Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXB-AS3

Gene Name Gene ID Reads Annotation
HOXB-AS3 ENSG00000233101 1776 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]



Genes with expression patterns similar to HOXB-AS3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. HOXB-AS3 ENSG00000233101 1776 2 1.000 1.000 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
2. SOX2 ENSG00000181449 19791 1.888 0.938 0.950 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
3. SCUBE2 ENSG00000175356 1730 1.846 0.936 0.910 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
4. POU3F2 ENSG00000184486 2683 1.83 0.888 0.942 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
5. RHBDL3 ENSG00000141314 2571 1.823 0.880 0.943 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
6. LINC00461 ENSG00000245526 4465 1.818 0.910 0.908 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
7. HES5 ENSG00000197921, ENSG00000273529 9293 1.816 0.914 0.902 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
8. SOX1 ENSG00000182968 1339 1.814 0.931 0.883 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
9. RND2 ENSG00000108830 3761 1.808 0.894 0.914 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
10. TKTL1 ENSG00000007350 1212 1.794 0.919 0.875 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
11. ARL4A ENSG00000122644 3071 1.789 0.906 0.883 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
12. CKB ENSG00000166165 54181 1.771 0.841 0.930 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
13. SYT2 ENSG00000143858 2364 1.771 0.903 0.868 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
14. LOC100240734 1898 1.767 0.841 0.926 uncharacterized LOC100240734
15. SLC1A2 ENSG00000110436 1231 1.767 0.890 0.877 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
16. SOX3 ENSG00000134595 5297 1.761 0.863 0.898 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
17. NRARP ENSG00000198435 1658 1.755 0.861 0.894 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
18. CSPG5 ENSG00000114646 558 1.742 0.853 0.889 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
19. CRABP1 ENSG00000166426 2178 1.738 0.921 0.817 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
20. PDPN ENSG00000162493 5095 1.737 0.825 0.912 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
21. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.734 0.829 0.905 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
22. DTX4 ENSG00000110042 2639 1.734 0.821 0.913 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
23. DLL1 ENSG00000198719, ENSG00000275555 1642 1.733 0.908 0.825 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
24. FLJ12825 ENSG00000248265 822 1.729 0.849 0.880 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
25. TOX3 ENSG00000103460 1758 1.729 0.903 0.826 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
26. SLC2A1 ENSG00000117394 2892 1.728 0.894 0.834 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
27. FAM181A ENSG00000140067, ENSG00000273533 1757 1.712 0.858 0.854 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
28. FGFR3 ENSG00000068078 2862 1.71 0.867 0.843 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
29. RGS20 ENSG00000147509 282 1.709 0.823 0.886 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
30. SEMA5B ENSG00000082684 2716 1.698 0.823 0.875 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
31. ZIC4 ENSG00000174963 2667 1.698 0.924 0.774 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
32. CRNDE ENSG00000245694 3754 1.69 0.863 0.827 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
33. WSCD1 ENSG00000179314 1121 1.684 0.807 0.877 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
34. PAX6 ENSG00000007372 3710 1.676 0.829 0.847 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
35. ASRGL1 ENSG00000162174 4293 1.671 0.788 0.883 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
36. HES6 ENSG00000144485 4284 1.669 0.868 0.801 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
37. LFNG ENSG00000106003 1260 1.667 0.819 0.848 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
38. ZIC3 ENSG00000156925 420 1.662 0.901 0.761 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
39. IGFBPL1 ENSG00000137142 3283 1.662 0.830 0.832 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
40. PRDM13 ENSG00000112238 312 1.659 0.859 0.800 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
41. MSI1 ENSG00000135097 6935 1.658 0.812 0.846 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
42. NRIP3 ENSG00000175352 238 1.655 0.805 0.850 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
43. SRGAP3 ENSG00000196220 5297 1.651 0.792 0.859 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
44. TSPAN18 ENSG00000157570 9391 1.641 0.791 0.850 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
45. MYCL ENSG00000116990 1128 1.641 0.755 0.886 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
46. CELSR2 ENSG00000143126 3566 1.64 0.726 0.914 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
47. RASSF2 ENSG00000101265 1157 1.629 0.794 0.835 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
48. PTPRZ1 ENSG00000106278 1326 1.628 0.727 0.901 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
49. FZD10 ENSG00000111432 608 1.621 0.843 0.778 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
50. NOTCH1 ENSG00000148400 5516 1.617 0.789 0.828 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
51. AGO1 ENSG00000092847 2525 1.615 0.755 0.860 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
52. GLDC ENSG00000178445 513 1.614 0.803 0.811 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
53. PAX3 ENSG00000135903 1126 1.612 0.794 0.818 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
54. ZIC1 ENSG00000152977 18260 1.608 0.877 0.731 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
55. LINC01158 1332 1.603 0.722 0.881 long intergenic non-protein coding RNA 1158, transcript variant 4
56. MIAT ENSG00000225783 2977 1.601 0.779 0.822 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
57. ZIC2 ENSG00000043355 4457 1.601 0.898 0.703 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
58. OTP ENSG00000171540 179 1.6 0.844 0.756 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
59. LINC00925 LINC00925 517 1.597 0.839 0.758
60. HS6ST1 ENSG00000136720 4974 1.589 0.787 0.802 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
61. CCDC85C ENSG00000205476 3808 1.584 0.725 0.859 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
62. SOX21 ENSG00000125285 209 1.583 0.776 0.807 SRY-box 21 [Source:HGNC Symbol;Acc:HGNC:11197]
63. RFX4 ENSG00000111783 1382 1.57 0.782 0.788 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
64. ENPP2 ENSG00000136960 3320 1.563 0.803 0.760 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
65. PAK3 ENSG00000077264 890 1.559 0.821 0.738 p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
66. ZBTB16 ENSG00000109906 287 1.555 0.761 0.794 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
67. DPYSL5 ENSG00000157851 6855 1.555 0.702 0.853 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
68. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.546 0.719 0.827 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
69. JAM2 ENSG00000154721 1771 1.537 0.714 0.823 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
70. APCDD1 ENSG00000154856 2448 1.531 0.829 0.702 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
71. FZD3 ENSG00000104290 11650 1.529 0.812 0.717 frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
72. ROBO3 ENSG00000154134 1085 1.522 0.709 0.813 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
73. PAX7 ENSG00000009709 810 1.521 0.705 0.816 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
74. SLITRK2 ENSG00000185985 905 1.52 0.779 0.741 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
75. GREB1 ENSG00000196208 4256 1.516 0.732 0.784 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
76. CHD7 ENSG00000171316 9450 1.498 0.732 0.766 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]
77. ADD2 ENSG00000075340 810 1.467 0.735 0.732 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
78. FZD10-AS1 1074 1.463 0.760 0.703 FZD10 antisense RNA 1 (head to head)
79. B3GAT1 ENSG00000109956 652 1.437 0.702 0.735 beta-1,3-glucuronyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:921]
80. NEDD9 ENSG00000111859 1509 1.427 0.714 0.713 neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
81. ZIC5 ENSG00000139800 441 0.897 0.897 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
82. NUAK2 ENSG00000163545 538 0.876 - 0.876 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
83. FGF19 ENSG00000162344 241 0.867 - 0.867 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
84. CDH4 ENSG00000179242, ENSG00000280641 1069 0.863 - 0.863 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
85. GPRC5B ENSG00000167191 684 0.858 - 0.858 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
86. HOXB9 ENSG00000170689 2051 0.853 - 0.853 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
87. MIR124-2HG ENSG00000254377 940 0.851 - 0.851 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
88. AXIN2 ENSG00000168646 2778 0.847 0.847 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
89. HOXB2 ENSG00000173917 6040 0.844 0.844 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
90. GBX2 ENSG00000168505 227 0.843 - 0.843 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
91. IRX5 ENSG00000176842 2175 0.836 - 0.836 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
92. NES ENSG00000132688 20034 0.835 - 0.835 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
93. UCP2 ENSG00000175567 1141 0.831 - 0.831 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
94. INSM1 ENSG00000173404 3113 0.83 - 0.830 INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]
95. LINC01159 ENSG00000229743 210 0.827 - 0.827 long intergenic non-protein coding RNA 1159 [Source:HGNC Symbol;Acc:HGNC:49514]
96. CCND1 ENSG00000110092 8014 0.824 - 0.824 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
97. LRRN1 ENSG00000175928 3973 0.823 0.823 - leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:HGNC:20980]
98. SYT11 ENSG00000132718 3832 0.823 - 0.823 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
99. OLIG3 ENSG00000177468 918 0.821 0.821 - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
100. ARL4C ENSG00000188042 5437 0.82 - 0.820 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]

There are 117 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA