Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo2, section s67.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 9534.04 71464.84 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. col1a1a ENSDARG00000012405, ENSDARG00000116113 8507.68 63771.50 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
3. AC024175.4 AC024175.4 6195.27 46438.23
4. tmsb4x ENSDARG00000077777 4266.21 31978.47 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. and1 ENSDARG00000088514 2126.92 15942.87 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
6. CABZ01074130.1 ENSDARG00000105274 1669.38 12513.27
7. actb2 ENSDARG00000037870 1422.07 10659.49 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
8. actb1 ENSDARG00000037746, ENSDARG00000113649 1310.78 9825.29 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
9. and2 ENSDARG00000079302 1211.85 9083.73 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
10. and3 ENSDARG00000056873 1162.39 8712.99 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
11. im:7150988 ENSDARG00000109310 1162.39 8712.99 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
12. zgc:92061 zgc:92061 816.14 6117.59
13. krt8 ENSDARG00000058358, ENSDARG00000109279 680.12 5098.01 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
14. eef1a1l1 ENSDARG00000020850 655.39 4912.64 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. ptmab ENSDARG00000101766 630.66 4727.27 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
16. wu:fb17f05 wu:fb17f05 605.92 4541.83
17. si:dkey-151g10.6 si:dkey-151g10.6 593.56 4449.18
18. ppiaa ENSDARG00000009212 581.19 4356.46 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
19. cfl1l ENSDARG00000012972 544.10 4078.44 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
20. icn ENSDARG00000009978 531.73 3985.72 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
21. apoc1l apoc1l 494.63 3707.63
22. icn2 ENSDARG00000055514 457.54 3429.61 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
23. id1 ENSDARG00000040764 445.17 3336.89 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
24. mt-co2 ENSDARG00000063908 445.17 3336.89 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
25. mt-co3 ENSDARG00000063912 445.17 3336.89 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
26. pfn1 ENSDARG00000088091 445.17 3336.89 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
27. hspa8 ENSDARG00000068992, ENSDARG00000114726 432.80 3244.16 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
28. mt-atp6 ENSDARG00000063911 408.07 3058.79 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
29. mt-nd4 ENSDARG00000063917 395.71 2966.15 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
30. cyt1l ENSDARG00000036832 383.34 2873.42 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
31. rps23 ENSDARG00000021838 383.34 2873.42 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
32. hmga1a ENSDARG00000028335 370.97 2780.70 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. rpl26 ENSDARG00000102317 358.61 2688.05 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
34. rpl18a ENSDARG00000025073 346.24 2595.33 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
35. rps27a ENSDARG00000032725, ENSDARG00000114059 346.24 2595.33 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
36. sparc ENSDARG00000019353 346.24 2595.33 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
37. rpl10a ENSDARG00000042905, ENSDARG00000115649 333.88 2502.68 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
38. zgc:92533 zgc:92533 333.88 2502.68
39. rps14 ENSDARG00000036629 296.78 2224.59 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
40. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 296.78 2224.59 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
41. eef2b ENSDARG00000100371, ENSDARG00000109247 284.41 2131.87 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
42. rpl23 ENSDARG00000053457 284.41 2131.87 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. RPL29 ENSDARG00000077717 259.68 1946.50 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
44. rpl8 ENSDARG00000014867 259.68 1946.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. mt-nd2 ENSDARG00000063899 247.32 1853.85 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
46. rplp1 ENSDARG00000021864 234.95 1761.13 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
47. rps5 ENSDARG00000043453 234.95 1761.13 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
48. vcanb ENSDARG00000009401 234.95 1761.13 versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
49. eif5a ENSDARG00000017235 222.58 1668.41 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
50. rpl19 ENSDARG00000013307 222.58 1668.41 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
51. gnb2l1 210.22 1575.76 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
52. rpl27 ENSDARG00000015128 210.22 1575.76 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
53. rps20 ENSDARG00000036044 210.22 1575.76 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
54. rps26l ENSDARG00000030408 210.22 1575.76 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
55. CU914813.1 CU914813.1 197.85 1483.04
56. apoeb ENSDARG00000040295 197.85 1483.04 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
57. btf3 ENSDARG00000035400, ENSDARG00000116462 197.85 1483.04 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
58. frem2a ENSDARG00000076856 197.85 1483.04 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
59. krt18 ENSDARG00000018404, ENSDARG00000109528 197.85 1483.04 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
60. pabpc1a ENSDARG00000017219 197.85 1483.04 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
61. rab2a ENSDARG00000020261 197.85 1483.04 RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
62. rpl36a ENSDARG00000058105, ENSDARG00000112656 197.85 1483.04 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
63. rpl9 ENSDARG00000037350, ENSDARG00000112384 197.85 1483.04 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
64. rps27.1 ENSDARG00000023298 197.85 1483.04 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
65. rps9 ENSDARG00000011405, ENSDARG00000113248 197.85 1483.04 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
66. s100a10b ENSDARG00000025254 197.85 1483.04 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
67. bcam ENSDARG00000090190 185.49 1390.39 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
68. rpl36 ENSDARG00000100588 185.49 1390.39 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
69. rplp2 ENSDARG00000101406 185.49 1390.39 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
70. rps10 ENSDARG00000034897 185.49 1390.39 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
71. rpsa ENSDARG00000019181 185.49 1390.39 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
72. si:ch1073-429i10.3 185.49 1390.39 si:ch1073-429i10.3, transcript variant X2
73. zgc:112425 zgc:112425 185.49 1390.39
74. FP067396.1 FP067396.1 173.12 1297.67
75. NID1 NID1 173.12 1297.67
76. arpc2 ENSDARG00000075989 173.12 1297.67 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
77. col1a1b ENSDARG00000035809 173.12 1297.67 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
78. fkbp1aa ENSDARG00000022684 173.12 1297.67 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
79. hsp90ab1 ENSDARG00000029150 173.12 1297.67 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
80. marcksl1a ENSDARG00000039034 173.12 1297.67 MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
81. myl12.1 ENSDARG00000099766 173.12 1297.67 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
82. rplp2l ENSDARG00000011201 173.12 1297.67 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
83. rps15 ENSDARG00000070849, ENSDARG00000110979 173.12 1297.67 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
84. rps3 ENSDARG00000103007 173.12 1297.67 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
85. serp1 ENSDARG00000099439 173.12 1297.67 stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
86. spna2 173.12 1297.67 spectrin alpha 2, transcript variant X12
87. acy3.2 ENSDARG00000005525 160.76 1205.02 aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
88. anxa1a ENSDARG00000026726 160.76 1205.02 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
89. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 160.76 1205.02 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
90. rps12 ENSDARG00000036875, ENSDARG00000115157 160.76 1205.02 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
91. rps19 ENSDARG00000030602 160.76 1205.02 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
92. si:ch211-157c3.4 ENSDARG00000087093 160.76 1205.02 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
93. AC024175.17 AC024175.17 148.39 1112.30
94. ahnak ENSDARG00000061764 148.39 1112.30 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
95. calm2a ENSDARG00000031427, ENSDARG00000111871 148.39 1112.30 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
96. cfl1 ENSDARG00000021124 148.39 1112.30 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
97. h3f3a 148.39 1112.30 H3 histone, family 3A, transcript variant X1
98. mt-nd1 ENSDARG00000063895 148.39 1112.30 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
99. pleca ENSDARG00000062590 148.39 1112.30 plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
100. rcn1 ENSDARG00000070006 148.39 1112.30 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA