Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rps3

Gene Name Gene ID Reads Annotation
rps3 ENSDARG00000103007 77047 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]










Genes with expression patterns similar to rps3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rps3 ENSDARG00000103007 77047 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
2. eif3s6ip ENSDARG00000101082 18515 2.234 0.720 - - - 0.805 - 0.709 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
3. rps4x ENSDARG00000014690 88322 1.532 0.758 - - 0.774 - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
4. gnb2l1 61553 1.523 0.717 - - - - - 0.806 - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
5. rpl22l1 ENSDARG00000010244 36262 1.504 0.775 0.729 - - - - - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
6. ak1 ENSDARG00000001950 26964 1.5 0.715 - - - - - 0.785 - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
7. cct5 ENSDARG00000045399 11572 1.458 0.758 - - - - - 0.700 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
8. rpl7 ENSDARG00000007320 81359 1.424 0.712 - - 0.712 - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
9. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.421 0.718 0.703 - - - - - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
10. aldoaa ENSDARG00000011665 56184 0.963 - - - - - - 0.963 - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
11. faua ENSDARG00000099022 82901 0.932 - 0.932 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
12. rplp2l ENSDARG00000011201 77026 0.912 - - - - - - 0.912 - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
13. rpsa ENSDARG00000019181 93440 0.875 0.875 - - - - - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
14. rps23 ENSDARG00000021838 145026 0.861 0.861 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
15. rplp1 ENSDARG00000021864 127841 0.856 0.856 - - - - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
16. rps6 ENSDARG00000019778 87546 0.855 - - - - 0.855 - - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
17. rps2 ENSDARG00000077291 105394 0.841 - - - - - - 0.841 - - ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
18. ube2e3 ENSDARG00000012244 8909 0.834 - - - - - - - - 0.834 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
19. atp5l ENSDARG00000011841 32098 0.83 - - - - 0.830 - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [Source:ZFIN;Acc:ZDB-GENE-030131-5177]
20. ppiaa ENSDARG00000009212 290634 0.826 0.826 - - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
21. rps14 ENSDARG00000036629 125331 0.825 0.825 - - - - - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
22. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.822 0.822 - - - - - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
23. rps15a ENSDARG00000010160 94499 0.82 - - - - - - 0.820 - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
24. pgam5 ENSDARG00000035608 4044 0.809 0.809 - - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
25. rplp0 ENSDARG00000051783 88740 0.809 0.809 - - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
26. rplp2 ENSDARG00000101406 77670 0.809 - - - - - - 0.809 - - ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
27. rpl15 ENSDARG00000009285 81944 0.805 - - - - - - 0.805 - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
28. cacna2d1a ENSDARG00000014804 1924 0.804 0.804 - - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
29. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.804 0.804 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
30. hnrnpab hnrnpab 72354 0.8 - - - - - - 0.800 - -
31. vbp1 ENSDARG00000030241 10619 0.799 0.799 - - - - - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
32. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 0.797 - - - - - - 0.797 - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
33. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 0.796 0.796 - - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
34. zgc:193541 ENSDARG00000092873 21276 0.792 - - - - 0.792 - - - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
35. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.791 0.791 - - - - - - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
36. calm1b ENSDARG00000034187 13158 0.788 0.788 - - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
37. rps27.2 ENSDARG00000055475 51081 0.786 - - - - - - 0.786 - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
38. rpl36 ENSDARG00000100588 115695 0.784 0.784 - - - - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
39. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 0.783 - - - - - - 0.783 - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
40. rps5 ENSDARG00000043453 91085 0.782 0.782 - - - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
41. rps19 ENSDARG00000030602 77975 0.782 0.782 - - - - - - - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
42. rpl23a ENSDARG00000006316 59831 0.777 0.777 - - - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
43. rps29 ENSDARG00000041232 71334 0.776 0.776 - - - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
44. eif5a ENSDARG00000017235 108602 0.776 - - - 0.776 - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
45. rpl18 ENSDARG00000029533 89500 0.774 0.774 - - - - - - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
46. rpl26 ENSDARG00000102317 154515 0.773 0.773 - - - - - - - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
47. pkmb ENSDARG00000099860 25094 0.772 - - - - - - 0.772 - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
48. eef1b2 ENSDARG00000044521 26570 0.772 0.772 - - - - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
49. rps27.1 ENSDARG00000023298 86382 0.771 0.771 - - - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
50. ank1 ank1 5209 0.771 0.771 - - - - - - - -
51. nhp2l1b nhp2l1b 3898 0.77 0.770 - - - - - - - -
52. hdgfrp2 7462 0.769 0.769 - - - - - - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
53. rpl27 ENSDARG00000015128 108038 0.768 0.768 - - - - - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
54. cct3 ENSDARG00000016173 15869 0.767 0.767 - - - - - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
55. rps25 ENSDARG00000041811 52182 0.766 0.766 - - - - - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
56. C1QBP ENSDARG00000039887 11186 0.765 0.765 - - - - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
57. NAT16 ENSDARG00000086222 4682 0.765 0.765 - - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
58. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 0.765 0.765 - - - - - - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
59. myod1 ENSDARG00000030110 6019 0.764 0.764 - - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
60. gstm gstm 4064 0.764 0.764 - - - - - - - -
61. rps21 ENSDARG00000025850 25954 0.763 - - - - - - 0.763 - - ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-040426-1102]
62. rpl6 ENSDARG00000058451 82152 0.762 0.762 - - - - - - - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
63. mybpc2b ENSDARG00000021265 9618 0.758 0.758 - - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
64. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 0.757 0.757 - - - - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
65. cnbpa ENSDARG00000045776 8648 0.754 0.754 - - - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
66. chrna1 ENSDARG00000009021 2931 0.754 0.754 - - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
67. gapdh ENSDARG00000043457 68684 0.753 0.753 - - - - - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
68. rpl38 ENSDARG00000006413 59590 0.753 0.753 - - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
69. eif3i ENSDARG00000017445 21149 0.753 0.753 - - - - - - - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
70. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.752 0.752 - - - - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
71. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.751 0.751 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
72. GPRC5B GPRC5B 897 0.751 0.751 - - - - - - - -
73. xirp2b ENSDARG00000091090 759 0.751 0.751 - - - - - - - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
74. IDH2 ENSDARG00000003795 18659 0.75 - - - - - - - - 0.750 isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
75. jam3b ENSDARG00000061794 5655 0.748 0.748 - - - - - - - - junctional adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-030131-441]
76. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.748 0.748 - - - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
77. fbxw5 ENSDARG00000099139 2802 0.748 0.748 - - - - - - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
78. rpl28 ENSDARG00000005791 61993 0.748 0.748 - - - - - - - - ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
79. ndufs7 ENSDARG00000074552, ENSDARG00000111455 10753 0.747 - - - - - - 0.747 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:ZFIN;Acc:ZDB-GENE-041111-261]
80. snrpf ENSDARG00000105037 10241 0.744 0.744 - - - - - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
81. rps18 ENSDARG00000100392 64615 0.744 - - - 0.744 - - - - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
82. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 0.742 0.742 - - - - - - - - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
83. casq2 ENSDARG00000008982 21802 0.741 0.741 - - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
84. mrpl22 ENSDARG00000109961 1374 0.739 0.739 - - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
85. BX511252.1 BX511252.1 59309 0.738 - - - - 0.738 - - - -
86. SYNPO2L SYNPO2L 6697 0.738 - - - - - - 0.738 - -
87. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 0.738 0.738 - - - - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
88. tnni2a.4 ENSDARG00000029069 122344 0.737 0.737 - - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
89. rbl2 ENSDARG00000045636 658 0.736 0.736 - - - - - - - - retinoblastoma-like 2 (p130) [Source:ZFIN;Acc:ZDB-GENE-061109-2]
90. rpl5a ENSDARG00000020197 35209 0.736 0.736 - - - - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
91. REXO4 ENSDARG00000088619 655 0.736 0.736 - - - - - - - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
92. grpel2 ENSDARG00000069421 5673 0.735 0.735 - - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
93. zgc:162967 zgc:162967 2132 0.733 0.733 - - - - - - - -
94. ptp4a3 ENSDARG00000039997 1964 0.732 0.732 - - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
95. myhz2 ENSDARG00000012944 69921 0.732 0.732 - - - - - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
96. txlnbb ENSDARG00000076241 6396 0.732 0.732 - - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
97. rps26l ENSDARG00000030408 146322 0.73 0.730 - - - - - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
98. gamt ENSDARG00000070844, ENSDARG00000109945 49216 0.73 - - - - - - - - 0.730 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
99. RPL29 ENSDARG00000077717 88791 0.73 0.730 - - - - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
100. rpl23 ENSDARG00000053457 174183 0.728 0.728 - - - - - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]

There are 85 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA