Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSX1

Gene Name Gene ID Reads Annotation
MSX1 ENSG00000163132 2038 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]



Genes with expression patterns similar to MSX1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. MSX1 ENSG00000163132 2038 2 1.000 1.000 msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
2. WNT3A ENSG00000154342 267 1.867 0.937 0.930 Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
3. OLIG3 ENSG00000177468 918 1.835 0.894 0.941 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
4. WNT1 ENSG00000125084 1392 1.711 0.846 0.865 Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
5. AXIN2 ENSG00000168646 2778 1.679 0.831 0.848 axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
6. FZD10 ENSG00000111432 608 1.675 0.842 0.833 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
7. PRDM13 ENSG00000112238 312 1.642 0.833 0.809 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
8. SOX1 ENSG00000182968 1339 1.627 0.878 0.749 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
9. SYT2 ENSG00000143858 2364 1.608 0.867 0.741 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
10. WNT4 ENSG00000162552 957 1.595 0.799 0.796 Wnt family member 4 [Source:HGNC Symbol;Acc:HGNC:12783]
11. ZIC4 ENSG00000174963 2667 1.577 0.741 0.836 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
12. LFNG ENSG00000106003 1260 1.563 0.820 0.743 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
13. CCDC140 ENSG00000163081 233 1.563 0.742 0.821 coiled-coil domain containing 140 [Source:HGNC Symbol;Acc:HGNC:26514]
14. SP5 ENSG00000204335 211 1.562 0.813 0.749 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
15. ARL4A ENSG00000122644 3071 1.56 0.735 0.825 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
16. ZIC3 ENSG00000156925 420 1.532 0.737 0.795 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
17. CELSR1 ENSG00000075275 716 1.523 0.756 0.767 cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
18. RND2 ENSG00000108830 3761 1.523 0.764 0.759 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
19. LINC00461 ENSG00000245526 4465 1.513 0.753 0.760 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
20. FAM167A ENSG00000154319 299 1.511 0.768 0.743 family with sequence similarity 167 member A [Source:HGNC Symbol;Acc:HGNC:15549]
21. NPY2R ENSG00000185149 46 1.507 0.796 0.711 neuropeptide Y receptor Y2 [Source:HGNC Symbol;Acc:HGNC:7957]
22. FAM159B 132 1.496 0.710 0.786 family with sequence similarity 159 member B
23. NKD1 ENSG00000140807 2100 1.481 0.700 0.781 naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
24. CRABP1 ENSG00000166426 2178 1.479 0.744 0.735 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
25. DCC ENSG00000187323 538 1.465 0.737 0.728 DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
26. WSCD1 ENSG00000179314 1121 1.464 0.745 0.719 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
27. PAX3 ENSG00000135903 1126 1.464 0.717 0.747 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
28. RFX4 ENSG00000111783 1382 1.446 0.724 0.722 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
29. PLEKHG1 ENSG00000120278 1008 1.445 0.740 0.705 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
30. SOX2 ENSG00000181449 19791 1.441 0.732 0.709 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
31. ZIC1 ENSG00000152977 18260 1.429 0.729 0.700 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
32. KCNK10 ENSG00000100433 145 0.901 - 0.901 potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
33. SCUBE2 ENSG00000175356 1730 0.886 0.886 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
34. PTN ENSG00000105894 11178 0.864 0.864 - pleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]
35. C9orf135 ENSG00000204711 56 0.843 - 0.843 chromosome 9 open reading frame 135 [Source:HGNC Symbol;Acc:HGNC:31422]
36. FGFR2 ENSG00000066468 5677 0.832 0.832 - fibroblast growth factor receptor 2 [Source:HGNC Symbol;Acc:HGNC:3689]
37. GBX2 ENSG00000168505 227 0.827 0.827 - gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
38. TOX3 ENSG00000103460 1758 0.821 0.821 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
39. NEDD9 ENSG00000111859 1509 0.815 0.815 - neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
40. HES6 ENSG00000144485 4284 0.812 - 0.812 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
41. CCER2 ENSG00000262484, ENSG00000283099 118 0.81 - 0.810 coiled-coil glutamate rich protein 2 [Source:HGNC Symbol;Acc:HGNC:44662]
42. TKTL1 ENSG00000007350 1212 0.801 0.801 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
43. WNT10B ENSG00000169884 23 0.795 - 0.795 Wnt family member 10B [Source:HGNC Symbol;Acc:HGNC:12775]
44. LRP2 ENSG00000081479 1314 0.795 - 0.795 LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
45. LINC00925 LINC00925 517 0.793 0.793 -
46. DLL1 ENSG00000198719, ENSG00000275555 1642 0.793 - 0.793 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
47. SLC2A1 ENSG00000117394 2892 0.793 0.793 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
48. ILDR2 ENSG00000143195 321 0.792 - 0.792 immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
49. CNGA3 ENSG00000144191 70 0.787 - 0.787 cyclic nucleotide gated channel alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]
50. ADCYAP1R1 ENSG00000078549 321 0.786 - 0.786 ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]
51. FGFR3 ENSG00000068078 2862 0.785 0.785 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
52. HOXB-AS3 ENSG00000233101 1776 0.783 0.783 - HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
53. CASZ1 ENSG00000130940 401 0.776 - 0.776 castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
54. IGFBPL1 ENSG00000137142 3283 0.776 - 0.776 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
55. PTF1A ENSG00000168267 232 0.774 0.774 - pancreas associated transcription factor 1a [Source:HGNC Symbol;Acc:HGNC:23734]
56. ALOX15B ENSG00000179593 7 0.773 0.773 - arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:HGNC:434]
57. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.772 - 0.772 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
58. RPRML ENSG00000179673 96 0.765 - 0.765 reprimo like [Source:HGNC Symbol;Acc:HGNC:32422]
59. LINC00943 ENSG00000189238 30 0.759 - 0.759 long intergenic non-protein coding RNA 943 [Source:HGNC Symbol;Acc:HGNC:48639]
60. TOX ENSG00000198846 1208 0.759 0.759 - thymocyte selection associated high mobility group box [Source:HGNC Symbol;Acc:HGNC:18988]
61. HS6ST1 ENSG00000136720 4974 0.759 - 0.759 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
62. NCKAP5 ENSG00000176771 481 0.758 - 0.758 NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]
63. HES4 ENSG00000188290 745 0.756 0.756 - hes family bHLH transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:24149]
64. ZIC5 ENSG00000139800 441 0.753 0.753 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
65. CRNDE ENSG00000245694 3754 0.752 0.752 - colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
66. MLPH ENSG00000115648 37 0.746 0.746 - melanophilin [Source:HGNC Symbol;Acc:HGNC:29643]
67. ROBO3 ENSG00000154134 1085 0.739 0.739 - roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
68. APCDD1 ENSG00000154856 2448 0.737 - 0.737 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
69. TMEM132C ENSG00000181234 1913 0.734 - 0.734 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]
70. HAGLR ENSG00000224189 572 0.734 - 0.734 HOXD antisense growth-associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:43755]
71. STAC ENSG00000144681 259 0.733 0.733 - SH3 and cysteine rich domain [Source:HGNC Symbol;Acc:HGNC:11353]
72. NOTCH1 ENSG00000148400 5516 0.727 - 0.727 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
73. DCLK2 ENSG00000170390 3503 0.726 - 0.726 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
74. GAS1 ENSG00000180447 15160 0.725 - 0.725 growth arrest specific 1 [Source:HGNC Symbol;Acc:HGNC:4165]
75. HOXA1 ENSG00000105991 1454 0.72 0.720 - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
76. ID1 ENSG00000125968 25083 0.718 - 0.718 inhibitor of DNA binding 1, HLH protein [Source:HGNC Symbol;Acc:HGNC:5360]
77. ADCY2 ENSG00000078295 722 0.718 0.718 - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
78. GLDC ENSG00000178445 513 0.716 - 0.716 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
79. RARRES2 ENSG00000106538 1806 0.716 0.716 - retinoic acid receptor responder 2 [Source:HGNC Symbol;Acc:HGNC:9868]
80. WDR54 ENSG00000005448 1824 0.713 0.713 - WD repeat domain 54 [Source:HGNC Symbol;Acc:HGNC:25770]
81. CERCAM ENSG00000167123 1800 0.713 - 0.713 cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
82. ADGRG1 ENSG00000205336 800 0.711 - 0.711 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
83. WASF3 ENSG00000132970 6777 0.71 0.710 - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
84. SLC1A2 ENSG00000110436 1231 0.709 0.709 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
85. FAM19A4 ENSG00000163377 48 0.709 0.709 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
86. DIO3 ENSG00000197406 176 0.706 - 0.706 iodothyronine deiodinase 3 [Source:HGNC Symbol;Acc:HGNC:2885]
87. LINC00682 ENSG00000245870 21 0.706 0.706 - long intergenic non-protein coding RNA 682 [Source:HGNC Symbol;Acc:HGNC:44466]
88. CCDC85C ENSG00000205476 3808 0.705 - 0.705 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
89. CAMK2N2 ENSG00000163888 88 0.705 - 0.705 calcium/calmodulin dependent protein kinase II inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:24197]
90. HOXC5 ENSG00000172789, ENSG00000273046 4001 0.702 0.702 - homeobox C5 [Source:NCBI gene;Acc:3222]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA