Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IRX3

Gene Name Gene ID Reads Annotation
IRX3 ENSG00000177508 7140 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]



Genes with expression patterns similar to IRX3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. IRX3 ENSG00000177508 7140 2 1.000 1.000 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
2. IRX5 ENSG00000176842 2175 1.678 0.807 0.871 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
3. ARL4C ENSG00000188042 5437 1.596 0.811 0.785 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
4. SLC1A2 ENSG00000110436 1231 0.848 - 0.848 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
5. HES5 ENSG00000197921, ENSG00000273529 9293 0.844 - 0.844 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
6. PDPN ENSG00000162493 5095 0.841 - 0.841 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
7. NRARP ENSG00000198435 1658 0.835 - 0.835 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
8. SOX3 ENSG00000134595 5297 0.835 - 0.835 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
9. PAX6 ENSG00000007372 3710 0.828 - 0.828 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
10. TKTL1 ENSG00000007350 1212 0.827 - 0.827 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
11. SCUBE2 ENSG00000175356 1730 0.826 - 0.826 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
12. TSPAN18 ENSG00000157570 9391 0.825 - 0.825 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
13. FAM181A ENSG00000140067, ENSG00000273533 1757 0.816 - 0.816 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
14. CCND1 ENSG00000110092 8014 0.815 - 0.815 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
15. RGS20 ENSG00000147509 282 0.815 - 0.815 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
16. SLC2A1 ENSG00000117394 2892 0.806 - 0.806 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
17. CRNDE ENSG00000245694 3754 0.805 - 0.805 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
18. RHBDL3 ENSG00000141314 2571 0.803 - 0.803 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
19. MYCL ENSG00000116990 1128 0.803 - 0.803 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
20. CELSR2 ENSG00000143126 3566 0.802 - 0.802 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
21. SEMA5B ENSG00000082684 2716 0.801 - 0.801 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
22. HOXB-AS3 ENSG00000233101 1776 0.798 - 0.798 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
23. ROBO3 ENSG00000154134 1085 0.793 - 0.793 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
24. NRIP3 ENSG00000175352 238 0.792 - 0.792 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
25. CSPG5 ENSG00000114646 558 0.787 - 0.787 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
26. LINC01158 1332 0.786 - 0.786 long intergenic non-protein coding RNA 1158, transcript variant 4
27. POU3F2 ENSG00000184486 2683 0.786 - 0.786 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
28. RGMA ENSG00000182175 3405 0.782 - 0.782 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
29. FAM107A ENSG00000168309 211 0.782 - 0.782 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
30. CDH4 ENSG00000179242, ENSG00000280641 1069 0.782 - 0.782 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
31. DTX4 ENSG00000110042 2639 0.782 - 0.782 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
32. LOC100240734 1898 0.78 - 0.780 uncharacterized LOC100240734
33. CKB ENSG00000166165 54181 0.776 - 0.776 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
34. SYT2 ENSG00000143858 2364 0.775 - 0.775 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
35. GBX2 ENSG00000168505 227 0.774 - 0.774 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
36. WSCD1 ENSG00000179314 1121 0.771 - 0.771 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
37. IGDCC3 ENSG00000174498 26431 0.769 - 0.769 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
38. FGFR3 ENSG00000068078 2862 0.769 - 0.769 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
39. PTPRZ1 ENSG00000106278 1326 0.768 - 0.768 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
40. CCDC85C ENSG00000205476 3808 0.763 - 0.763 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
41. SRGAP3 ENSG00000196220 5297 0.762 - 0.762 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
42. NEUROG1 ENSG00000181965 1244 0.762 - 0.762 neurogenin 1 [Source:HGNC Symbol;Acc:HGNC:7764]
43. AGO1 ENSG00000092847 2525 0.759 - 0.759 argonaute 1, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3262]
44. MSI1 ENSG00000135097 6935 0.755 - 0.755 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
45. SOX2 ENSG00000181449 19791 0.751 - 0.751 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
46. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.749 - 0.749 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
47. KLHDC8A ENSG00000162873 2265 0.747 - 0.747 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
48. ID1 ENSG00000125968 25083 0.747 0.747 - inhibitor of DNA binding 1, HLH protein [Source:HGNC Symbol;Acc:HGNC:5360]
49. CLEC18B ENSG00000140839 171 0.746 0.746 - C-type lectin domain family 18 member B [Source:HGNC Symbol;Acc:HGNC:33849]
50. HOXD3 ENSG00000128652 1324 0.744 - 0.744 homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
51. DPYSL5 ENSG00000157851 6855 0.743 - 0.743 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
52. ASRGL1 ENSG00000162174 4293 0.743 - 0.743 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
53. LINC01159 ENSG00000229743 210 0.743 - 0.743 long intergenic non-protein coding RNA 1159 [Source:HGNC Symbol;Acc:HGNC:49514]
54. FZD10-AS1 1074 0.742 - 0.742 FZD10 antisense RNA 1 (head to head)
55. ZNF48 ENSG00000180035 2149 0.739 - 0.739 zinc finger protein 48 [Source:HGNC Symbol;Acc:HGNC:13114]
56. UCP2 ENSG00000175567 1141 0.739 - 0.739 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
57. NUAK2 ENSG00000163545 538 0.738 - 0.738 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
58. SOX1 ENSG00000182968 1339 0.737 - 0.737 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
59. CLDN11 ENSG00000013297 7397 0.737 - 0.737 claudin 11 [Source:HGNC Symbol;Acc:HGNC:8514]
60. GPRC5B ENSG00000167191 684 0.736 - 0.736 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
61. RND2 ENSG00000108830 3761 0.735 - 0.735 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
62. NOTCH1 ENSG00000148400 5516 0.73 - 0.730 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
63. LINC00461 ENSG00000245526 4465 0.726 - 0.726 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
64. FGF19 ENSG00000162344 241 0.726 - 0.726 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]
65. PAX3 ENSG00000135903 1126 0.725 - 0.725 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
66. FAM181B ENSG00000182103 461 0.725 - 0.725 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
67. LFNG ENSG00000106003 1260 0.724 - 0.724 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
68. SLC6A8 ENSG00000130821 1625 0.724 - 0.724 solute carrier family 6 member 8 [Source:HGNC Symbol;Acc:HGNC:11055]
69. ADGRG2 ENSG00000173698 87 0.723 - 0.723 adhesion G protein-coupled receptor G2 [Source:HGNC Symbol;Acc:HGNC:4516]
70. RASSF2 ENSG00000101265 1157 0.719 - 0.719 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
71. BHLHE22 ENSG00000180828 179 0.717 - 0.717 basic helix-loop-helix family member e22 [Source:HGNC Symbol;Acc:HGNC:11963]
72. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.714 - 0.714 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
73. FLJ12825 ENSG00000248265 822 0.713 - 0.713 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
74. PAX7 ENSG00000009709 810 0.712 - 0.712 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
75. HOXB9 ENSG00000170689 2051 0.712 - 0.712 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
76. TOX3 ENSG00000103460 1758 0.711 - 0.711 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
77. SLITRK2 ENSG00000185985 905 0.711 - 0.711 SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
78. IRX2 ENSG00000170561 2135 0.711 0.711 - iroquois homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14359]
79. NES ENSG00000132688 20034 0.71 - 0.710 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
80. OTP ENSG00000171540 179 0.71 - 0.710 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
81. INSM1 ENSG00000173404 3113 0.709 - 0.709 INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]
82. GLDC ENSG00000178445 513 0.708 - 0.708 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
83. PCDH8 ENSG00000136099 203 0.707 - 0.707 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
84. LOC400043 4859 0.705 - 0.705 uncharacterized LOC400043
85. ZBTB16 ENSG00000109906 287 0.701 - 0.701 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA