Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00052

Gene Name Gene ID Reads Annotation
LINC00052 ENSG00000259527 3 long intergenic non-protein coding RNA 52 [Source:HGNC Symbol;Acc:HGNC:26455]



Genes with expression patterns similar to LINC00052

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00052 ENSG00000259527 3 2 1.000 1.000 long intergenic non-protein coding RNA 52 [Source:HGNC Symbol;Acc:HGNC:26455]
2. DDX4 ENSG00000152670 3 1 1.000 - DEAD-box helicase 4 [Source:HGNC Symbol;Acc:HGNC:18700]
3. TNRC18P1 ENSG00000249661 5 1 1.000 - trinucleotide repeat containing 18 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:43881]
4. DCSTAMP ENSG00000164935 4 1 1.000 - dendrocyte expressed seven transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18549]
5. LINC01347 ENSG00000214837, ENSG00000280534, ENSG00000280994 10 1 1.000 - long intergenic non-protein coding RNA 1347 [Source:HGNC Symbol;Acc:HGNC:50566]
6. EML5 ENSG00000165521 11 1 1.000 - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
7. DMRTC2 ENSG00000142025 2 1 1.000 - DMRT like family C2 [Source:HGNC Symbol;Acc:HGNC:13911]
8. MMP10 ENSG00000166670 4 1 1.000 - matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]
9. PKD1L2 ENSG00000166473 5 1 1.000 - polycystin 1 like 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:21715]
10. LOC284930 2 1 1.000 - uncharacterized LOC284930
11. UPK3A ENSG00000100373 5 1 1.000 - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
12. PCDHGA7 ENSG00000253537 6 1 1.000 - protocadherin gamma subfamily A, 7 [Source:HGNC Symbol;Acc:HGNC:8705]
13. ANKFN1 ENSG00000153930 6 1 1.000 - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
14. RPS16P5 ENSG00000217527 10 1 1.000 - ribosomal protein S16 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:36183]
15. BVES-AS1 ENSG00000203808 17 1 1.000 - BVES antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:21223]
16. C20orf197 ENSG00000176659 3 1 1.000 - chromosome 20 open reading frame 197 [Source:HGNC Symbol;Acc:HGNC:26601]
17. TMEM95 ENSG00000182896 3 1 1.000 - transmembrane protein 95 [Source:HGNC Symbol;Acc:HGNC:27898]
18. LOC653786 2 1 1.000 - otoancorin pseudogene
19. MICALCL 3 1 1.000 - MICAL C-terminal like
20. LINC01021 2 1 1.000 - long intergenic non-protein coding RNA 1021
21. LOC101927406 4 1 1.000 - uncharacterized LOC101927406
22. GPRC6A ENSG00000173612 2 1 1.000 - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
23. DSCAM-IT1 ENSG00000233756 2 1 1.000 - DSCAM intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41327]
24. MLN ENSG00000096395 2 1 1.000 - motilin [Source:HGNC Symbol;Acc:HGNC:7141]
25. KANTR ENSG00000232593 6 1 1.000 - KDM5C adjacent transcript [Source:HGNC Symbol;Acc:HGNC:49510]
26. RNF151 ENSG00000179580 2 1 1.000 - ring finger protein 151 [Source:HGNC Symbol;Acc:HGNC:23235]
27. HIGD2B ENSG00000175202 3 0.988 - 0.988 HIG1 hypoxia inducible domain family member 2B [Source:HGNC Symbol;Acc:HGNC:26984]
28. CXCL10 ENSG00000169245 1 0.96 - 0.960 C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]
29. TM4SF19-TCTEX1D2 ENSG00000273331 1 0.948 - 0.948 TM4SF19-TCTEX1D2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49190]
30. LINC00850 ENSG00000280752 5 0.947 0.947 - long intergenic non-protein coding RNA 850 [Source:HGNC Symbol;Acc:HGNC:45092]
31. LINC01506 ENSG00000234506 1 0.937 - 0.937 long intergenic non-protein coding RNA 1506 [Source:HGNC Symbol;Acc:HGNC:51187]
32. WNT6 ENSG00000115596 22 0.912 0.912 - Wnt family member 6 [Source:HGNC Symbol;Acc:HGNC:12785]
33. ZNF804B ENSG00000182348 5 0.91 - 0.910 zinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]
34. SLC5A10 ENSG00000154025 1 0.91 - 0.910 solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
35. LINC01031 ENSG00000232077 1 0.91 - 0.910 long intergenic non-protein coding RNA 1031 [Source:HGNC Symbol;Acc:HGNC:49017]
36. BRWD1-AS1 ENSG00000238141 1 0.91 - 0.910 BRWD1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40614]
37. MIR497HG ENSG00000267532 1 0.91 - 0.910 mir-497-195 cluster host gene [Source:HGNC Symbol;Acc:HGNC:39523]
38. KCNAB1-AS2 ENSG00000240596 3 0.91 - 0.910 KCNAB1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40315]
39. LCN12 ENSG00000184925 9 0.91 - 0.910 lipocalin 12 [Source:HGNC Symbol;Acc:HGNC:28733]
40. MMP3 ENSG00000149968 5 0.91 - 0.910 matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]
41. SMIM2 ENSG00000139656 1 0.91 - 0.910 small integral membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:28776]
42. OR2B3 ENSG00000204703, ENSG00000206524, ENSG00000225736, ENSG00000226832, ENSG00000231319, ENSG00000233054, ENSG00000233180, ENSG00000233687 1 0.91 - 0.910 olfactory receptor family 2 subfamily B member 3 [Source:HGNC Symbol;Acc:HGNC:8238]
43. GUCA1C ENSG00000138472 1 0.91 - 0.910 guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
44. CEACAM4 ENSG00000105352, ENSG00000274131 1 0.91 - 0.910 carcinoembryonic antigen related cell adhesion molecule 4 [Source:HGNC Symbol;Acc:HGNC:1816]
45. LINC00221 ENSG00000270816 2 0.91 - 0.910 long intergenic non-protein coding RNA 221 [Source:HGNC Symbol;Acc:HGNC:20169]
46. SYS1-DBNDD2 ENSG00000254806 1 0.91 - 0.910 SYS1-DBNDD2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:33535]
47. TYR ENSG00000077498 1 0.91 - 0.910 tyrosinase [Source:HGNC Symbol;Acc:HGNC:12442]
48. IGFBP7-AS1 ENSG00000245067 1 0.91 - 0.910 IGFBP7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40296]
49. OR5H2 ENSG00000197938 1 0.91 - 0.910 olfactory receptor family 5 subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:14752]
50. DGKG ENSG00000058866 3 0.91 - 0.910 diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
51. ADTRP ENSG00000111863 3 0.91 - 0.910 androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
52. KCNAB1-AS1 ENSG00000242370 2 0.91 - 0.910 KCNAB1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40316]
53. LOC101929680 3 0.899 - 0.899 uncharacterized LOC101929680
54. LINC01123 ENSG00000204588 1 0.898 - 0.898 long intergenic non-protein coding RNA 1123 [Source:HGNC Symbol;Acc:HGNC:49269]
55. LOC644669 6 0.884 0.884 - ankyrin repeat domain 30B pseudogene
56. RGPD5 ENSG00000015568 5 0.872 - 0.872 RANBP2-like and GRIP domain containing 5 [Source:HGNC Symbol;Acc:HGNC:32418]
57. LOC101060553 5 0.872 - 0.872 uncharacterized LOC101060553
58. GDF5 ENSG00000125965 14 0.869 0.869 - growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]
59. ACSM4 ENSG00000215009 7 0.864 - 0.864 acyl-CoA synthetase medium chain family member 4 [Source:HGNC Symbol;Acc:HGNC:32016]
60. SLC34A1 ENSG00000131183 86 0.862 - 0.862 solute carrier family 34 member 1 [Source:HGNC Symbol;Acc:HGNC:11019]
61. CAPN11 ENSG00000137225 17 0.853 0.853 - calpain 11 [Source:HGNC Symbol;Acc:HGNC:1478]
62. SEPT4-AS1 ENSG00000264672 1 0.835 - 0.835 SEPT4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51345]
63. LOC100507651 LOC100507651 32 0.835 - 0.835
64. ODF3L2 ENSG00000181781 2 0.835 - 0.835 outer dense fiber of sperm tails 3 like 2 [Source:HGNC Symbol;Acc:HGNC:26841]
65. LOC400558 8 0.83 - 0.830 uncharacterized LOC400558
66. GLIS2-AS1 ENSG00000262686, ENSG00000282703 11 0.826 0.826 - GLIS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51381]
67. SLC22A16 ENSG00000004809 6 0.826 0.826 - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
68. GLOD5 ENSG00000171433 4 0.819 - 0.819 glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
69. LINC00473 12 0.814 - 0.814 long intergenic non-protein coding RNA 473, transcript variant 2
70. SLC14A2-AS1 ENSG00000267097, ENSG00000285384 16 0.811 0.811 - SLC14A2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51125]
71. CDCP2 ENSG00000157211 2 0.807 - 0.807 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
72. DGCR10 ENSG00000273164 5 0.806 0.806 - DiGeorge syndrome critical region gene 10 [Source:HGNC Symbol;Acc:HGNC:17864]
73. GACAT2 ENSG00000265962 1 0.802 - 0.802 gastric cancer associated transcript 2 [Source:HGNC Symbol;Acc:HGNC:50516]
74. LGALS9C ENSG00000171916, ENSG00000284021 5 0.794 0.794 - galectin 9C [Source:HGNC Symbol;Acc:HGNC:33874]
75. TINAG ENSG00000137251 40 0.783 - 0.783 tubulointerstitial nephritis antigen [Source:HGNC Symbol;Acc:HGNC:14599]
76. ITGA9-AS1 ENSG00000235257 7 0.781 0.781 - ITGA9 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49668]
77. MAMDC2-AS1 ENSG00000204706, ENSG00000277409, ENSG00000277517 13 0.777 0.777 - MAMDC2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48719]
78. DDN ENSG00000181418 742 0.776 - 0.776 dendrin [Source:HGNC Symbol;Acc:HGNC:24458]
79. CSN1S1 ENSG00000126545 16 0.768 0.768 - casein alpha s1 [Source:HGNC Symbol;Acc:HGNC:2445]
80. KIAA0087 ENSG00000122548 21 0.746 0.746 - KIAA0087 lncRNA [Source:HGNC Symbol;Acc:HGNC:22191]
81. C19orf38 ENSG00000214212 8 0.745 0.745 - chromosome 19 open reading frame 38 [Source:HGNC Symbol;Acc:HGNC:34073]
82. EGR3 ENSG00000179388 6 0.745 0.745 - early growth response 3 [Source:HGNC Symbol;Acc:HGNC:3240]
83. PDZD7 ENSG00000186862 22 0.745 0.745 - PDZ domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26257]
84. MSX2P1 ENSG00000229590 8 0.737 - 0.737 msh homeobox 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:24976]
85. ARTN ENSG00000117407 5 0.735 0.735 - artemin [Source:HGNC Symbol;Acc:HGNC:727]
86. SPAG5-AS1 ENSG00000227543 14 0.731 - 0.731 SPAG5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41140]
87. AADACL4 ENSG00000204518 5 0.73 - 0.730 arylacetamide deacetylase like 4 [Source:HGNC Symbol;Acc:HGNC:32038]
88. PRCD ENSG00000214140 1 0.727 - 0.727 photoreceptor disc component [Source:HGNC Symbol;Acc:HGNC:32528]
89. AQP4-AS1 ENSG00000260372 12 0.726 0.726 - AQP4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26399]
90. PTPRT ENSG00000196090 92 0.726 0.726 - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
91. OXCT1-AS1 ENSG00000248668 39 0.722 0.722 - OXCT1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40423]
92. TDRD5 ENSG00000162782 15 0.712 - 0.712 tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
93. MOGAT3 ENSG00000106384 17 0.712 - 0.712 monoacylglycerol O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:23249]
94. SUGT1P3 ENSG00000239827 37 0.712 0.712 - SUGT1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:20513]
95. MYBBP1A ENSG00000132382 6 0.711 0.711 - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
96. LOC101929596 3 0.709 - 0.709 uncharacterized LOC101929596
97. LOC101929709 21 0.702 0.702 - uncharacterized LOC101929709
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA