Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CHD7

Gene Name Gene ID Reads Annotation
CHD7 ENSG00000171316 9450 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]



Genes with expression patterns similar to CHD7

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. CHD7 ENSG00000171316 9450 2 1.000 1.000 chromodomain helicase DNA binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20626]
2. RND2 ENSG00000108830 3761 1.538 0.734 0.804 Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
3. SOX2 ENSG00000181449 19791 1.536 0.729 0.807 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
4. HES6 ENSG00000144485 4284 1.502 0.718 0.784 hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
5. HOXB-AS3 ENSG00000233101 1776 1.498 0.732 0.766 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
6. ZIC2 ENSG00000043355 4457 1.492 0.723 0.769 Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
7. ZIC4 ENSG00000174963 2667 1.487 0.712 0.775 Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
8. ZIC1 ENSG00000152977 18260 1.463 0.704 0.759 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
9. CRABP1 ENSG00000166426 2178 1.453 0.702 0.751 cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
10. RASSF2 ENSG00000101265 1157 1.445 0.711 0.734 Ras association domain family member 2 [Source:HGNC Symbol;Acc:HGNC:9883]
11. NES ENSG00000132688 20034 0.864 - 0.864 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
12. ASRGL1 ENSG00000162174 4293 0.838 - 0.838 asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
13. CKB ENSG00000166165 54181 0.83 - 0.830 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
14. LOC100240734 1898 0.825 - 0.825 uncharacterized LOC100240734
15. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.825 - 0.825 tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
16. MSI1 ENSG00000135097 6935 0.819 - 0.819 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
17. CELSR2 ENSG00000143126 3566 0.818 - 0.818 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
18. RGS16 ENSG00000143333 2239 0.817 - 0.817 regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
19. IGFBPL1 ENSG00000137142 3283 0.816 - 0.816 insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
20. HOXB9 ENSG00000170689 2051 0.812 - 0.812 homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
21. DTX4 ENSG00000110042 2639 0.806 - 0.806 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
22. WHSC1 9250 0.803 - 0.803 Wolf-Hirschhorn syndrome candidate 1, transcript variant X7
23. NR6A1 ENSG00000148200 1390 0.801 - 0.801 nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
24. POU3F2 ENSG00000184486 2683 0.801 - 0.801 POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
25. CECR2 ENSG00000099954 2223 0.799 - 0.799 CECR2, histone acetyl-lysine reader [Source:HGNC Symbol;Acc:HGNC:1840]
26. MKI67 ENSG00000148773 12368 0.798 - 0.798 marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]
27. NRARP ENSG00000198435 1658 0.798 - 0.798 NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
28. RHBDL3 ENSG00000141314 2571 0.798 - 0.798 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
29. NOTCH1 ENSG00000148400 5516 0.796 - 0.796 notch 1 [Source:HGNC Symbol;Acc:HGNC:7881]
30. DPYSL5 ENSG00000157851 6855 0.794 - 0.794 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
31. CXCR4 ENSG00000121966 4708 0.789 - 0.789 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
32. PTPRZ1 ENSG00000106278 1326 0.785 - 0.785 protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
33. MYCL ENSG00000116990 1128 0.785 - 0.785 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
34. SRGAP3 ENSG00000196220 5297 0.784 - 0.784 SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
35. GREB1 ENSG00000196208 4256 0.784 - 0.784 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
36. LINC00461 ENSG00000245526 4465 0.783 - 0.783 long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
37. SOX3 ENSG00000134595 5297 0.781 - 0.781 SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
38. FLJ12825 ENSG00000248265 822 0.78 - 0.780 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
39. APCDD1 ENSG00000154856 2448 0.779 - 0.779 APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
40. INSM1 ENSG00000173404 3113 0.778 - 0.778 INSM transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:6090]
41. KLF13 ENSG00000169926, ENSG00000275746 3783 0.778 - 0.778 Kruppel like factor 13 [Source:NCBI gene;Acc:51621]
42. CCDC85C ENSG00000205476 3808 0.777 - 0.777 coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
43. SLC1A3 ENSG00000079215 1362 0.776 0.776 - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
44. OLMALINC ENSG00000235823 4999 0.775 - 0.775 oligodendrocyte maturation-associated long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28060]
45. TUBA1C ENSG00000167553 11023 0.772 - 0.772 tubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]
46. TSPAN18 ENSG00000157570 9391 0.772 - 0.772 tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
47. MIAT ENSG00000225783 2977 0.771 - 0.771 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
48. FASN ENSG00000169710 19582 0.771 - 0.771 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
49. GLDC ENSG00000178445 513 0.771 - 0.771 glycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]
50. LFNG ENSG00000106003 1260 0.77 - 0.770 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
51. SEMA5B ENSG00000082684 2716 0.769 - 0.769 semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
52. HES5 ENSG00000197921, ENSG00000273529 9293 0.765 - 0.765 hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
53. PAX7 ENSG00000009709 810 0.765 - 0.765 paired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
54. HOXB8 ENSG00000120068 2378 0.763 - 0.763 homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119]
55. LRIG1 ENSG00000144749, ENSG00000282243 1639 0.762 - 0.762 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
56. DLL1 ENSG00000198719, ENSG00000275555 1642 0.761 - 0.761 delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
57. B3GAT1 ENSG00000109956 652 0.76 - 0.760 beta-1,3-glucuronyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:921]
58. CCND1 ENSG00000110092 8014 0.76 - 0.760 cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]
59. HOXB6 ENSG00000108511 1883 0.76 - 0.760 homeobox B6 [Source:HGNC Symbol;Acc:HGNC:5117]
60. CBS ENSG00000160200 15678 0.759 - 0.759 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
61. CSPG5 ENSG00000114646 558 0.756 - 0.756 chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
62. MIR124-2HG ENSG00000254377 940 0.756 - 0.756 MIR124-2 host gene [Source:HGNC Symbol;Acc:HGNC:48723]
63. SLC1A2 ENSG00000110436 1231 0.754 - 0.754 solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
64. JAM2 ENSG00000154721 1771 0.753 - 0.753 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
65. HOXC9 ENSG00000180806 3191 0.753 - 0.753 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
66. ADGRG1 ENSG00000205336 800 0.75 - 0.750 adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
67. WSCD1 ENSG00000179314 1121 0.749 - 0.749 WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
68. MAP6 ENSG00000171533 1692 0.748 - 0.748 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
69. EPB41L4A ENSG00000129595 645 0.747 - 0.747 erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
70. SEPN1 1077 0.746 - 0.746 selenoprotein N, 1, transcript variant 2
71. CENPV ENSG00000166582 18001 0.746 - 0.746 centromere protein V [Source:HGNC Symbol;Acc:HGNC:29920]
72. HOXD3 ENSG00000128652 1324 0.746 - 0.746 homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
73. NAV1 ENSG00000134369 4513 0.746 - 0.746 neuron navigator 1 [Source:HGNC Symbol;Acc:HGNC:15989]
74. MAP1B ENSG00000131711 44568 0.745 - 0.745 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
75. IGDCC3 ENSG00000174498 26431 0.745 - 0.745 immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
76. BCL7A ENSG00000110987, ENSG00000282873 3291 0.744 - 0.744 BCL tumor suppressor 7A [Source:HGNC Symbol;Acc:HGNC:1004]
77. PCDH8 ENSG00000136099 203 0.743 - 0.743 protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
78. ZBTB16 ENSG00000109906 287 0.743 - 0.743 zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
79. NHLH1 ENSG00000171786 4811 0.742 - 0.742 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
80. SYT2 ENSG00000143858 2364 0.739 - 0.739 synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
81. HEYL ENSG00000163909 2647 0.738 - 0.738 hes related family bHLH transcription factor with YRPW motif-like [Source:HGNC Symbol;Acc:HGNC:4882]
82. NOVA1 ENSG00000139910 5990 0.738 - 0.738 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
83. ARL4A ENSG00000122644 3071 0.737 - 0.737 ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
84. CDH4 ENSG00000179242, ENSG00000280641 1069 0.737 - 0.737 cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
85. KPNA2 ENSG00000182481 15072 0.734 - 0.734 karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]
86. ZIC3 ENSG00000156925 420 0.734 - 0.734 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
87. SOX1 ENSG00000182968 1339 0.732 - 0.732 SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
88. LINC00925 LINC00925 517 0.732 - 0.732
89. SYT11 ENSG00000132718 3832 0.729 - 0.729 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
90. DPYSL2 ENSG00000092964 47074 0.728 - 0.728 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
91. TMEM132C ENSG00000181234 1913 0.728 - 0.728 transmembrane protein 132C [Source:HGNC Symbol;Acc:HGNC:25436]
92. RGMA ENSG00000182175 3405 0.727 - 0.727 repulsive guidance molecule BMP co-receptor a [Source:HGNC Symbol;Acc:HGNC:30308]
93. FAM155B ENSG00000130054 172 0.726 - 0.726 family with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]
94. EEF2 ENSG00000167658 47680 0.725 - 0.725 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
95. UCP2 ENSG00000175567 1141 0.723 - 0.723 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
96. HS6ST1 ENSG00000136720 4974 0.723 - 0.723 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]
97. FAM181B ENSG00000182103 461 0.722 - 0.722 family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
98. GPRC5B ENSG00000167191 684 0.722 - 0.722 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
99. PAX3 ENSG00000135903 1126 0.722 - 0.722 paired box 3 [Source:HGNC Symbol;Acc:HGNC:8617]
100. RNF165 ENSG00000141622 1865 0.722 - 0.722 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA