Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00925

Gene Name Gene ID Reads Annotation
LINC00925 LINC00925 517



Genes with expression patterns similar to LINC00925

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00925 LINC00925 517 2 1.000 1.000
2. LFNG ENSG00000106003 1260 1.759 0.865 0.894 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
3. RND2 ENSG00000108830 3761 1.73 0.901 0.829 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
4. LINC00461 ENSG00000245526 4465 1.729 0.866 0.863 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
5. MIAT ENSG00000225783 2977 1.708 0.846 0.862 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
6. IGFBPL1 ENSG00000137142 3283 1.683 0.836 0.847 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
7. HES6 ENSG00000144485 4284 1.683 0.857 0.826 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
8. SOX2 ENSG00000181449 19791 1.68 0.852 0.828 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
9. SRGAP3 ENSG00000196220 5297 1.669 0.819 0.850 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
10. RHBDL3 ENSG00000141314 2571 1.666 0.810 0.856 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
11. SOX1 ENSG00000182968 1339 1.665 0.888 0.777 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
12. DLL1 ENSG00000198719, ENSG00000275555 1642 1.642 0.815 0.827 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
13. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 1.64 0.791 0.849 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
14. SYT2 ENSG00000143858 2364 1.635 0.809 0.826 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
15. CELSR2 ENSG00000143126 3566 1.634 0.796 0.838 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
16. HES5 ENSG00000197921, ENSG00000273529 9293 1.633 0.789 0.844 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
17. CKB ENSG00000166165 54181 1.632 0.792 0.840 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
18. CRABP1 ENSG00000166426 2178 1.628 0.828 0.800 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
19. FAM181A ENSG00000140067, ENSG00000273533 1757 1.627 0.807 0.820 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
20. SOX3 ENSG00000134595 5297 1.617 0.822 0.795 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
21. NRARP ENSG00000198435 1658 1.616 0.810 0.806 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
22. POU3F2 ENSG00000184486 2683 1.614 0.779 0.835 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
23. ZIC1 ENSG00000152977 18260 1.613 0.875 0.738 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
24. ASRGL1 ENSG00000162174 4293 1.607 0.811 0.796 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
25. HOXB-AS3 ENSG00000233101 1776 1.597 0.839 0.758 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
26. CCDC85C ENSG00000205476 3808 1.592 0.808 0.784 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
27. FAM181B ENSG00000182103 461 1.587 0.815 0.772 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
28. SLC2A1 ENSG00000117394 2892 1.578 0.801 0.777 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
29. PTPRZ1 ENSG00000106278 1326 1.578 0.788 0.790 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
30. FGFR3 ENSG00000068078 2862 1.576 0.857 0.719 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
31. ZIC4 ENSG00000174963 2667 1.574 0.831 0.743 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
32. SCUBE2 ENSG00000175356 1730 1.552 0.801 0.751 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
33. NES ENSG00000132688 20034 1.548 0.745 0.803 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
34. MYCL ENSG00000116990 1128 1.539 0.723 0.816 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
35. ARL4A ENSG00000122644 3071 1.534 0.779 0.755 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
36. TSPAN18 ENSG00000157570 9391 1.533 0.770 0.763 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
37. CDH4 ENSG00000179242, ENSG00000280641 1069 1.529 0.768 0.761 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
38. DTX4 ENSG00000110042 2639 1.524 0.748 0.776 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
39. HS6ST1 ENSG00000136720 4974 1.513 0.746 0.767 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
40. FLJ12825 ENSG00000248265 822 1.513 0.783 0.730 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
41. RGS16 ENSG00000143333 2239 1.501 0.719 0.782 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
42. SLC1A2 ENSG00000110436 1231 1.498 0.736 0.762 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
43. PDPN ENSG00000162493 5095 1.494 0.755 0.739 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
44. RASSF2 ENSG00000101265 1157 1.485 0.705 0.780 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
45. JAM2 ENSG00000154721 1771 1.478 0.703 0.775 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
46. MSI1 ENSG00000135097 6935 1.467 0.726 0.741 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
47. TKTL1 ENSG00000007350 1212 1.457 0.751 0.706 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
48. WSCD1 ENSG00000179314 1121 1.453 0.730 0.723 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
49. TMEM176B ENSG00000106565 1876 1.452 0.721 0.731 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
50. GBX2 ENSG00000168505 227 1.443 0.719 0.724 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
51. APCDD1 ENSG00000154856 2448 1.432 0.725 0.707 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
52. OLMALINC ENSG00000235823 4999 1.418 0.716 0.702 oligodendrocyte maturation-associated long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28060]
53. PAK3 ENSG00000077264 890 0.904 0.904 - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
54. ADD2 ENSG00000075340 810 0.873 0.873 - adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
55. HES4 ENSG00000188290 745 0.868 0.868 - hes family bHLH transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:24149]
56. MIR124-2HG ENSG00000254377 940 0.861 - 0.861 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
57. SEMA5B ENSG00000082684 2716 0.859 - 0.859 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
58. DCC ENSG00000187323 538 0.859 0.859 - DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
59. TOX3 ENSG00000103460 1758 0.859 0.859 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
60. ROBO3 ENSG00000154134 1085 0.85 - 0.850 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
61. FZD3 ENSG00000104290 11650 0.831 0.831 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
62. LOC100240734 1898 0.83 - 0.830 uncharacterized LOC100240734
63. SP5 ENSG00000204335 211 0.825 0.825 - Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
64. ZIC2 ENSG00000043355 4457 0.82 0.820 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
65. WNT3A ENSG00000154342 267 0.816 0.816 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
66. NPY2R ENSG00000185149 46 0.813 0.813 - neuropeptide Y receptor Y2 [Source:HGNC Symbol;Acc:HGNC:7957]
67. PCDH8 ENSG00000136099 203 0.806 - 0.806 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
68. WDR54 ENSG00000005448 1824 0.802 0.802 - WD repeat domain 54 [Source:HGNC Symbol;Acc:HGNC:25770]
69. DPYSL5 ENSG00000157851 6855 0.802 - 0.802 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
70. GLDC ENSG00000178445 513 0.799 - 0.799 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
71. ZIC5 ENSG00000139800 441 0.799 0.799 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
72. MSX1 ENSG00000163132 2038 0.793 0.793 - msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
73. SYT11 ENSG00000132718 3832 0.793 - 0.793 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
74. CXCR4 ENSG00000121966 4708 0.791 - 0.791 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
75. ADGRG1 ENSG00000205336 800 0.789 - 0.789 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
76. BRSK2 ENSG00000174672 282 0.786 - 0.786 BR serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:11405]
77. DOCK3 ENSG00000088538 169 0.785 - 0.785 dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:HGNC:2989]
78. SALL1 ENSG00000103449 458 0.785 0.785 - spalt like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10524]
79. LRRN1 ENSG00000175928 3973 0.785 0.785 - leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:HGNC:20980]
80. CSPG5 ENSG00000114646 558 0.783 - 0.783 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
81. KIF21A ENSG00000139116 4975 0.783 0.783 - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
82. ZBTB16 ENSG00000109906 287 0.78 - 0.780 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
83. MAP6 ENSG00000171533 1692 0.778 - 0.778 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
84. TMEM158 ENSG00000249992 678 0.776 0.776 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
85. ENPP2 ENSG00000136960 3320 0.772 0.772 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:3357]
86. HOXB2 ENSG00000173917 6040 0.771 0.771 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
87. GREB1 ENSG00000196208 4256 0.771 - 0.771 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
88. NOTCH1 ENSG00000148400 5516 0.77 - 0.770 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
89. HOXC9 ENSG00000180806 3191 0.769 - 0.769 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
90. RGS20 ENSG00000147509 282 0.768 - 0.768 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
91. IRX5 ENSG00000176842 2175 0.765 - 0.765 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
92. TMEM257 484 0.765 0.765 - transmembrane protein 257
93. KLHDC8A ENSG00000162873 2265 0.764 - 0.764 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
94. LINC01158 1332 0.763 - 0.763 long intergenic non-protein coding RNA 1158, transcript variant 4
95. CECR2 ENSG00000099954 2223 0.762 0.762 - CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
96. NOVA1 ENSG00000139910 5990 0.76 - 0.760 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
97. RFX4 ENSG00000111783 1382 0.76 0.760 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
98. NELL2 ENSG00000184613 1519 0.76 - 0.760 neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]
99. TMEM176A ENSG00000002933 854 0.754 - 0.754 transmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]
100. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.753 - 0.753 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]

There are 60 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA