Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RTN1

Gene Name Gene ID Reads Annotation
RTN1 ENSG00000139970 4545 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]



Genes with expression patterns similar to RTN1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RTN1 ENSG00000139970 4545 2 1.000 1.000 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
2. INA ENSG00000148798 12811 1.954 0.977 0.977 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
3. GAP43 ENSG00000172020 9990 1.933 0.971 0.962 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
4. SST ENSG00000157005 12887 1.933 0.975 0.958 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
5. STMN2 ENSG00000104435 16286 1.926 0.973 0.953 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
6. PDLIM1 ENSG00000107438 11977 1.897 0.946 0.951 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
7. NEFM ENSG00000104722 6565 1.895 0.942 0.953 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
8. MLLT11 ENSG00000213190 18099 1.895 0.975 0.920 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
9. NEFL ENSG00000277586 6204 1.889 0.942 0.947 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
10. MYT1 ENSG00000196132, ENSG00000276876 1089 1.882 0.961 0.921 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
11. CDK5R1 ENSG00000176749 4151 1.88 0.915 0.965 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
12. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 1.88 0.921 0.959 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
13. GDAP1L1 ENSG00000124194 1388 1.872 0.941 0.931 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
14. TUBB3 ENSG00000258947 53998 1.869 0.955 0.914 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
15. SV2C ENSG00000122012 837 1.869 0.924 0.945 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
16. HMP19 643 1.864 0.942 0.922 HMP19 protein
17. L1CAM ENSG00000198910 1652 1.86 0.955 0.905 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
18. CRMP1 ENSG00000072832 9692 1.858 0.959 0.899 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
19. TUBB2A ENSG00000137267 4508 1.856 0.935 0.921 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
20. GNAO1 ENSG00000087258 567 1.843 0.904 0.939 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
21. KIF1A ENSG00000130294 2920 1.835 0.966 0.869 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
22. ENO2 ENSG00000111674 2931 1.834 0.919 0.915 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
23. SYT4 ENSG00000132872 928 1.827 0.913 0.914 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
24. ELAVL3 ENSG00000196361 2164 1.822 0.919 0.903 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
25. SCN3A ENSG00000153253 621 1.82 0.921 0.899 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
26. UBE2QL1 ENSG00000215218 1320 1.819 0.908 0.911 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]
27. ELAVL4 ENSG00000162374 5082 1.808 0.927 0.881 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
28. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 1.802 0.910 0.892 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
29. CAMK2N1 ENSG00000162545 10727 1.798 0.917 0.881 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
30. STMN4 ENSG00000015592 748 1.786 0.891 0.895 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
31. TUBA1A ENSG00000167552 83799 1.783 0.936 0.847 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
32. SYT1 ENSG00000067715 4379 1.775 0.941 0.834 synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
33. KLC1 ENSG00000126214 6387 1.772 0.890 0.882 kinesin light chain 1 [Source:HGNC Symbol;Acc:HGNC:6387]
34. ELAVL2 ENSG00000107105 5067 1.772 0.973 0.799 ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
35. DCX ENSG00000077279 9569 1.771 0.945 0.826 doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
36. TERF2IP ENSG00000166848 18929 1.77 0.916 0.854 TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
37. ATP1A3 ENSG00000105409 428 1.766 0.844 0.922 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
38. RAB6B ENSG00000154917 1104 1.763 0.839 0.924 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
39. KIF5C ENSG00000168280, ENSG00000276734 1294 1.762 0.842 0.920 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
40. MAPRE2 ENSG00000166974 5413 1.761 0.891 0.870 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
41. ECEL1 ENSG00000171551 286 1.758 0.830 0.928 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
42. ARHGAP36 ENSG00000147256 614 1.757 0.847 0.910 Rho GTPase activating protein 36 [Source:HGNC Symbol;Acc:HGNC:26388]
43. CCDC184 ENSG00000177875 785 1.755 0.821 0.934 coiled-coil domain containing 184 [Source:HGNC Symbol;Acc:HGNC:33749]
44. SRRM4 ENSG00000139767 1060 1.752 0.902 0.850 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
45. CNTN2 ENSG00000184144 4674 1.735 0.942 0.793 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
46. LHX3 ENSG00000107187 507 1.733 0.896 0.837 LIM homeobox 3 [Source:HGNC Symbol;Acc:HGNC:6595]
47. REEP1 ENSG00000068615 2132 1.729 0.913 0.816 receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
48. DPYSL3 ENSG00000113657 7319 1.722 0.930 0.792 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
49. MAP2 ENSG00000078018 3573 1.719 0.881 0.838 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
50. PGM2L1 ENSG00000165434 4182 1.719 0.850 0.869 phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
51. LOC101929563 1404 1.715 0.923 0.792 uncharacterized LOC101929563
52. ISLR2 ENSG00000167178 161 1.714 0.777 0.937 immunoglobulin superfamily containing leucine rich repeat 2 [Source:HGNC Symbol;Acc:HGNC:29286]
53. AKAP6 ENSG00000151320 580 1.712 0.834 0.878 A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
54. SEZ6L2 ENSG00000174938 1533 1.712 0.823 0.889 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
55. OLIG1 ENSG00000184221 511 1.708 0.860 0.848 oligodendrocyte transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16983]
56. TRIM36 ENSG00000152503 452 1.704 0.850 0.854 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
57. SNCG ENSG00000173267 1866 1.697 0.883 0.814 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
58. GNG3 ENSG00000162188 958 1.696 0.801 0.895 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
59. BASP1 ENSG00000176788 18176 1.696 0.891 0.805 brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]
60. OLIG2 ENSG00000205927 533 1.695 0.859 0.836 oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]
61. SLC10A4 ENSG00000145248 260 1.693 0.868 0.825 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
62. RET ENSG00000165731 339 1.691 0.804 0.887 ret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]
63. NELL1 ENSG00000165973 2345 1.687 0.895 0.792 neural EGFL like 1 [Source:HGNC Symbol;Acc:HGNC:7750]
64. Sep-03 Sep-03 2608 1.686 0.831 0.855
65. GAB2 ENSG00000033327 1360 1.682 0.897 0.785 GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]
66. SCG3 ENSG00000104112 681 1.68 0.860 0.820 secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
67. VSTM2A ENSG00000170419 227 1.677 0.853 0.824 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
68. TAGLN3 ENSG00000144834 10185 1.674 0.863 0.811 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
69. CHRNA4 ENSG00000101204 750 1.669 0.749 0.920 cholinergic receptor nicotinic alpha 4 subunit [Source:HGNC Symbol;Acc:HGNC:1958]
70. CADPS ENSG00000163618 1353 1.667 0.930 0.737 calcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]
71. STMN3 ENSG00000197457 2808 1.667 0.858 0.809 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
72. UCHL1 ENSG00000154277 28345 1.664 0.899 0.765 ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
73. SNAP25 ENSG00000132639 1533 1.662 0.929 0.733 synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
74. RUFY3 ENSG00000018189 4536 1.66 0.776 0.884 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
75. APC2 ENSG00000115266 1420 1.657 0.900 0.757 APC2, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:24036]
76. PHF21B ENSG00000056487 2704 1.657 0.823 0.834 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
77. CALCB ENSG00000175868 1967 1.654 0.837 0.817 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
78. DBNDD1 ENSG00000003249 1043 1.652 0.835 0.817 dysbindin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28455]
79. SCML4 ENSG00000146285 198 1.648 0.810 0.838 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
80. CHODL ENSG00000154645 212 1.647 0.853 0.794 chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
81. SMPD3 ENSG00000103056 241 1.645 0.832 0.813 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
82. CALM1 ENSG00000198668 24434 1.642 0.876 0.766 calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
83. NCAN ENSG00000130287 1136 1.642 0.841 0.801 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
84. CEND1 ENSG00000184524 300 1.637 0.797 0.840 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
85. NKAIN3 ENSG00000185942 2284 1.636 0.924 0.712 sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829]
86. SCN3B ENSG00000166257 491 1.635 0.774 0.861 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
87. NSG1 ENSG00000168824 2797 1.63 0.860 0.770 neuronal vesicle trafficking associated 1 [Source:HGNC Symbol;Acc:HGNC:18790]
88. RBP1 ENSG00000114115 35038 1.627 0.831 0.796 retinol binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9919]
89. RBFOX3 ENSG00000167281 329 1.625 0.819 0.806 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
90. RUNDC3A ENSG00000108309 522 1.618 0.772 0.846 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
91. APLP1 ENSG00000105290 11270 1.617 0.790 0.827 amyloid beta precursor like protein 1 [Source:HGNC Symbol;Acc:HGNC:597]
92. NGFR ENSG00000064300 5047 1.613 0.829 0.784 nerve growth factor receptor [Source:HGNC Symbol;Acc:HGNC:7809]
93. NCAM1 ENSG00000149294 14656 1.612 0.895 0.717 neural cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:7656]
94. KLHL35 ENSG00000149243 877 1.608 0.834 0.774 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
95. DPYSL2 ENSG00000092964 47074 1.607 0.894 0.713 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
96. FAM19A5 ENSG00000219438 1353 1.604 0.796 0.808 family with sequence similarity 19 member A5, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21592]
97. FABP7 ENSG00000164434 1064 1.6 0.787 0.813 fatty acid binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3562]
98. YWHAG ENSG00000170027 19111 1.6 0.891 0.709 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:HGNC Symbol;Acc:HGNC:12852]
99. CDKN2D ENSG00000129355 839 1.598 0.786 0.812 cyclin dependent kinase inhibitor 2D [Source:HGNC Symbol;Acc:HGNC:1790]
100. MAP1B ENSG00000131711 44568 1.598 0.870 0.728 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]

There are 220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA