Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC4

Gene Name Gene ID Reads Annotation
ZIC4 ENSG00000174963 2667 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]



Genes with expression patterns similar to ZIC4

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. ZIC4 ENSG00000174963 2667 2 1.000 1.000 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
2. ZIC2 ENSG00000043355 4457 1.897 0.958 0.939 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
3. ZIC1 ENSG00000152977 18260 1.878 0.947 0.931 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
4. ZIC3 ENSG00000156925 420 1.801 0.882 0.919 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
5. APCDD1 ENSG00000154856 2448 1.8 0.889 0.911 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
6. SOX2 ENSG00000181449 19791 1.796 0.950 0.846 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
7. LINC00461 ENSG00000245526 4465 1.775 0.913 0.862 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
8. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.77 0.884 0.886 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
9. HES6 ENSG00000144485 4284 1.766 0.861 0.905 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
10. RND2 ENSG00000108830 3761 1.764 0.897 0.867 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
11. IGFBPL1 ENSG00000137142 3283 1.749 0.846 0.903 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
12. ZIC5 ENSG00000139800 441 1.748 0.904 0.844 Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
13. DLL1 ENSG00000198719, ENSG00000275555 1642 1.734 0.908 0.826 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
14. ARL4A ENSG00000122644 3071 1.725 0.866 0.859 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
15. POU3F2 ENSG00000184486 2683 1.71 0.890 0.820 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
16. CKB ENSG00000166165 54181 1.708 0.884 0.824 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
17. GDF10 ENSG00000266524 711 1.707 0.840 0.867 growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
18. DTX4 ENSG00000110042 2639 1.705 0.886 0.819 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
19. SYT2 ENSG00000143858 2364 1.705 0.913 0.792 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
20. CRABP1 ENSG00000166426 2178 1.704 0.853 0.851 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
21. HOXB-AS3 ENSG00000233101 1776 1.698 0.924 0.774 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
22. RHBDL3 ENSG00000141314 2571 1.694 0.896 0.798 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
23. LOC100240734 1898 1.69 0.879 0.811 uncharacterized LOC100240734
24. SOX1 ENSG00000182968 1339 1.668 0.860 0.808 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
25. MSI1 ENSG00000135097 6935 1.665 0.857 0.808 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
26. FZD10 ENSG00000111432 608 1.663 0.810 0.853 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
27. SCUBE2 ENSG00000175356 1730 1.64 0.907 0.733 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
28. WSCD1 ENSG00000179314 1121 1.632 0.840 0.792 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
29. LFNG ENSG00000106003 1260 1.63 0.796 0.834 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
30. AXIN2 ENSG00000168646 2778 1.628 0.874 0.754 axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
31. TMEM132C ENSG00000181234 1913 1.626 0.764 0.862 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]
32. PRDM13 ENSG00000112238 312 1.619 0.824 0.795 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
33. HS6ST1 ENSG00000136720 4974 1.618 0.842 0.776 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
34. FLJ12825 ENSG00000248265 822 1.611 0.810 0.801 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
35. HES5 ENSG00000197921, ENSG00000273529 9293 1.61 0.900 0.710 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
36. NRARP ENSG00000198435 1658 1.608 0.876 0.732 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
37. RFX4 ENSG00000111783 1382 1.607 0.836 0.771 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
38. DCC ENSG00000187323 538 1.603 0.837 0.766 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
39. OLIG3 ENSG00000177468 918 1.596 0.766 0.830 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
40. NOTCH1 ENSG00000148400 5516 1.593 0.806 0.787 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
41. ASRGL1 ENSG00000162174 4293 1.586 0.810 0.776 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
42. MSX1 ENSG00000163132 2038 1.577 0.741 0.836 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
43. MIAT ENSG00000225783 2977 1.574 0.797 0.777 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
44. LINC00925 LINC00925 517 1.574 0.831 0.743
45. SP5 ENSG00000204335 211 1.567 0.813 0.754 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
46. TSPAN18 ENSG00000157570 9391 1.564 0.862 0.702 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
47. CXCR4 ENSG00000121966 4708 1.563 0.722 0.841 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
48. WNT3A ENSG00000154342 267 1.561 0.722 0.839 Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
49. PAX3 ENSG00000135903 1126 1.559 0.779 0.780 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
50. GLDC ENSG00000178445 513 1.554 0.747 0.807 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
51. FGFR3 ENSG00000068078 2862 1.551 0.834 0.717 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
52. CSPG5 ENSG00000114646 558 1.549 0.831 0.718 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
53. FAM167A ENSG00000154319 299 1.547 0.806 0.741 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
54. NKD1 ENSG00000140807 2100 1.543 0.747 0.796 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
55. PTPRZ1 ENSG00000106278 1326 1.541 0.773 0.768 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
56. CELSR2 ENSG00000143126 3566 1.536 0.788 0.748 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
57. CTNND2 ENSG00000169862 1640 1.535 0.819 0.716 catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
58. DCLK2 ENSG00000170390 3503 1.519 0.781 0.738 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
59. CECR2 ENSG00000099954 2223 1.519 0.700 0.819 CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
60. CCDC85C ENSG00000205476 3808 1.518 0.730 0.788 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
61. MYCL ENSG00000116990 1128 1.513 0.811 0.702 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
62. DPYSL5 ENSG00000157851 6855 1.506 0.764 0.742 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
63. NES ENSG00000132688 20034 1.504 0.742 0.762 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
64. RASSF2 ENSG00000101265 1157 1.497 0.767 0.730 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
65. CHD7 ENSG00000171316 9450 1.487 0.712 0.775 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]
66. GREB1 ENSG00000196208 4256 1.479 0.740 0.739 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
67. JAM2 ENSG00000154721 1771 1.477 0.757 0.720 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
68. SYT11 ENSG00000132718 3832 1.474 0.721 0.753 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
69. ZBTB16 ENSG00000109906 287 1.454 0.728 0.726 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
70. CDH4 ENSG00000179242, ENSG00000280641 1069 1.408 0.703 0.705 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
71. TKTL1 ENSG00000007350 1212 0.917 0.917 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
72. TOX3 ENSG00000103460 1758 0.909 0.909 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
73. SOX3 ENSG00000134595 5297 0.896 0.896 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
74. FAM181A ENSG00000140067, ENSG00000273533 1757 0.876 0.876 - family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
75. HOXB2 ENSG00000173917 6040 0.875 0.875 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
76. PAX6 ENSG00000007372 3710 0.867 0.867 - paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
77. SLC1A2 ENSG00000110436 1231 0.865 0.865 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
78. SLC2A1 ENSG00000117394 2892 0.863 0.863 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
79. SEMA5B ENSG00000082684 2716 0.858 0.858 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
80. KCNK10 ENSG00000100433 145 0.855 - 0.855 potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
81. SLC1A3 ENSG00000079215 1362 0.855 0.855 - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
82. FZD3 ENSG00000104290 11650 0.852 0.852 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
83. CCER2 ENSG00000262484, ENSG00000283099 118 0.852 - 0.852 coiled-coil glutamate rich protein 2 [Source:HGNC Symbol;Acc:HGNC:44662]
84. RGS16 ENSG00000143333 2239 0.843 - 0.843 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
85. ENPP2 ENSG00000136960 3320 0.842 0.842 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
86. HOXB3 ENSG00000120093 4812 0.841 0.841 - homeobox B3 [Source:HGNC Symbol;Acc:HGNC:5114]
87. SRGAP3 ENSG00000196220 5297 0.839 0.839 - SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
88. TMEM257 484 0.838 0.838 - transmembrane protein 257
89. OTP ENSG00000171540 179 0.832 0.832 - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
90. HOXB9 ENSG00000170689 2051 0.827 - 0.827 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
91. ADGRG1 ENSG00000205336 800 0.825 - 0.825 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
92. PDPN ENSG00000162493 5095 0.822 0.822 - podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
93. TMEM158 ENSG00000249992 678 0.819 0.819 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
94. HOXB8 ENSG00000120068 2378 0.817 - 0.817 homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119]
95. MIR124-2HG ENSG00000254377 940 0.813 - 0.813 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
96. SLITRK2 ENSG00000185985 905 0.804 0.804 - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
97. FAM159B 132 0.802 - 0.802 family with sequence similarity 159 member B
98. RGMA ENSG00000182175 3405 0.798 0.798 - repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
99. C9orf135 ENSG00000204711 56 0.796 - 0.796 chromosome 9 open reading frame 135 [Source:HGNC Symbol;Acc:HGNC:31422]
100. CRNDE ENSG00000245694 3754 0.791 0.791 - colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA