Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXC9

Gene Name Gene ID Reads Annotation
HOXC9 ENSG00000180806 3191 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]



Genes with expression patterns similar to HOXC9

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. HOXC9 ENSG00000180806 3191 2 1.000 1.000 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
2. TUBB2B ENSG00000137285 35642 1.767 0.819 0.948 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
3. MAP1B ENSG00000131711 44568 1.757 0.839 0.918 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
4. TAGLN3 ENSG00000144834 10185 1.742 0.806 0.936 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
5. TUBA1A ENSG00000167552 83799 1.739 0.832 0.907 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
6. CNTN2 ENSG00000184144 4674 1.729 0.821 0.908 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
7. CXCR4 ENSG00000121966 4708 1.723 0.792 0.931 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
8. TUBB3 ENSG00000258947 53998 1.722 0.822 0.900 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
9. DPYSL3 ENSG00000113657 7319 1.705 0.833 0.872 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
10. DPYSL2 ENSG00000092964 47074 1.702 0.814 0.888 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
11. RGS16 ENSG00000143333 2239 1.699 0.820 0.879 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
12. ENO2 ENSG00000111674 2931 1.699 0.814 0.885 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
13. DPYSL5 ENSG00000157851 6855 1.696 0.757 0.939 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
14. CRMP1 ENSG00000072832 9692 1.696 0.825 0.871 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
15. MAP2 ENSG00000078018 3573 1.693 0.803 0.890 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
16. PHF21B ENSG00000056487 2704 1.677 0.763 0.914 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
17. MAP6 ENSG00000171533 1692 1.66 0.760 0.900 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
18. ELAVL3 ENSG00000196361 2164 1.657 0.785 0.872 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
19. SRRM4 ENSG00000139767 1060 1.656 0.807 0.849 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
20. APC2 ENSG00000115266 1420 1.653 0.809 0.844 APC2, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:24036]
21. ST18 ENSG00000147488 547 1.65 0.747 0.903 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
22. STMN3 ENSG00000197457 2808 1.646 0.782 0.864 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
23. NCAN ENSG00000130287 1136 1.639 0.727 0.912 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
24. SYT11 ENSG00000132718 3832 1.635 0.751 0.884 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
25. CALCB ENSG00000175868 1967 1.629 0.765 0.864 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
26. GNG4 ENSG00000168243, ENSG00000282972 1085 1.627 0.757 0.870 G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
27. KLHL35 ENSG00000149243 877 1.613 0.728 0.885 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
28. TUBB2A ENSG00000137267 4508 1.61 0.803 0.807 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
29. Sep-03 Sep-03 2608 1.605 0.779 0.826
30. LINC00599 ENSG00000253230, ENSG00000284859 293 1.598 0.758 0.840 long intergenic non-protein coding RNA 599 [Source:HGNC Symbol;Acc:HGNC:27231]
31. ELAVL4 ENSG00000162374 5082 1.597 0.762 0.835 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
32. KIF1A ENSG00000130294 2920 1.594 0.794 0.800 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
33. NHLH2 ENSG00000177551 1191 1.59 0.733 0.857 nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
34. FAM219A ENSG00000164970 1747 1.584 0.738 0.846 family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
35. GDI1 ENSG00000203879 6108 1.583 0.779 0.804 GDP dissociation inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:4226]
36. MIR124-2HG ENSG00000254377 940 1.581 0.721 0.860 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
37. MIAT ENSG00000225783 2977 1.581 0.739 0.842 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
38. OLFM1 ENSG00000130558 1162 1.581 0.768 0.813 olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
39. ACOT7 ENSG00000097021 9034 1.58 0.772 0.808 acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
40. CALM1 ENSG00000198668 24434 1.579 0.807 0.772 calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
41. KLHDC8A ENSG00000162873 2265 1.576 0.726 0.850 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
42. STMN4 ENSG00000015592 748 1.565 0.739 0.826 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
43. SYT1 ENSG00000067715 4379 1.559 0.816 0.743 synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
44. CEND1 ENSG00000184524 300 1.555 0.776 0.779 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
45. MYT1 ENSG00000196132, ENSG00000276876 1089 1.552 0.796 0.756 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
46. SRGAP3 ENSG00000196220 5297 1.548 0.701 0.847 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
47. NELL2 ENSG00000184613 1519 1.543 0.740 0.803 neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]
48. REEP2 ENSG00000132563 586 1.532 0.758 0.774 receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
49. COTL1 ENSG00000103187 30280 1.53 0.707 0.823 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
50. NEUROG2 ENSG00000178403 514 1.526 0.726 0.800 neurogenin 2 [Source:HGNC Symbol;Acc:HGNC:13805]
51. DLL3 ENSG00000090932 826 1.524 0.780 0.744 delta like canonical Notch ligand 3 [Source:HGNC Symbol;Acc:HGNC:2909]
52. KIF21B ENSG00000116852 3406 1.523 0.764 0.759 kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
53. GPM6A ENSG00000150625 911 1.518 0.780 0.738 glycoprotein M6A [Source:HGNC Symbol;Acc:HGNC:4460]
54. NRG1 ENSG00000157168 516 1.516 0.750 0.766 neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]
55. HN1 33065 1.512 0.711 0.801 hematological and neurological expressed 1, transcript variant 7
56. TRIM36 ENSG00000152503 452 1.51 0.794 0.716 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
57. C16orf45 ENSG00000166780, ENSG00000278823 4846 1.51 0.708 0.802 chromosome 16 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:19213]
58. POU2F2 ENSG00000028277 2245 1.505 0.738 0.767 POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]
59. CPLX2 ENSG00000145920 573 1.502 0.762 0.740 complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
60. GREB1 ENSG00000196208 4256 1.501 0.709 0.792 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
61. STMN1 ENSG00000117632 151617 1.497 0.758 0.739 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
62. RTN1 ENSG00000139970 4545 1.49 0.759 0.731 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
63. INA ENSG00000148798 12811 1.484 0.762 0.722 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
64. CAMK2N1 ENSG00000162545 10727 1.483 0.720 0.763 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
65. KIF5C ENSG00000168280, ENSG00000276734 1294 1.477 0.741 0.736 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
66. UBE2QL1 ENSG00000215218 1320 1.475 0.707 0.768 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]
67. TERF2IP ENSG00000166848 18929 1.473 0.737 0.736 TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
68. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 1.472 0.754 0.718 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
69. NPTX2 ENSG00000106236 199 1.472 0.750 0.722 neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
70. CDK5R1 ENSG00000176749 4151 1.47 0.741 0.729 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
71. SNCG ENSG00000173267 1866 1.469 0.763 0.706 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
72. GDAP1L1 ENSG00000124194 1388 1.466 0.730 0.736 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
73. HMP19 643 1.46 0.758 0.702 HMP19 protein
74. UCHL1 ENSG00000154277 28345 1.455 0.727 0.728 ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
75. RUNDC3A ENSG00000108309 522 1.446 0.708 0.738 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
76. PCBP4 ENSG00000090097 1943 1.441 0.709 0.732 poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
77. ATP1A3 ENSG00000105409 428 1.44 0.726 0.714 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
78. LOC101929563 1404 1.44 0.706 0.734 uncharacterized LOC101929563
79. SCRT1 ENSG00000261678, ENSG00000284923 207 1.435 0.703 0.732 scratch family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:15950]
80. DBNDD1 ENSG00000003249 1043 1.435 0.733 0.702 dysbindin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28455]
81. PNMA2 ENSG00000240694 835 1.416 0.712 0.704 PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]
82. CKB ENSG00000166165 54181 0.907 - 0.907 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
83. TMEM176A ENSG00000002933 854 0.903 - 0.903 transmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]
84. BSN ENSG00000164061 737 0.889 - 0.889 bassoon presynaptic cytomatrix protein [Source:HGNC Symbol;Acc:HGNC:1117]
85. ADD2 ENSG00000075340 810 0.883 - 0.883 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
86. TMEM176B ENSG00000106565 1876 0.882 - 0.882 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
87. NES ENSG00000132688 20034 0.879 - 0.879 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
88. GNG3 ENSG00000162188 958 0.875 - 0.875 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
89. IGFBPL1 ENSG00000137142 3283 0.873 - 0.873 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
90. NOVA1 ENSG00000139910 5990 0.865 - 0.865 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
91. NHLH1 ENSG00000171786 4811 0.865 - 0.865 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
92. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.861 - 0.861 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
93. CELSR2 ENSG00000143126 3566 0.861 - 0.861 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
94. MYO16 ENSG00000041515, ENSG00000282848 506 0.861 - 0.861 myosin XVI [Source:HGNC Symbol;Acc:HGNC:29822]
95. ASRGL1 ENSG00000162174 4293 0.859 - 0.859 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
96. HOXD3 ENSG00000128652 1324 0.856 - 0.856 homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
97. ADGRG1 ENSG00000205336 800 0.85 - 0.850 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
98. PRR36 ENSG00000183248 485 0.848 - 0.848 proline rich 36 [Source:HGNC Symbol;Acc:HGNC:26172]
99. KLC1 ENSG00000126214 6387 0.847 - 0.847 kinesin light chain 1 [Source:HGNC Symbol;Acc:HGNC:6387]
100. POU3F2 ENSG00000184486 2683 0.844 - 0.844 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]

There are 201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA