Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PDGFC

Gene Name Gene ID Reads Annotation
PDGFC ENSDARG00000077588 1064 platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]










Genes with expression patterns similar to PDGFC

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PDGFC ENSDARG00000077588 1064 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
2. TMEM87A TMEM87A 2407 2.447 - 0.725 - - - - 0.724 - 0.998
3. CR376738.1 ENSDARG00000100433 660 1.933 0.934 - - - - - - - 0.999
4. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.895 - - - - - - 0.907 - 0.988 R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
5. azi1_1 azi1_1 1375 1.793 - - - - - - 0.794 - 0.999
6. CABZ01007794.1 CABZ01007794.1 14290 1.711 - - - - - - 0.738 - 0.973
7. TPMT_1 TPMT_1 214 1.694 0.823 - - - - - 0.871 - -
8. BICD2_1 BICD2_1 18 1.681 0.843 - - - - - 0.838 - -
9. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.673 - - - 0.709 - - - - 0.964 ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
10. MAGI3 MAGI3 114 1.665 0.882 0.783 - - - - - - -
11. CAPN15 ENSDARG00000060600 248 1.657 0.850 - - 0.807 - - - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
12. sqlea ENSDARG00000079946 145 1.645 0.874 - - - - - 0.771 - - squalene epoxidase a [Source:ZFIN;Acc:ZDB-GENE-071004-98]
13. pdxka ENSDARG00000088959 217 1.645 0.876 0.769 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
14. si:dkeyp-13a3.9 si:dkeyp-13a3.9 362 1.641 0.809 0.832 - - - - - - -
15. zgc:114046 ENSDARG00000091728 68 1.64 0.893 0.747 - - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
16. commd7 ENSDARG00000036784, ENSDARG00000111683 997 1.636 - 0.819 - - - - 0.817 - - COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
17. trove2 ENSDARG00000089225 430 1.627 - 0.783 - 0.844 - - - - - TROVE domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-051113-300]
18. U3 U3 287 1.625 - - - 0.788 - - 0.837 - -
19. tmem168a ENSDARG00000068705 498 1.623 - - - 0.808 - - 0.815 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
20. ano5b ENSDARG00000036147 89 1.62 0.880 - - - - - 0.740 - - anoctamin 5b [Source:ZFIN;Acc:ZDB-GENE-061215-108]
21. CENPT CENPT 330 1.619 0.802 - - - - - 0.817 - -
22. zgc:153924 507 1.619 - - - 0.804 - - 0.815 - - zgc:153924
23. ndufs8b ENSDARG00000057055 10 1.617 0.848 0.769 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
24. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.615 - 0.769 - - - - 0.846 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
25. CU367845.1_1 CU367845.1_1 43 1.612 0.843 0.769 - - - - - - -
26. ccdc85cb ENSDARG00000079555 63 1.612 - 0.828 - - - - 0.784 - - coiled-coil domain containing 85C, b [Source:ZFIN;Acc:ZDB-GENE-040718-373]
27. mir203a 1519 1.611 - 0.826 - - - - 0.785 - - microRNA 203a
28. tmem68 ENSDARG00000086737 209 1.604 0.787 - - - - - 0.817 - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
29. b3gnt7 ENSDARG00000038489 29 1.601 0.757 - - - 0.844 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
30. zgc:136254 ENSDARG00000068465 27 1.599 - 0.761 - - - - 0.838 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
31. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.598 0.790 0.808 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
32. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.597 - - - 0.749 - - 0.848 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
33. lpar6b ENSDARG00000069441 65 1.595 - - - - 0.768 - 0.827 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
34. MPPED1 ENSDARG00000088181 117 1.595 - 0.757 - - - - 0.838 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
35. pvrl1b 1645 1.593 - - - 0.735 - - 0.858 - - poliovirus receptor-related 1b
36. fntb ENSDARG00000027916 736 1.589 0.739 - - - - - 0.850 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
37. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1.586 0.848 0.738 - - - - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
38. NPBWR2 NPBWR2 132 1.581 - 0.774 - - - - 0.807 - -
39. ntn2 ENSDARG00000076748 368 1.576 - - - 0.851 - - - 0.725 - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
40. iqsec2 iqsec2 304 1.569 - 0.747 - 0.822 - - - - -
41. stk16 ENSDARG00000037777 255 1.568 - 0.727 - - - - 0.841 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
42. tfcp2 ENSDARG00000060306 1024 1.568 - - - - - - 0.847 0.721 - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
43. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.566 - - - 0.843 - - 0.723 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
44. si:ch211-113p18.3 ENSDARG00000087835 377 1.563 - - - 0.799 - - 0.764 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
45. ZBTB11 ENSDARG00000017886 817 1.563 - 0.778 - - - - 0.785 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
46. zgc:174935 ENSDARG00000079255 532 1.563 - 0.803 - - - - 0.760 - - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
47. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 1.562 0.843 - - - 0.719 - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
48. acsl4l acsl4l 540 1.553 0.737 - - 0.816 - - - - -
49. nudt1 ENSDARG00000030573 268 1.545 - - - 0.824 - - 0.721 - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
50. gltpd1 gltpd1 377 1.54 - - - 0.797 - - 0.743 - -
51. egfl6 ENSDARG00000045958 335 1.535 - 0.782 - - - - 0.753 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
52. dnaja3b ENSDARG00000102295 291 1.53 0.745 0.785 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3B [Source:ZFIN;Acc:ZDB-GENE-040115-3]
53. chic2 ENSDARG00000022690 184 1.528 - - - 0.793 - - 0.735 - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
54. SHF SHF 92 1.528 0.790 0.738 - - - - - - -
55. MTFP1 210 1.527 - 0.738 - - - - 0.789 - - mitochondrial fission process 1
56. CFP ENSDARG00000094451 852 1.52 - - - 0.704 - - 0.816 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
57. lrrc32 ENSDARG00000040621 348 1.519 0.735 - - - - - 0.784 - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
58. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.516 - 0.738 - - - - 0.778 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
59. abcb10 ENSDARG00000061591 253 1.51 0.747 - - - - - 0.763 - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
60. spint1b ENSDARG00000012467 97 1.506 - 0.763 - - - - 0.743 - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
61. LRRC8E LRRC8E 495 1.497 0.713 - - - - - 0.784 - -
62. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.495 - - - 0.720 - - 0.775 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
63. pdp1 ENSDARG00000076308 455 1.493 - 0.726 - 0.767 - - - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-70]
64. CABZ01081749.1 CABZ01081749.1 637 1.49 - - - 0.763 - - 0.727 - -
65. tbx16 ENSDARG00000007329 255 1.486 - 0.704 - 0.782 - - - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
66. dlg1 ENSDARG00000009677 706 1.476 - - - 0.772 - - 0.704 - - discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
67. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 1.475 0.774 0.701 - - - - - - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
68. CR388013.3 CR388013.3 45 1.475 - 0.769 0.706 - - - - - -
69. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.474 - - - - - 0.727 0.747 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
70. TMC6 TMC6 773 1.466 - - - - 0.715 - 0.751 - -
71. rfx1b ENSDARG00000075904 1175 1.46 - - - 0.730 - - 0.730 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
72. si:dkey-95p16.2 ENSDARG00000093484 3413 1.459 - - - 0.708 - - 0.751 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
73. inhbb ENSDARG00000040777 2141 1.445 - - - 0.735 - - 0.710 - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
74. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.428 - 0.723 - - - - 0.705 - - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
75. trappc6b ENSDARG00000016463 1343 0.999 - - - - - - - - 0.999 trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
76. pld2 ENSDARG00000034262 952 0.999 - - - - - - - - 0.999 phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
77. ago3b ENSDARG00000063079 1441 0.999 - - - - - - - - 0.999 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
78. CLSPN 2054 0.999 - - - - - - - - 0.999 claspin
79. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.999 - - - - - - - - 0.999 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
80. ppap2c ppap2c 1361 0.999 - - - - - - - - 0.999
81. zgc:101130 ENSDARG00000101926 924 0.999 - - - - - - - - 0.999 zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
82. fam26f 595 0.999 - - - - - - - - 0.999 family with sequence similarity 26, member F
83. NPR2 ENSDARG00000104393 1875 0.999 - - - - - - - - 0.999 natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
84. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.999 - - - - - - - - 0.999 zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
85. serpina10a ENSDARG00000005924 1177 0.999 - - - - - - - - 0.999 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
86. slc25a36b ENSDARG00000015915 1750 0.999 - - - - - - - - 0.999 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
87. azi2 ENSDARG00000102419 1380 0.999 - - - - - - - - 0.999 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
88. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.999 - - - - - - - - 0.999 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
89. foxd2 ENSDARG00000058133 1150 0.999 - - - - - - - - 0.999 forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
90. dnajc8 ENSDARG00000059373 1858 0.999 - - - - - - - - 0.999 DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
91. CABZ01044136.1 CABZ01044136.1 2596 0.998 - - - - - - - - 0.998
92. fnta ENSDARG00000099143 1845 0.998 - - - - - - - - 0.998 farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
93. foxp1a ENSDARG00000004843 3961 0.998 - - - - - - - - 0.998 forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
94. zgc:77262 ENSDARG00000044545 5563 0.998 - - - - - - - - 0.998 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
95. ENSDARG00000058255 ENSDARG00000058255 1715 0.998 - - - - - - - - 0.998
96. purbb ENSDARG00000103546 4983 0.998 - - - - - - - - 0.998 purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
97. ftr82 ENSDARG00000055647 3302 0.998 - - - - - - - - 0.998 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
98. dgcr14 1608 0.998 - - - - - - - - 0.998 DiGeorge syndrome critical region gene 14
99. PIK3CA_1 PIK3CA_1 4065 0.998 - - - - - - - - 0.998
100. ISM2 ISM2 1710 0.997 - - - - - - - - 0.997

There are 1442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA