Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for FIRRE

Gene Name Gene ID Reads Annotation
FIRRE ENSG00000213468 58 firre intergenic repeating RNA element [Source:HGNC Symbol;Acc:HGNC:49627]



Genes with expression patterns similar to FIRRE

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. FIRRE ENSG00000213468 58 2 1.000 1.000 firre intergenic repeating RNA element [Source:HGNC Symbol;Acc:HGNC:49627]
2. LINC01492 ENSG00000225564 9 0.886 - 0.886 long intergenic non-protein coding RNA 1492 [Source:HGNC Symbol;Acc:HGNC:51149]
3. SDR16C6P ENSG00000253542 5 0.885 - 0.885 short chain dehydrogenase/reductase family 16C member 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:35413]
4. TSPAN19 ENSG00000231738 7 0.885 - 0.885 tetraspanin 19 [Source:HGNC Symbol;Acc:HGNC:31886]
5. KCNK9 ENSG00000169427 18 0.875 - 0.875 potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
6. RLN1 ENSG00000107018 7 0.874 - 0.874 relaxin 1 [Source:HGNC Symbol;Acc:HGNC:10026]
7. TULP2 ENSG00000104804 26 0.873 - 0.873 tubby like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]
8. FAM83E ENSG00000105523 14 0.866 - 0.866 family with sequence similarity 83 member E [Source:HGNC Symbol;Acc:HGNC:25972]
9. DEFB124 ENSG00000180383 6 0.865 - 0.865 defensin beta 124 [Source:HGNC Symbol;Acc:HGNC:18104]
10. EPB42 ENSG00000166947 53 0.861 - 0.861 erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:HGNC:3381]
11. LOC101929229 9 0.857 - 0.857 uncharacterized LOC101929229
12. LOC100996634 6 0.853 - 0.853 transmembrane protein FLJ37396, transcript variant X2
13. KCNQ5-IT1 ENSG00000233844 16 0.844 - 0.844 KCNQ5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41354]
14. AGTR1 ENSG00000144891 36 0.835 - 0.835 angiotensin II receptor type 1 [Source:HGNC Symbol;Acc:HGNC:336]
15. CXCL16 ENSG00000161921 77 0.829 - 0.829 C-X-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:16642]
16. ALMS1-IT1 ENSG00000230002 127 0.819 - 0.819 ALMS1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41305]
17. CD244 ENSG00000122223 8 0.817 - 0.817 CD244 molecule [Source:HGNC Symbol;Acc:HGNC:18171]
18. LANCL3 ENSG00000147036 24 0.816 - 0.816 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
19. FAM228A ENSG00000186453 65 0.81 - 0.810 family with sequence similarity 228 member A [Source:HGNC Symbol;Acc:HGNC:34418]
20. DEPDC1-AS1 ENSG00000234264 17 0.81 - 0.810 DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]
21. LOC101928943 5 0.806 0.806 - uncharacterized LOC101928943, transcript variant 2
22. TEX35 ENSG00000240021 2 0.806 0.806 - testis expressed 35 [Source:HGNC Symbol;Acc:HGNC:25366]
23. CLEC12B ENSG00000256660 2 0.806 0.806 - C-type lectin domain family 12 member B [Source:HGNC Symbol;Acc:HGNC:31966]
24. RMST ENSG00000255794 16 0.806 0.806 - rhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]
25. PRR27 ENSG00000187533, ENSG00000282868 10 0.806 0.806 - proline rich 27 [Source:HGNC Symbol;Acc:HGNC:33193]
26. STPG2-AS1 ENSG00000251620 2 0.806 0.806 - STPG2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41209]
27. SLC22A6 ENSG00000197901 2 0.806 0.806 - solute carrier family 22 member 6 [Source:HGNC Symbol;Acc:HGNC:10970]
28. NMUR2 ENSG00000132911 14 0.806 0.806 - neuromedin U receptor 2 [Source:HGNC Symbol;Acc:HGNC:16454]
29. TGIF2-C20orf24 45 0.806 0.806 - TGIF2-C20orf24 readthrough
30. LOC643441 3 0.806 0.806 - uncharacterized LOC643441
31. DSCR10 ENSG00000233316 5 0.806 0.806 - Down syndrome critical region 10 [Source:HGNC Symbol;Acc:HGNC:16302]
32. TRAT1 ENSG00000163519 6 0.806 0.806 - T cell receptor associated transmembrane adaptor 1 [Source:HGNC Symbol;Acc:HGNC:30698]
33. LOC401134 22 0.802 - 0.802 uncharacterized LOC401134
34. CALB2 ENSG00000172137, ENSG00000282830 37 0.801 0.801 - calbindin 2 [Source:HGNC Symbol;Acc:HGNC:1435]
35. PSMA8 ENSG00000154611 26 0.794 - 0.794 proteasome subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:22985]
36. LBP ENSG00000129988 12 0.786 - 0.786 lipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]
37. LINC00515 ENSG00000260583 47 0.785 - 0.785 long intergenic non-protein coding RNA 515 [Source:NCBI gene;Acc:282566]
38. DNAJC27-AS1 ENSG00000224165 97 0.777 - 0.777 DNAJC27 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42943]
39. PTPN6 ENSG00000111679 23 0.775 - 0.775 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]
40. S100A14 ENSG00000189334 15 0.771 - 0.771 S100 calcium binding protein A14 [Source:HGNC Symbol;Acc:HGNC:18901]
41. RGMB-AS1 ENSG00000246763 25 0.769 - 0.769 RGMB antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48666]
42. LINC00324 ENSG00000178977 91 0.763 - 0.763 long intergenic non-protein coding RNA 324 [Source:HGNC Symbol;Acc:HGNC:26628]
43. PKN2-AS1 ENSG00000237505 30 0.762 - 0.762 PKN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50597]
44. POU6F1 ENSG00000184271 155 0.762 - 0.762 POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]
45. NEK7 ENSG00000151414 969 0.755 - 0.755 NIMA related kinase 7 [Source:HGNC Symbol;Acc:HGNC:13386]
46. PNLIPRP2 ENSG00000266200 8 0.754 0.754 - pancreatic lipase related protein 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:9157]
47. MAGEB3 ENSG00000198798 21 0.753 - 0.753 MAGE family member B3 [Source:HGNC Symbol;Acc:HGNC:6810]
48. LINC00462 ENSG00000233610 6 0.75 0.750 - long intergenic non-protein coding RNA 462 [Source:HGNC Symbol;Acc:HGNC:42811]
49. SYT16 ENSG00000139973 18 0.749 - 0.749 synaptotagmin 16 [Source:HGNC Symbol;Acc:HGNC:23142]
50. ARHGEF33 ENSG00000214694 29 0.749 - 0.749 Rho guanine nucleotide exchange factor 33 [Source:HGNC Symbol;Acc:HGNC:37252]
51. NANOGNB ENSG00000205857 74 0.747 - 0.747 NANOG neighbor homeobox [Source:HGNC Symbol;Acc:HGNC:24958]
52. FAM19A3 ENSG00000184599 151 0.746 - 0.746 family with sequence similarity 19 member A3, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21590]
53. SPTA1 ENSG00000163554 52 0.744 - 0.744 spectrin alpha, erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11272]
54. AVIL ENSG00000135407 46 0.742 - 0.742 advillin [Source:HGNC Symbol;Acc:HGNC:14188]
55. C1orf141 ENSG00000203963 18 0.738 - 0.738 chromosome 1 open reading frame 141 [Source:HGNC Symbol;Acc:HGNC:32044]
56. NOX1 ENSG00000007952 30 0.737 - 0.737 NADPH oxidase 1 [Source:HGNC Symbol;Acc:HGNC:7889]
57. LOC145845 130 0.726 - 0.726 uncharacterized LOC145845
58. SAXO2 ENSG00000188659 30 0.726 - 0.726 stabilizer of axonemal microtubules 2 [Source:HGNC Symbol;Acc:HGNC:33727]
59. LOC646029 53 0.724 - 0.724 uncharacterized LOC646029
60. SNHG24 17 0.721 - 0.721 small nucleolar RNA host gene 24
61. KLHL32 ENSG00000186231 136 0.721 - 0.721 kelch like family member 32 [Source:HGNC Symbol;Acc:HGNC:21221]
62. TAF1A ENSG00000143498 798 0.719 - 0.719 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:11532]
63. SH2D4B ENSG00000178217 15 0.718 - 0.718 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
64. CDKL2 ENSG00000138769 94 0.707 - 0.707 cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
65. RNF217-AS1 ENSG00000236548 20 0.707 - 0.707 RNF217 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:50866]
66. PLAGL1 ENSG00000118495 6344 0.705 - 0.705 PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
67. GPR85 ENSG00000164604 325 0.701 - 0.701 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
68. SMIM13 ENSG00000224531 2659 0.701 - 0.701 small integral membrane protein 13 [Source:HGNC Symbol;Acc:HGNC:27356]
69. CD3G ENSG00000160654 4 0.701 0.701 - CD3g molecule [Source:HGNC Symbol;Acc:HGNC:1675]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA