Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo2, section s70.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 8503.74 63745.26 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 5314.84 39840.81
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 2657.42 19920.40 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. mt-atp6 ENSDARG00000063911 2657.42 19920.40 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
5. tmsb4x ENSDARG00000077777 2657.42 19920.40 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. CABZ01074130.1 ENSDARG00000105274 2125.93 15936.28
7. actb1 ENSDARG00000037746, ENSDARG00000113649 2125.93 15936.28 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
8. CABZ01007794.1 CABZ01007794.1 1594.45 11952.23
9. PIK3CA_1 PIK3CA_1 1594.45 11952.23
10. and1 ENSDARG00000088514 1594.45 11952.23 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
11. cyt1l ENSDARG00000036832 1594.45 11952.23 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
12. icn ENSDARG00000009978 1594.45 11952.23 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
13. mt-nd2 ENSDARG00000063899 1594.45 11952.23 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. CLSPN 1062.97 7968.18 claspin
15. actb2 ENSDARG00000037870 1062.97 7968.18 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. actc1b ENSDARG00000099197 1062.97 7968.18 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
17. and2 ENSDARG00000079302 1062.97 7968.18 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
18. and3 ENSDARG00000056873 1062.97 7968.18 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
19. bnip4 ENSDARG00000022832, ENSDARG00000117207 1062.97 7968.18 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
20. btg1 ENSDARG00000027249 1062.97 7968.18 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
21. caprin1a ENSDARG00000009346, ENSDARG00000112212 1062.97 7968.18 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
22. ccm2 ENSDARG00000013705 1062.97 7968.18 CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
23. ckmb ENSDARG00000040565 1062.97 7968.18 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
24. eef2b ENSDARG00000100371, ENSDARG00000109247 1062.97 7968.18 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
25. hmga1a ENSDARG00000028335 1062.97 7968.18 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
26. mt-co2 ENSDARG00000063908 1062.97 7968.18 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
27. sap30l ENSDARG00000030213 1062.97 7968.18 sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
28. serpina10a ENSDARG00000005924 1062.97 7968.18 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
29. srm ENSDARG00000055760 1062.97 7968.18 spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
30. zgc:112425 zgc:112425 1062.97 7968.18
31. zgc:77262 ENSDARG00000044545 1062.97 7968.18 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
32. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 1062.97 7968.18 zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
33. AL954137.2 ENSDARG00000114408 531.48 3984.05
34. BX511245.1 ENSDARG00000096871 531.48 3984.05
35. C6H2orf40 C6H2orf40 531.48 3984.05
36. CABZ01044136.1 CABZ01044136.1 531.48 3984.05
37. CORO1C CORO1C 531.48 3984.05
38. CR376738.1 ENSDARG00000100433 531.48 3984.05
39. CU633999.1 ENSDARG00000098197 531.48 3984.05
40. CU928061.2 CU928061.2 531.48 3984.05
41. ENSDARG00000058255 ENSDARG00000058255 531.48 3984.05
42. ISM2 ISM2 531.48 3984.05
43. NPR2 ENSDARG00000104393 531.48 3984.05 natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
44. PCOLCE_1 PCOLCE_1 531.48 3984.05
45. PDGFC ENSDARG00000077588 531.48 3984.05 platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
46. PELP1 ENSDARG00000079313 531.48 3984.05 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
47. PHLDB1 PHLDB1 531.48 3984.05
48. SRGAP3 ENSDARG00000060309 531.48 3984.05 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
49. TMEM87A TMEM87A 531.48 3984.05
50. TNRC6C_1 TNRC6C_1 531.48 3984.05
51. UBC ENSDARG00000102632 531.48 3984.05 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
52. acp5a ENSDARG00000019763, ENSDARG00000111996 531.48 3984.05 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
53. ago3b ENSDARG00000063079 531.48 3984.05 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
54. aida ENSDARG00000014532 531.48 3984.05 axin interactor, dorsalization associated [Source:ZFIN;Acc:ZDB-GENE-071126-2]
55. antxr1c ENSDARG00000063612 531.48 3984.05 ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
56. ap3d1 ENSDARG00000071424, ENSDARG00000114974 531.48 3984.05 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
57. apoa2 ENSDARG00000015866 531.48 3984.05 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
58. apobb apobb 531.48 3984.05
59. arid2 ENSDARG00000007413 531.48 3984.05 AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
60. arl4cb ENSDARG00000032708, ENSDARG00000110274 531.48 3984.05 ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
61. arpc1a ENSDARG00000008383 531.48 3984.05 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
62. atp2a1 ENSDARG00000020574 531.48 3984.05 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
63. atp5f1 531.48 3984.05 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
64. atp6v1h ENSDARG00000006370 531.48 3984.05 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
65. azi1_1 azi1_1 531.48 3984.05
66. azi2 ENSDARG00000102419 531.48 3984.05 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
67. basp1 ENSDARG00000053358, ENSDARG00000110677 531.48 3984.05 brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
68. btbd10b ENSDARG00000020252 531.48 3984.05 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
69. capn9 ENSDARG00000012341 531.48 3984.05 calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
70. ccng1 ENSDARG00000076667, ENSDARG00000110260 531.48 3984.05 cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
71. cd63 ENSDARG00000025147, ENSDARG00000115979 531.48 3984.05 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
72. cd9b ENSDARG00000016691 531.48 3984.05 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
73. cdh6 ENSDARG00000014522 531.48 3984.05 cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
74. cfl1l ENSDARG00000012972 531.48 3984.05 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
75. col1a1b ENSDARG00000035809 531.48 3984.05 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
76. col2a1a ENSDARG00000069093, ENSDARG00000111202 531.48 3984.05 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
77. col5a1 ENSDARG00000012593 531.48 3984.05 procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]
78. col6a2 ENSDARG00000061436 531.48 3984.05 collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
79. col9a1 col9a1 531.48 3984.05
80. cox8a ENSDARG00000095273 531.48 3984.05 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
81. dgcr14 531.48 3984.05 DiGeorge syndrome critical region gene 14
82. dnajc8 ENSDARG00000059373 531.48 3984.05 DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
83. eef1a1l1 ENSDARG00000020850 531.48 3984.05 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
84. eif4a3 ENSDARG00000102978 531.48 3984.05 eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
85. elf2b ENSDARG00000079626, ENSDARG00000117064 531.48 3984.05 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
86. elof1 ENSDARG00000099453 531.48 3984.05 ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
87. erc1b ENSDARG00000031930 531.48 3984.05 ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
88. erh ENSDARG00000032866 531.48 3984.05 enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
89. fam26f 531.48 3984.05 family with sequence similarity 26, member F
90. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 531.48 3984.05 F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
91. flncb ENSDARG00000018820 531.48 3984.05 filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
92. fnta ENSDARG00000099143 531.48 3984.05 farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
93. foxd2 ENSDARG00000058133 531.48 3984.05 forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
94. foxp1a ENSDARG00000004843 531.48 3984.05 forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
95. ftr82 ENSDARG00000055647 531.48 3984.05 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
96. gamt ENSDARG00000070844, ENSDARG00000109945 531.48 3984.05 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
97. gpia ENSDARG00000012987 531.48 3984.05 glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
98. hapln1a ENSDARG00000089769 531.48 3984.05 hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
99. hmgn2 ENSDARG00000099572 531.48 3984.05 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
100. hnrnpa0a ENSDARG00000089302 531.48 3984.05 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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