Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GBX2

Gene Name Gene ID Reads Annotation
GBX2 ENSG00000168505 227 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]



Genes with expression patterns similar to GBX2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. GBX2 ENSG00000168505 227 2 1.000 1.000 gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
2. SOX1 ENSG00000182968 1339 1.657 0.714 0.943 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
3. SCUBE2 ENSG00000175356 1730 1.628 0.703 0.925 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
4. SLC2A1 ENSG00000117394 2892 1.569 0.723 0.846 solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
5. LFNG ENSG00000106003 1260 1.553 0.750 0.803 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
6. TOX3 ENSG00000103460 1758 1.548 0.744 0.804 TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
7. SP5 ENSG00000204335 211 1.507 0.764 0.743 Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]
8. FAM159B 132 1.492 0.728 0.764 family with sequence similarity 159 member B
9. LINC00925 LINC00925 517 1.443 0.719 0.724
10. TKTL1 ENSG00000007350 1212 0.935 - 0.935 transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
11. WSCD1 ENSG00000179314 1121 0.923 - 0.923 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
12. SYT2 ENSG00000143858 2364 0.909 - 0.909 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
13. PRDM13 ENSG00000112238 312 0.898 - 0.898 PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
14. SOX2 ENSG00000181449 19791 0.881 - 0.881 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
15. ARL4A ENSG00000122644 3071 0.879 - 0.879 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
16. LOC100240734 1898 0.878 - 0.878 uncharacterized LOC100240734
17. POU3F2 ENSG00000184486 2683 0.874 - 0.874 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
18. RHBDL3 ENSG00000141314 2571 0.87 - 0.870 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
19. RASSF2 ENSG00000101265 1157 0.866 - 0.866 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
20. CCDC85C ENSG00000205476 3808 0.865 - 0.865 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
21. SLC1A2 ENSG00000110436 1231 0.864 - 0.864 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
22. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.862 - 0.862 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
23. PAX3 ENSG00000135903 1126 0.861 - 0.861 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
24. ALOX15B ENSG00000179593 7 0.859 0.859 - arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:HGNC:434]
25. CELSR2 ENSG00000143126 3566 0.852 - 0.852 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
26. DTX4 ENSG00000110042 2639 0.852 - 0.852 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
27. SEMA5B ENSG00000082684 2716 0.849 - 0.849 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
28. LINC00461 ENSG00000245526 4465 0.844 - 0.844 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
29. HS6ST1 ENSG00000136720 4974 0.844 - 0.844 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
30. IRX5 ENSG00000176842 2175 0.844 - 0.844 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
31. PTPRZ1 ENSG00000106278 1326 0.844 - 0.844 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
32. CKB ENSG00000166165 54181 0.844 - 0.844 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
33. HOXB-AS3 ENSG00000233101 1776 0.843 - 0.843 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
34. NRARP ENSG00000198435 1658 0.84 - 0.840 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
35. PAX7 ENSG00000009709 810 0.84 - 0.840 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
36. SOX3 ENSG00000134595 5297 0.839 - 0.839 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
37. NOTCH1 ENSG00000148400 5516 0.832 - 0.832 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
38. CRNDE ENSG00000245694 3754 0.83 - 0.830 colorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]
39. ASRGL1 ENSG00000162174 4293 0.829 - 0.829 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
40. MSX1 ENSG00000163132 2038 0.827 0.827 - msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
41. HES5 ENSG00000197921, ENSG00000273529 9293 0.826 - 0.826 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
42. POU4F2 ENSG00000151615 74 0.826 - 0.826 POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9219]
43. CSPG5 ENSG00000114646 558 0.825 - 0.825 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
44. PDPN ENSG00000162493 5095 0.824 - 0.824 podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
45. GLDC ENSG00000178445 513 0.822 - 0.822 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
46. MYCL ENSG00000116990 1128 0.822 - 0.822 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
47. RGS20 ENSG00000147509 282 0.822 - 0.822 regulator of G protein signaling 20 [Source:HGNC Symbol;Acc:HGNC:14600]
48. WNT3A ENSG00000154342 267 0.821 0.821 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
49. CRABP1 ENSG00000166426 2178 0.821 - 0.821 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
50. FZD10 ENSG00000111432 608 0.817 - 0.817 frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
51. RND2 ENSG00000108830 3761 0.816 - 0.816 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
52. BTG3 ENSG00000154640, ENSG00000281484 4437 0.811 - 0.811 BTG anti-proliferation factor 3 [Source:HGNC Symbol;Acc:HGNC:1132]
53. CCND1 ENSG00000110092 8014 0.81 - 0.810 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
54. GPRC5B ENSG00000167191 684 0.809 - 0.809 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
55. ZBTB16 ENSG00000109906 287 0.807 - 0.807 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
56. LOXL3 ENSG00000115318 92 0.806 0.806 - lysyl oxidase like 3 [Source:HGNC Symbol;Acc:HGNC:13869]
57. TSPAN18 ENSG00000157570 9391 0.806 - 0.806 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
58. CCDC140 ENSG00000163081 233 0.805 - 0.805 coiled-coil domain containing 140 [Source:HGNC Symbol;Acc:HGNC:26514]
59. MIR124-2HG ENSG00000254377 940 0.805 - 0.805 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
60. WNT1 ENSG00000125084 1392 0.801 0.801 - Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
61. ARL4C ENSG00000188042 5437 0.799 - 0.799 ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
62. FAM107A ENSG00000168309 211 0.798 - 0.798 family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
63. NRIP3 ENSG00000175352 238 0.795 - 0.795 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
64. ALPL ENSG00000162551 725 0.794 - 0.794 alkaline phosphatase, liver/bone/kidney [Source:HGNC Symbol;Acc:HGNC:438]
65. ROBO3 ENSG00000154134 1085 0.794 - 0.794 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
66. LINC00682 ENSG00000245870 21 0.794 0.794 - long intergenic non-protein coding RNA 682 [Source:HGNC Symbol;Acc:HGNC:44466]
67. IGFBPL1 ENSG00000137142 3283 0.793 - 0.793 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
68. HOXB9 ENSG00000170689 2051 0.789 - 0.789 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
69. DPYSL5 ENSG00000157851 6855 0.787 - 0.787 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
70. FGFR3 ENSG00000068078 2862 0.781 - 0.781 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
71. STAC ENSG00000144681 259 0.78 0.780 - SH3 and cysteine rich domain [Source:HGNC Symbol;Acc:HGNC:11353]
72. NCKAP5 ENSG00000176771 481 0.776 - 0.776 NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]
73. MSI1 ENSG00000135097 6935 0.776 - 0.776 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
74. IRX3 ENSG00000177508 7140 0.774 - 0.774 iroquois homeobox 3 [Source:HGNC Symbol;Acc:HGNC:14360]
75. PCDH8 ENSG00000136099 203 0.773 - 0.773 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
76. FAM181A ENSG00000140067, ENSG00000273533 1757 0.772 - 0.772 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
77. CA14 ENSG00000118298 1639 0.771 - 0.771 carbonic anhydrase 14 [Source:HGNC Symbol;Acc:HGNC:1372]
78. DLL1 ENSG00000198719, ENSG00000275555 1642 0.771 - 0.771 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
79. TTLL6 ENSG00000170703 59 0.767 0.767 - tubulin tyrosine ligase like 6 [Source:HGNC Symbol;Acc:HGNC:26664]
80. FLJ12825 ENSG00000248265 822 0.767 - 0.767 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
81. SRGAP3 ENSG00000196220 5297 0.762 - 0.762 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
82. SLC6A8 ENSG00000130821 1625 0.759 - 0.759 solute carrier family 6 member 8 [Source:HGNC Symbol;Acc:HGNC:11055]
83. MIAT ENSG00000225783 2977 0.756 - 0.756 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
84. RGS16 ENSG00000143333 2239 0.756 - 0.756 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
85. NUAK2 ENSG00000163545 538 0.755 - 0.755 NUAK family kinase 2 [Source:HGNC Symbol;Acc:HGNC:29558]
86. GAD2 ENSG00000136750 107 0.753 0.753 - glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
87. FAM155B ENSG00000130054 172 0.752 - 0.752 family with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]
88. RGMA ENSG00000182175 3405 0.752 - 0.752 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
89. NES ENSG00000132688 20034 0.751 - 0.751 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
90. ADCY2 ENSG00000078295 722 0.75 0.750 - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
91. CDH4 ENSG00000179242, ENSG00000280641 1069 0.748 - 0.748 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
92. FAM171B ENSG00000144369 57 0.747 0.747 - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
93. CXCR4 ENSG00000121966 4708 0.744 - 0.744 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
94. NEDD9 ENSG00000111859 1509 0.743 - 0.743 neural precursor cell expressed, developmentally down-regulated 9 [Source:HGNC Symbol;Acc:HGNC:7733]
95. PLEKHG1 ENSG00000120278 1008 0.742 - 0.742 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
96. NPAS3 ENSG00000151322 1043 0.742 - 0.742 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
97. SYT11 ENSG00000132718 3832 0.742 - 0.742 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
98. PAX6 ENSG00000007372 3710 0.741 - 0.741 paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]
99. GREB1 ENSG00000196208 4256 0.741 - 0.741 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
100. LINC01158 1332 0.74 - 0.740 long intergenic non-protein coding RNA 1158, transcript variant 4

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA