Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DEPDC1-AS1

Gene Name Gene ID Reads Annotation
DEPDC1-AS1 ENSG00000234264 17 DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]



Genes with expression patterns similar to DEPDC1-AS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. DEPDC1-AS1 ENSG00000234264 17 2 1.000 1.000 DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]
2. LOC646029 53 1.554 0.820 0.734 uncharacterized LOC646029
3. SDR16C6P ENSG00000253542 5 0.919 - 0.919 short chain dehydrogenase/reductase family 16C member 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:35413]
4. TSPAN19 ENSG00000231738 7 0.918 - 0.918 tetraspanin 19 [Source:HGNC Symbol;Acc:HGNC:31886]
5. FAM83E ENSG00000105523 14 0.916 - 0.916 family with sequence similarity 83 member E [Source:HGNC Symbol;Acc:HGNC:25972]
6. TULP2 ENSG00000104804 26 0.909 - 0.909 tubby like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]
7. DEFB124 ENSG00000180383 6 0.903 - 0.903 defensin beta 124 [Source:HGNC Symbol;Acc:HGNC:18104]
8. KCNK9 ENSG00000169427 18 0.896 - 0.896 potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
9. KCNQ5-IT1 ENSG00000233844 16 0.894 - 0.894 KCNQ5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41354]
10. LINC01492 ENSG00000225564 9 0.893 - 0.893 long intergenic non-protein coding RNA 1492 [Source:HGNC Symbol;Acc:HGNC:51149]
11. LOC100996634 6 0.889 - 0.889 transmembrane protein FLJ37396, transcript variant X2
12. LOC101928324 6 0.887 0.887 - uncharacterized LOC101928324, transcript variant 2
13. RLN1 ENSG00000107018 7 0.877 - 0.877 relaxin 1 [Source:HGNC Symbol;Acc:HGNC:10026]
14. DCAF4L2 ENSG00000176566 10 0.869 0.869 - DDB1 and CUL4 associated factor 4 like 2 [Source:HGNC Symbol;Acc:HGNC:26657]
15. FBXO40 ENSG00000163833 9 0.867 0.867 - F-box protein 40 [Source:HGNC Symbol;Acc:HGNC:29816]
16. EPB42 ENSG00000166947 53 0.863 - 0.863 erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:HGNC:3381]
17. LOC101929229 9 0.86 - 0.860 uncharacterized LOC101929229
18. CXCL16 ENSG00000161921 77 0.854 - 0.854 C-X-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:16642]
19. ALMS1-IT1 ENSG00000230002 127 0.854 - 0.854 ALMS1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41305]
20. CD244 ENSG00000122223 8 0.853 - 0.853 CD244 molecule [Source:HGNC Symbol;Acc:HGNC:18171]
21. LANCL3 ENSG00000147036 24 0.85 - 0.850 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
22. FAM228A ENSG00000186453 65 0.847 - 0.847 family with sequence similarity 228 member A [Source:HGNC Symbol;Acc:HGNC:34418]
23. AGTR1 ENSG00000144891 36 0.846 - 0.846 angiotensin II receptor type 1 [Source:HGNC Symbol;Acc:HGNC:336]
24. PSMA8 ENSG00000154611 26 0.84 - 0.840 proteasome subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:22985]
25. AMY2A ENSG00000243480 10 0.835 0.835 - amylase, alpha 2A (pancreatic) [Source:HGNC Symbol;Acc:HGNC:477]
26. LINC00515 ENSG00000260583 47 0.815 - 0.815 long intergenic non-protein coding RNA 515 [Source:NCBI gene;Acc:282566]
27. DNAJC27-AS1 ENSG00000224165 97 0.813 - 0.813 DNAJC27 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42943]
28. FIRRE ENSG00000213468 58 0.81 - 0.810 firre intergenic repeating RNA element [Source:HGNC Symbol;Acc:HGNC:49627]
29. LBP ENSG00000129988 12 0.803 - 0.803 lipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]
30. MAGEB3 ENSG00000198798 21 0.801 - 0.801 MAGE family member B3 [Source:HGNC Symbol;Acc:HGNC:6810]
31. RGMB-AS1 ENSG00000246763 25 0.798 - 0.798 RGMB antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48666]
32. POU6F1 ENSG00000184271 155 0.797 - 0.797 POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]
33. PDIA2 ENSG00000185615 4 0.795 0.795 - protein disulfide isomerase family A member 2 [Source:HGNC Symbol;Acc:HGNC:14180]
34. ATP1B4 ENSG00000101892 10 0.795 0.795 - ATPase Na+/K+ transporting family member beta 4 [Source:HGNC Symbol;Acc:HGNC:808]
35. KCNH3 ENSG00000135519 8 0.795 0.795 - potassium voltage-gated channel subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:6252]
36. LOC101928174 3 0.795 0.795 - uncharacterized LOC101928174
37. LOC101927523 4 0.795 0.795 - uncharacterized LOC101927523
38. OR51B4 ENSG00000183251 5 0.795 0.795 - olfactory receptor family 51 subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:14708]
39. HCG9 ENSG00000204625, ENSG00000206504, ENSG00000227647, ENSG00000234313, ENSG00000234599, ENSG00000236579, ENSG00000237812 3 0.795 0.795 - HLA complex group 9 [Source:HGNC Symbol;Acc:HGNC:21243]
40. LOC400794 5 0.795 0.795 - uncharacterized LOC400794
41. LOC145845 130 0.795 - 0.795 uncharacterized LOC145845
42. LINC01248 ENSG00000224128 8 0.795 0.795 - long intergenic non-protein coding RNA 1248 [Source:HGNC Symbol;Acc:HGNC:49842]
43. PKN2-AS1 ENSG00000237505 30 0.795 - 0.795 PKN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50597]
44. LINC00550 ENSG00000281778 12 0.795 0.795 - long intergenic non-protein coding RNA 550 [Source:HGNC Symbol;Acc:HGNC:43688]
45. GIP ENSG00000159224 8 0.795 0.795 - gastric inhibitory polypeptide [Source:HGNC Symbol;Acc:HGNC:4270]
46. ZNF460 ENSG00000197714 205 0.787 - 0.787 zinc finger protein 460 [Source:HGNC Symbol;Acc:HGNC:21628]
47. LOC401134 22 0.786 - 0.786 uncharacterized LOC401134
48. S100A14 ENSG00000189334 15 0.782 - 0.782 S100 calcium binding protein A14 [Source:HGNC Symbol;Acc:HGNC:18901]
49. SAMD15 ENSG00000100583 16 0.78 0.780 - sterile alpha motif domain containing 15 [Source:HGNC Symbol;Acc:HGNC:18631]
50. NOX1 ENSG00000007952 30 0.777 - 0.777 NADPH oxidase 1 [Source:HGNC Symbol;Acc:HGNC:7889]
51. NANOGNB ENSG00000205857 74 0.775 - 0.775 NANOG neighbor homeobox [Source:HGNC Symbol;Acc:HGNC:24958]
52. MAMDC2 ENSG00000165072, ENSG00000278608 173 0.773 0.773 - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
53. MUC19 ENSG00000205592 12 0.773 0.773 - mucin 19, oligomeric [Source:HGNC Symbol;Acc:HGNC:14362]
54. LINC00473 12 0.772 0.772 - long intergenic non-protein coding RNA 473, transcript variant 2
55. VAX1 ENSG00000148704 13 0.767 0.767 - ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12660]
56. SNHG24 17 0.766 - 0.766 small nucleolar RNA host gene 24
57. AKR1B15 ENSG00000227471 26 0.764 0.764 - aldo-keto reductase family 1 member B15 [Source:HGNC Symbol;Acc:HGNC:37281]
58. LOC100131347 36 0.761 - 0.761 RAD52 motif containing 1 pseudogene
59. SYT16 ENSG00000139973 18 0.761 - 0.761 synaptotagmin 16 [Source:HGNC Symbol;Acc:HGNC:23142]
60. NEK7 ENSG00000151414 969 0.76 - 0.760 NIMA related kinase 7 [Source:HGNC Symbol;Acc:HGNC:13386]
61. PTPN6 ENSG00000111679 23 0.755 - 0.755 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]
62. FAM19A3 ENSG00000184599 151 0.753 - 0.753 family with sequence similarity 19 member A3, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21590]
63. OPHN1 ENSG00000079482 300 0.752 - 0.752 oligophrenin 1 [Source:HGNC Symbol;Acc:HGNC:8148]
64. SAXO2 ENSG00000188659 30 0.751 - 0.751 stabilizer of axonemal microtubules 2 [Source:HGNC Symbol;Acc:HGNC:33727]
65. SH2D4B ENSG00000178217 15 0.75 - 0.750 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
66. DPPA3 ENSG00000187569 33 0.749 0.749 - developmental pluripotency associated 3 [Source:HGNC Symbol;Acc:HGNC:19199]
67. CDKL2 ENSG00000138769 94 0.745 - 0.745 cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
68. TARSL2 ENSG00000185418 716 0.744 - 0.744 threonyl-tRNA synthetase like 2 [Source:HGNC Symbol;Acc:HGNC:24728]
69. LINC00479 ENSG00000236384 55 0.742 0.742 - long intergenic non-protein coding RNA 479 [Source:HGNC Symbol;Acc:HGNC:19727]
70. SPTA1 ENSG00000163554 52 0.741 - 0.741 spectrin alpha, erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11272]
71. NLRP8 ENSG00000179709 25 0.741 0.741 - NLR family pyrin domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22940]
72. C1orf141 ENSG00000203963 18 0.741 - 0.741 chromosome 1 open reading frame 141 [Source:HGNC Symbol;Acc:HGNC:32044]
73. TAF1A ENSG00000143498 798 0.741 - 0.741 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:11532]
74. TPK1 ENSG00000196511, ENSG00000285075 76 0.74 0.740 - thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:HGNC:17358]
75. ARHGEF33 ENSG00000214694 29 0.739 - 0.739 Rho guanine nucleotide exchange factor 33 [Source:HGNC Symbol;Acc:HGNC:37252]
76. FLT3 ENSG00000122025 7 0.736 0.736 - fms related tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:3765]
77. CRSP8P ENSG00000248569 12 0.736 0.736 - mediator complex subunit 27 pseudogene [Source:NCBI gene;Acc:441089]
78. FTH1P18 ENSG00000243048 8 0.736 0.736 - ferritin heavy chain 1 pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:3988]
79. RNF217-AS1 ENSG00000236548 20 0.732 - 0.732 RNF217 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:50866]
80. CCNYL2 ENSG00000182632 8 0.731 0.731 - cyclin Y-like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:23495]
81. SERPINE3 ENSG00000253309 5 0.731 0.731 - serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
82. SLC51A ENSG00000163959 16 0.731 0.731 - solute carrier family 51 alpha subunit [Source:HGNC Symbol;Acc:HGNC:29955]
83. LOC100506258 20 0.731 0.731 - uncharacterized LOC100506258
84. TEC ENSG00000135605 11 0.731 0.731 - tec protein tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11719]
85. PCDHGC3 ENSG00000240184 7 0.731 0.731 - protocadherin gamma subfamily C, 3 [Source:HGNC Symbol;Acc:HGNC:8716]
86. GPR85 ENSG00000164604 325 0.73 - 0.730 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
87. SMIM13 ENSG00000224531 2659 0.728 - 0.728 small integral membrane protein 13 [Source:HGNC Symbol;Acc:HGNC:27356]
88. OSBP2 ENSG00000184792 111 0.727 0.727 - oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]
89. PLP2 ENSG00000102007 138 0.723 0.723 - proteolipid protein 2 [Source:HGNC Symbol;Acc:HGNC:9087]
90. MTUS2 ENSG00000132938 408 0.723 - 0.723 microtubule associated scaffold protein 2 [Source:HGNC Symbol;Acc:HGNC:20595]
91. ATL3 ENSG00000184743 1826 0.721 - 0.721 atlastin GTPase 3 [Source:HGNC Symbol;Acc:HGNC:24526]
92. BCO2 ENSG00000197580 161 0.721 0.721 - beta-carotene oxygenase 2 [Source:HGNC Symbol;Acc:HGNC:18503]
93. LINC01590 23 0.719 0.719 - long intergenic non-protein coding RNA 1590
94. USPL1 ENSG00000132952 697 0.714 - 0.714 ubiquitin specific peptidase like 1 [Source:HGNC Symbol;Acc:HGNC:20294]
95. TRPC3 ENSG00000138741 54 0.712 - 0.712 transient receptor potential cation channel subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:12335]
96. BIN2 ENSG00000110934 62 0.71 - 0.710 bridging integrator 2 [Source:HGNC Symbol;Acc:HGNC:1053]
97. ANKRD44-IT1 ENSG00000236977 54 0.71 - 0.710 ANKRD44 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41477]
98. KLHL32 ENSG00000186231 136 0.709 - 0.709 kelch like family member 32 [Source:HGNC Symbol;Acc:HGNC:21221]
99. RASSF8 ENSG00000123094 1293 0.709 - 0.709 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
100. HCFC2 ENSG00000111727 568 0.707 - 0.707 host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA