1 - 1.000 KCNAB1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40316]
19. LOC101928435 1 1 1.000 - uncharacterized LOC101928435
20. SOHLH2 ENSG00000120669 6 1 1.000 - spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:26026]
21. LINC00970 ENSG00000203601 1 1 1.000 - long intergenic non-protein coding RNA 970 [Source:HGNC Symbol;Acc:HGNC:48730]
22. SYS1-DBNDD2 ENSG00000254806 1 1 - 1.000 SYS1-DBNDD2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:33535]
23. RUSC1-AS1 ENSG00000225855 7 1 1.000 - RUSC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26680]
24. CEACAM4 ENSG00000105352, ENSG00000274131 1 1 - 1.000 carcinoembryonic antigen related cell adhesion molecule 4 [Source:HGNC Symbol;Acc:HGNC:1816]
25. C1QTNF3-AMACR ENSG00000273294 10 1 1.000 - C1QTNF3-AMACR readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49198]
26. DGKG ENSG00000058866 3 1 - 1.000 diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
27. B3GALT1 ENSG00000172318 17 1 1.000 - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
28. ADTRP ENSG00000111863 3 1 - 1.000 androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
29. TYR ENSG00000077498 1 1 - 1.000 tyrosinase [Source:HGNC Symbol;Acc:HGNC:12442]
30. OR5H2 ENSG00000197938 1 1 - 1.000 olfactory receptor family 5 subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:14752]
31. IGFBP7-AS1 ENSG00000245067 1 1 - 1.000 IGFBP7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40296]
32. KRTAP13-2 ENSG00000182816 1 1 1.000 - keratin associated protein 13-2 [Source:HGNC Symbol;Acc:HGNC:18923]
33. ZNF804B ENSG00000182348 5 1 - 1.000 zinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]
34. C7orf76 5 1 1.000 - chromosome 7 open reading frame 76, transcript variant 2
35. SLC5A10 ENSG00000154025 1 1 - 1.000 solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
36. GPT ENSG00000167701 6 1 1.000 - glutamic--pyruvic transaminase [Source:HGNC Symbol;Acc:HGNC:4552]
37. OR10K2 ENSG00000180708 1 1 1.000 - olfactory receptor family 10 subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:14826]
38. SLC13A2 ENSG00000007216 3 1 1.000 - solute carrier family 13 member 2 [Source:HGNC Symbol;Acc:HGNC:10917]
39. ADGRE2 ENSG00000127507 5 1 1.000 - adhesion G protein-coupled receptor E2 [Source:HGNC Symbol;Acc:HGNC:3337]
40. LINC00854 2 1 1.000 - long intergenic non-protein coding RNA 854
41. LINC01106 ENSG00000175772 12 1 1.000 - long intergenic non-protein coding RNA 1106 [Source:HGNC Symbol;Acc:HGNC:26769]
42. EMC6 ENSG00000127774 12 1 1.000 - ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]
43. LOC101928979 16 1 1.000 - uncharacterized LOC101928979, transcript variant 2
44. HSD17B3 ENSG00000130948 2 1 1.000 - hydroxysteroid 17-beta dehydrogenase 3 [Source:HGNC Symbol;Acc:HGNC:5212]
45. OR5H14 ENSG00000236032 1 1 1.000 - olfactory receptor family 5 subfamily H member 14 [Source:HGNC Symbol;Acc:HGNC:31286]
46. SLC22A24 ENSG00000197658 1 1 1.000 - solute carrier family 22 member 24 [Source:HGNC Symbol;Acc:HGNC:28542]
47. HRASLS2 ENSG00000133328 3 1 1.000 - HRAS like suppressor 2 [Source:HGNC Symbol;Acc:HGNC:17824]
48. C1QL2 ENSG00000144119 4 1 1.000 - complement C1q like 2 [Source:HGNC Symbol;Acc:HGNC:24181]
49. ZNF32-AS2 ENSG00000230565 2 1 1.000 - ZNF32 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:23593]
50. CBLC ENSG00000142273 5 1 1.000 - Cbl proto-oncogene C [Source:HGNC Symbol;Acc:HGNC:15961]
51. LOC100288181 6 1 1.000 - uncharacterized LOC100288181
52. MIR497HG ENSG00000267532 1 1 - 1.000 mir-497-195 cluster host gene [Source:HGNC Symbol;Acc:HGNC:39523]
53. BRWD1-AS1 ENSG00000238141 1 1 - 1.000 BRWD1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40614]
54. KCNAB1-AS2 ENSG00000240596 3 1 - 1.000 KCNAB1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40315]
55. LINC01031 ENSG00000232077 1 1 - 1.000 long intergenic non-protein coding RNA 1031 [Source:HGNC Symbol;Acc:HGNC:49017]
56. ZNF826P ENSG00000231205 14 1 1.000 - zinc finger protein 826, pseudogene [Source:HGNC Symbol;Acc:HGNC:33875]
57. LOC101929680 3 0.99 - 0.990 uncharacterized LOC101929680
58. LINC01123 ENSG00000204588 1 0.989 - 0.989 long intergenic non-protein coding RNA 1123 [Source:HGNC Symbol;Acc:HGNC:49269]
59. TM4SF19-TCTEX1D2 ENSG00000273331 1 0.986 - 0.986 TM4SF19-TCTEX1D2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49190]
60. LINC01506 ENSG00000234506 1 0.975 - 0.975 long intergenic non-protein coding RNA 1506 [Source:HGNC Symbol;Acc:HGNC:51187]
61. LOC101060553 5 0.961 - 0.961 uncharacterized LOC101060553
62. RGPD5 ENSG00000015568 5 0.961 - 0.961 RANBP2-like and GRIP domain containing 5 [Source:HGNC Symbol;Acc:HGNC:32418]
63. SLC34A1 ENSG00000131183 86 0.952 - 0.952 solute carrier family 34 member 1 [Source:HGNC Symbol;Acc:HGNC:11019]
64. CXCL10 ENSG00000169245 1 0.947 - 0.947 C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]
65. HIGD2B ENSG00000175202 3 0.944 - 0.944 HIG1 hypoxia inducible domain family member 2B [Source:HGNC Symbol;Acc:HGNC:26984]
66. C15orf52 13 0.932 0.932 - chromosome 15 open reading frame 52
67. ODF3L2 ENSG00000181781 2 0.92 - 0.920 outer dense fiber of sperm tails 3 like 2 [Source:HGNC Symbol;Acc:HGNC:26841]
68. SEPT4-AS1 ENSG00000264672 1 0.92 - 0.920 SEPT4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51345]
69. LOC100507651 LOC100507651 32 0.92 - 0.920
70. C19orf33 ENSG00000167644 17 0.91 0.910 - chromosome 19 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:16668]
71. LINC00052 ENSG00000259527 3 0.91 - 0.910 long intergenic non-protein coding RNA 52 [Source:HGNC Symbol;Acc:HGNC:26455]
72. LOC102723385 4 0.907 0.907 - uncharacterized LOC102723385, transcript variant 4
73. GLOD5 ENSG00000171433 4 0.904 - 0.904 glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
74. ACSM4 ENSG00000215009 7 0.901 - 0.901 acyl-CoA synthetase medium chain family member 4 [Source:HGNC Symbol;Acc:HGNC:32016]
75. LINC00473 12 0.9 - 0.900 long intergenic non-protein coding RNA 473, transcript variant 2
76. GACAT2 ENSG00000265962 1 0.884 - 0.884 gastric cancer associated transcript 2 [Source:HGNC Symbol;Acc:HGNC:50516]
77. CRB3 ENSG00000130545 9 0.883 0.883 - crumbs 3, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:20237]
78. LOC400558 8 0.874 - 0.874 uncharacterized LOC400558
79. TINAG ENSG00000137251 40 0.865 - 0.865 tubulointerstitial nephritis antigen [Source:HGNC Symbol;Acc:HGNC:14599]
80. DDN ENSG00000181418 742 0.861 - 0.861 dendrin [Source:HGNC Symbol;Acc:HGNC:24458]
81. RBM5-AS1 ENSG00000281691 4 0.838 0.838 - RBM5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48871]
82. C19orf80 C19orf80 11 0.834 0.834 -
83. OR4F13P ENSG00000214344 26 0.833 0.833 - olfactory receptor family 4 subfamily F member 13 pseudogene [Source:HGNC Symbol;Acc:HGNC:15076]
84. MSX2P1 ENSG00000229590 8 0.816 - 0.816 msh homeobox 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:24976]
85. AADACL4 ENSG00000204518 5 0.807 - 0.807 arylacetamide deacetylase like 4 [Source:HGNC Symbol;Acc:HGNC:32038]
86. NFIX ENSG00000008441 33 0.798 0.798 - nuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]
87. SPAG5-AS1 ENSG00000227543 14 0.795 - 0.795 SPAG5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41140]
88. TDRD5 ENSG00000162782 15 0.792 - 0.792 tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
89. LOC101929596 3 0.786 - 0.786 uncharacterized LOC101929596
90. FRMD1 ENSG00000153303 69 0.772 - 0.772 FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]
91. MRGPRF ENSG00000172935 68 0.766 - 0.766 MAS related GPR family member F [Source:HGNC Symbol;Acc:HGNC:24828]
92. MOGAT3 ENSG00000106384 17 0.765 - 0.765 monoacylglycerol O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:23249]
93. VWA2 ENSG00000165816 23 0.761 0.761 - von Willebrand factor A domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24709]
94. NTNG1 ENSG00000162631 293 0.752 - 0.752 netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
95. CABP5 ENSG00000105507 3 0.748 - 0.748 calcium binding protein 5 [Source:HGNC Symbol;Acc:HGNC:13714]
96. LINC00668 ENSG00000265933 3 0.747 - 0.747 long intergenic non-protein coding RNA 668 [Source:HGNC Symbol;Acc:HGNC:44328]
97. C15orf27 C15orf27 41 0.74 - 0.740
98. SMEK3P SMEK3P 1 0.737 - 0.737
99. NPSR1-AS1 ENSG00000197085 8 0.737 0.737 - NPSR1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:22128]
100. ESR1 ENSG00000091831 3 0.737 0.737 - estrogen receptor 1 [Source:HGNC Symbol;Acc:HGNC:3467]

There are 16 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA