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Experiment Zebrafish_40hpf_whole_embryo1, section s73.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17760.17 133130.51
2. krt4 ENSDARG00000017624, ENSDARG00000115790 11684.88 87590.04 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 3979.63 29831.37 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. col1a1a ENSDARG00000012405, ENSDARG00000116113 3238.74 24277.64 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
5. and1 ENSDARG00000088514 1947.48 14598.34 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
6. actb1 ENSDARG00000037746, ENSDARG00000113649 1926.31 14439.65 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
7. CABZ01074130.1 ENSDARG00000105274 1693.46 12694.20
8. im:7150988 ENSDARG00000109310 1608.79 12059.51 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
9. actb2 ENSDARG00000037870 1248.93 9362.00 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. and2 ENSDARG00000079302 1248.93 9362.00 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
11. zgc:92061 zgc:92061 1079.58 8092.55
12. wu:fb17f05 wu:fb17f05 952.57 7140.48
13. cfl1l ENSDARG00000012972 931.40 6981.79 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
14. and3 ENSDARG00000056873 740.89 5553.72 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
15. icn ENSDARG00000009978 740.89 5553.72 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
16. eef1a1l1 ENSDARG00000020850 656.22 4919.04 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. zgc:92533 zgc:92533 656.22 4919.04
18. rpl10a ENSDARG00000042905, ENSDARG00000115649 635.05 4760.34 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
19. mt-co2 ENSDARG00000063908 613.88 4601.65 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
20. mt-co3 ENSDARG00000063912 613.88 4601.65 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
21. si:dkey-151g10.6 si:dkey-151g10.6 592.71 4442.96
22. icn2 ENSDARG00000055514 529.21 3966.97 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
23. pfn1 ENSDARG00000088091 444.53 3332.20 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
24. ppiaa ENSDARG00000009212 444.53 3332.20 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
25. rpl23 ENSDARG00000053457 444.53 3332.20 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
26. rpl18 ENSDARG00000029533 423.37 3173.59 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
27. rpl26 ENSDARG00000102317 423.37 3173.59 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
28. sparc ENSDARG00000019353 423.37 3173.59 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
29. ptmab ENSDARG00000101766 402.20 3014.90 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
30. rpl22 ENSDARG00000070437 402.20 3014.90 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
31. cyt1l ENSDARG00000036832 381.03 2856.21 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
32. hmga1a ENSDARG00000028335 381.03 2856.21 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. hspa8 ENSDARG00000068992, ENSDARG00000114726 381.03 2856.21 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
34. mt-cyb ENSDARG00000063924 381.03 2856.21 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. rps2 ENSDARG00000077291 359.86 2697.52 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
36. bcam ENSDARG00000090190 338.69 2538.83 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
37. mt-atp6 ENSDARG00000063911 338.69 2538.83 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
38. rpl11 ENSDARG00000043509 338.69 2538.83 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
39. rpl27 ENSDARG00000015128 338.69 2538.83 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
40. hdlbp hdlbp 317.52 2380.13
41. hmgn2 ENSDARG00000099572 317.52 2380.13 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
42. krt8 ENSDARG00000058358, ENSDARG00000109279 317.52 2380.13 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
43. mt-nd2 ENSDARG00000063899 317.52 2380.13 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
44. rpl28 ENSDARG00000005791 317.52 2380.13 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
45. rpl7 ENSDARG00000007320 317.52 2380.13 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
46. rpl8 ENSDARG00000014867 317.52 2380.13 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. rps5 ENSDARG00000043453 317.52 2380.13 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
48. si:ch1073-429i10.3 317.52 2380.13 si:ch1073-429i10.3, transcript variant X2
49. faua ENSDARG00000099022 296.36 2221.52 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
50. frem2a ENSDARG00000076856 296.36 2221.52 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
51. id1 ENSDARG00000040764 296.36 2221.52 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
52. rps23 ENSDARG00000021838 296.36 2221.52 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
53. s100a10b ENSDARG00000025254 296.36 2221.52 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
54. apoeb ENSDARG00000040295 275.19 2062.83 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
55. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 275.19 2062.83 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
56. zgc:153129 zgc:153129 275.19 2062.83
57. zgc:165571 zgc:165571 275.19 2062.83
58. FP067396.1 FP067396.1 254.02 1904.14
59. rpl19 ENSDARG00000013307 254.02 1904.14 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
60. rpn1 ENSDARG00000059323 254.02 1904.14 ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
61. rps15 ENSDARG00000070849, ENSDARG00000110979 254.02 1904.14 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
62. rps4x ENSDARG00000014690 254.02 1904.14 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
63. rps9 ENSDARG00000011405, ENSDARG00000113248 254.02 1904.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
64. apoc1l apoc1l 232.85 1745.45
65. capns1b ENSDARG00000013804 232.85 1745.45 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
66. myh9a ENSDARG00000063295 232.85 1745.45 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
67. myl12.1 ENSDARG00000099766 232.85 1745.45 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
68. rpl21 ENSDARG00000010516, ENSDARG00000110263 232.85 1745.45 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
69. rpl36a ENSDARG00000058105, ENSDARG00000112656 232.85 1745.45 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
70. rpl6 ENSDARG00000058451 232.85 1745.45 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
71. rplp2 ENSDARG00000101406 232.85 1745.45 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
72. rps29 ENSDARG00000041232 232.85 1745.45 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
73. CU914813.1 CU914813.1 211.68 1586.76
74. cotl1 ENSDARG00000026829 211.68 1586.76 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
75. cox4i1 ENSDARG00000032970 211.68 1586.76 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
76. eef2b ENSDARG00000100371, ENSDARG00000109247 211.68 1586.76 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
77. ptgdsb ptgdsb 211.68 1586.76
78. rpl9 ENSDARG00000037350, ENSDARG00000112384 211.68 1586.76 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
79. rplp0 ENSDARG00000051783 211.68 1586.76 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
80. rplp2l ENSDARG00000011201 211.68 1586.76 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
81. rps12 ENSDARG00000036875, ENSDARG00000115157 211.68 1586.76 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
82. ywhabl ENSDARG00000040287 211.68 1586.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
83. zgc:112425 zgc:112425 211.68 1586.76
84. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 211.68 1586.76 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
85. anxa1a ENSDARG00000026726 190.51 1428.07 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
86. cd9b ENSDARG00000016691 190.51 1428.07 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
87. mt-nd1 ENSDARG00000063895 190.51 1428.07 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
88. rab2a ENSDARG00000020261 190.51 1428.07 RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
89. rpl18a ENSDARG00000025073 190.51 1428.07 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
90. rpl36 ENSDARG00000100588 190.51 1428.07 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
91. rpl38 ENSDARG00000006413 190.51 1428.07 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
92. rps19 ENSDARG00000030602 190.51 1428.07 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
93. rps27.1 ENSDARG00000023298 190.51 1428.07 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
94. rps27a ENSDARG00000032725, ENSDARG00000114059 190.51 1428.07 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
95. rps3 ENSDARG00000103007 190.51 1428.07 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
96. rps6 ENSDARG00000019778 190.51 1428.07 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
97. si:ch211-243g18.2 ENSDARG00000044261 190.51 1428.07 si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
98. si:dkeyp-86f7.3 si:dkeyp-86f7.3 190.51 1428.07
99. ahnak ENSDARG00000061764 169.35 1269.45 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
100. aqp3a ENSDARG00000003808 169.35 1269.45 aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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