Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01158

Gene Name Gene ID Reads Annotation
LINC01158 1332 long intergenic non-protein coding RNA 1158, transcript variant 4



Genes with expression patterns similar to LINC01158

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01158 1332 2 1.000 1.000 long intergenic non-protein coding RNA 1158, transcript variant 4
2. KLHDC8A ENSG00000162873 2265 1.788 0.866 0.922 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
3. DPYSL5 ENSG00000157851 6855 1.779 0.890 0.889 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
4. FAM181A ENSG00000140067, ENSG00000273533 1757 1.775 0.859 0.916 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
5. CKB ENSG00000166165 54181 1.773 0.881 0.892 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
6. HES5 ENSG00000197921, ENSG00000273529 9293 1.77 0.861 0.909 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
7. RHBDL3 ENSG00000141314 2571 1.763 0.864 0.899 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
8. SOX3 ENSG00000134595 5297 1.762 0.845 0.917 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
9. PAX6 ENSG00000007372 3710 1.75 0.827 0.923 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
10. NRARP ENSG00000198435 1658 1.749 0.850 0.899 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
11. CELSR2 ENSG00000143126 3566 1.74 0.846 0.894 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
12. POU3F2 ENSG00000184486 2683 1.737 0.845 0.892 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
13. PDPN ENSG00000162493 5095 1.735 0.831 0.904 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
14. MYCL ENSG00000116990 1128 1.718 0.837 0.881 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
15. PLP1 ENSG00000123560 2266 1.712 0.846 0.866 proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]
16. FGFBP3 ENSG00000174721 4234 1.71 0.861 0.849 fibroblast growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:23428]
17. DTX4 ENSG00000110042 2639 1.702 0.841 0.861 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
18. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.69 0.871 0.819 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
19. NEUROG1 ENSG00000181965 1244 1.68 0.818 0.862 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
20. MIR124-2HG ENSG00000254377 940 1.66 0.832 0.828 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
21. SYT11 ENSG00000132718 3832 1.658 0.816 0.842 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
22. NHLH1 ENSG00000171786 4811 1.655 0.789 0.866 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
23. LOC100240734 1898 1.654 0.792 0.862 uncharacterized LOC100240734
24. NHLH2 ENSG00000177551 1191 1.639 0.759 0.880 nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
25. TMEM132B ENSG00000139364 1165 1.635 0.886 0.749 transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
26. CSPG5 ENSG00000114646 558 1.633 0.780 0.853 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
27. SRGAP3 ENSG00000196220 5297 1.632 0.740 0.892 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
28. TSPAN18 ENSG00000157570 9391 1.626 0.802 0.824 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
29. RGMA ENSG00000182175 3405 1.622 0.782 0.840 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
30. SEMA5B ENSG00000082684 2716 1.618 0.766 0.852 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
31. GREB1 ENSG00000196208 4256 1.617 0.851 0.766 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
32. CXCR4 ENSG00000121966 4708 1.617 0.812 0.805 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
33. SOX2 ENSG00000181449 19791 1.612 0.776 0.836 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
34. OLFM1 ENSG00000130558 1162 1.61 0.810 0.800 olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
35. HOXB-AS3 ENSG00000233101 1776 1.603 0.722 0.881 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
36. CPLX2 ENSG00000145920 573 1.602 0.797 0.805 complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
37. CALCB ENSG00000175868 1967 1.598 0.784 0.814 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
38. SLC1A2 ENSG00000110436 1231 1.597 0.730 0.867 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
39. LAMP5 ENSG00000125869 710 1.595 0.764 0.831 lysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
40. LOC440896 652 1.595 0.824 0.771 uncharacterized LOC440896
41. ST18 ENSG00000147488 547 1.595 0.740 0.855 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
42. AGO1 ENSG00000092847 2525 1.592 0.740 0.852 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
43. MAP1B ENSG00000131711 44568 1.591 0.811 0.780 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
44. IGFBPL1 ENSG00000137142 3283 1.589 0.812 0.777 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
45. LRIG1 ENSG00000144749, ENSG00000282243 1639 1.586 0.761 0.825 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
46. MIAT ENSG00000225783 2977 1.58 0.776 0.804 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
47. FMN2 ENSG00000155816 1062 1.58 0.796 0.784 formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
48. TAGLN3 ENSG00000144834 10185 1.575 0.792 0.783 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
49. SLITRK2 ENSG00000185985 905 1.571 0.826 0.745 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
50. OTP ENSG00000171540 179 1.567 0.744 0.823 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
51. LINC00461 ENSG00000245526 4465 1.561 0.747 0.814 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
52. DPYSL2 ENSG00000092964 47074 1.559 0.787 0.772 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
53. TUBB2B ENSG00000137285 35642 1.551 0.753 0.798 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
54. C8orf46 375 1.551 0.752 0.799 chromosome 8 open reading frame 46
55. INSM1 ENSG00000173404 3113 1.55 0.735 0.815 INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]
56. NOVA1 ENSG00000139910 5990 1.544 0.731 0.813 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
57. COTL1 ENSG00000103187 30280 1.543 0.761 0.782 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
58. CAMKV ENSG00000164076 400 1.542 0.743 0.799 CaM kinase like vesicle associated [Source:HGNC Symbol;Acc:HGNC:28788]
59. NES ENSG00000132688 20034 1.542 0.729 0.813 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
60. DLL1 ENSG00000198719, ENSG00000275555 1642 1.542 0.838 0.704 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
61. JAM2 ENSG00000154721 1771 1.54 0.747 0.793 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
62. SLC2A1 ENSG00000117394 2892 1.539 0.724 0.815 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
63. GLDC ENSG00000178445 513 1.529 0.767 0.762 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
64. CDH4 ENSG00000179242, ENSG00000280641 1069 1.522 0.714 0.808 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
65. GNG4 ENSG00000168243, ENSG00000282972 1085 1.514 0.776 0.738 G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
66. STMN3 ENSG00000197457 2808 1.499 0.784 0.715 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
67. PRDM12 ENSG00000130711 720 1.494 0.714 0.780 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
68. CRNDE ENSG00000245694 3754 1.492 0.709 0.783 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
69. FAM110A ENSG00000125898 656 1.491 0.739 0.752 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
70. DPYSL3 ENSG00000113657 7319 1.49 0.720 0.770 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
71. KLF13 ENSG00000169926, ENSG00000275746 3783 1.483 0.710 0.773 Kruppel like factor 13 [Source:NCBI gene;Acc:51621]
72. NEUROD4 ENSG00000123307 377 1.481 0.728 0.753 neuronal differentiation 4 [Source:HGNC Symbol;Acc:HGNC:13802]
73. TUBA1A ENSG00000167552 83799 1.479 0.743 0.736 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
74. NEUROG2 ENSG00000178403 514 1.476 0.753 0.723 neurogenin 2 [Source:HGNC Symbol;Acc:HGNC:13805]
75. HES6 ENSG00000144485 4284 1.474 0.760 0.714 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
76. GNG3 ENSG00000162188 958 1.474 0.770 0.704 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
77. ACOT7 ENSG00000097021 9034 1.474 0.754 0.720 acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
78. NOTCH1 ENSG00000148400 5516 1.467 0.754 0.713 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
79. CALM1 ENSG00000198668 24434 1.467 0.758 0.709 calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
80. SCRT2 ENSG00000215397 343 1.464 0.703 0.761 scratch family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:15952]
81. RNF165 ENSG00000141622 1865 1.464 0.737 0.727 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
82. CNTN2 ENSG00000184144 4674 1.451 0.702 0.749 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
83. CNIH2 ENSG00000174871 3037 1.44 0.702 0.738 cornichon family AMPA receptor auxiliary protein 2 [Source:HGNC Symbol;Acc:HGNC:28744]
84. HEYL ENSG00000163909 2647 1.44 0.720 0.720 hes related family bHLH transcription factor with YRPW motif-like [Source:HGNC Symbol;Acc:HGNC:4882]
85. MSI1 ENSG00000135097 6935 1.437 0.710 0.727 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
86. BCAR3 ENSG00000137936 2774 1.434 0.715 0.719 BCAR3, NSP family adaptor protein [Source:HGNC Symbol;Acc:HGNC:973]
87. PHYHIPL ENSG00000165443 474 1.433 0.703 0.730 phytanoyl-CoA 2-hydroxylase interacting protein like [Source:HGNC Symbol;Acc:HGNC:29378]
88. PHF21B ENSG00000056487 2704 1.427 0.700 0.727 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
89. TUBB3 ENSG00000258947 53998 1.423 0.700 0.723 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
90. RGS20 ENSG00000147509 282 0.895 - 0.895 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
91. CTNND2 ENSG00000169862 1640 0.893 0.893 - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
92. FGF19 ENSG00000162344 241 0.885 - 0.885 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
93. ASRGL1 ENSG00000162174 4293 0.881 - 0.881 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
94. IRX5 ENSG00000176842 2175 0.854 - 0.854 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
95. SLC35F1 ENSG00000196376 658 0.846 - 0.846 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
96. TMEM176B ENSG00000106565 1876 0.842 - 0.842 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
97. RND2 ENSG00000108830 3761 0.838 - 0.838 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
98. LHX5-AS1 ENSG00000257935 271 0.836 - 0.836 LHX5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49570]
99. PTPRZ1 ENSG00000106278 1326 0.836 - 0.836 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
100. NRIP3 ENSG00000175352 238 0.835 - 0.835 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]

There are 119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA