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Experiment Zebrafish_40hpf_whole_embryo1, section s66.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11813.53 88554.81
2. krt4 ENSDARG00000017624, ENSDARG00000115790 8496.97 63693.71 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. actc1b ENSDARG00000099197 1617.16 12122.31 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
4. mt-co2 ENSDARG00000063908 1260.84 9451.32 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. tmsb4x ENSDARG00000077777 1233.43 9245.85 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. tpma ENSDARG00000033683 1068.97 8013.05 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
7. ckma ENSDARG00000035327, ENSDARG00000114671 986.74 7396.65 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
8. actb1 ENSDARG00000037746, ENSDARG00000113649 959.33 7191.19 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
9. mt-nd2 ENSDARG00000063899 904.52 6780.33 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. zgc:92533 zgc:92533 904.52 6780.33
11. mt-co3 ENSDARG00000063912 849.70 6369.39 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. actb2 ENSDARG00000037870 822.29 6163.93 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. ckmb ENSDARG00000040565 794.88 5958.46 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
14. eef1a1l1 ENSDARG00000020850 767.47 5752.99 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. mt-nd4 ENSDARG00000063917 767.47 5752.99 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
16. mt-atp6 ENSDARG00000063911 740.06 5547.53 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
17. col1a1b ENSDARG00000035809 685.24 5136.59 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 657.83 4931.13 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. atp2a1 ENSDARG00000020574 630.42 4725.66 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
20. eef2b ENSDARG00000100371, ENSDARG00000109247 630.42 4725.66 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
21. pvalb2 ENSDARG00000002768, ENSDARG00000114085 603.01 4520.19 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
22. col1a1a ENSDARG00000012405, ENSDARG00000116113 575.60 4314.73 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
23. ppiaa ENSDARG00000009212 520.78 3903.79 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
24. acta1b ENSDARG00000055618 493.37 3698.33 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
25. cyt1l ENSDARG00000036832 493.37 3698.33 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
26. hmga1a ENSDARG00000028335 493.37 3698.33 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
27. and3 ENSDARG00000056873 465.96 3492.86 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
28. apoc1l apoc1l 465.96 3492.86
29. rpl10a ENSDARG00000042905, ENSDARG00000115649 465.96 3492.86 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
30. mt-nd1 ENSDARG00000063895 438.55 3287.39 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. rpl18a ENSDARG00000025073 438.55 3287.39 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
32. hmgn2 ENSDARG00000099572 411.14 3081.93 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
33. krt8 ENSDARG00000058358, ENSDARG00000109279 411.14 3081.93 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
34. mt-cyb ENSDARG00000063924 411.14 3081.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. myhz2 ENSDARG00000012944 411.14 3081.93 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
36. mylz3 ENSDARG00000017441 411.14 3081.93 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
37. rps15 ENSDARG00000070849, ENSDARG00000110979 383.73 2876.46 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
38. rps23 ENSDARG00000021838 383.73 2876.46 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
39. ttna ttna 383.73 2876.46
40. rpl26 ENSDARG00000102317 356.32 2670.99 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
41. si:dkeyp-86f7.3 si:dkeyp-86f7.3 356.32 2670.99
42. BX511252.1 BX511252.1 328.91 2465.53
43. RPL29 ENSDARG00000077717 328.91 2465.53 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
44. btf3 ENSDARG00000035400, ENSDARG00000116462 328.91 2465.53 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
45. hbbe1.1 ENSDARG00000113599 328.91 2465.53 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
46. krt18 ENSDARG00000018404, ENSDARG00000109528 328.91 2465.53 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
47. myhz1.3 ENSDARG00000067997 328.91 2465.53 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
48. rpl8 ENSDARG00000014867 328.91 2465.53 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
49. rps26l ENSDARG00000030408 328.91 2465.53 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
50. rps3 ENSDARG00000103007 328.91 2465.53 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
51. si:dkey-151g10.6 si:dkey-151g10.6 328.91 2465.53
52. si:dkeyp-113d7.4 si:dkeyp-113d7.4 328.91 2465.53
53. and1 ENSDARG00000088514 301.51 2260.13 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
54. cfl1l ENSDARG00000012972 301.51 2260.13 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
55. fabp3 ENSDARG00000023290 301.51 2260.13 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
56. gch2 ENSDARG00000099101 301.51 2260.13 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
57. mt-co1 ENSDARG00000063905 301.51 2260.13 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
58. myl10 ENSDARG00000062592 301.51 2260.13 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
59. pvalb1 ENSDARG00000037789 301.51 2260.13 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
60. tnni2a.4 ENSDARG00000029069 301.51 2260.13 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
61. gnb2l1 274.10 2054.67 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
62. hdlbp hdlbp 274.10 2054.67
63. hspa8 ENSDARG00000068992, ENSDARG00000114726 274.10 2054.67 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
64. rpl23 ENSDARG00000053457 274.10 2054.67 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
65. tpm3 ENSDARG00000005162 274.10 2054.67 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
66. apoa2 ENSDARG00000015866 246.69 1849.20 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
67. eif5a2 ENSDARG00000056186 246.69 1849.20 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
68. rpl19 ENSDARG00000013307 246.69 1849.20 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
69. ttnb ttnb 246.69 1849.20
70. CABZ01074130.1 ENSDARG00000105274 219.28 1643.73
71. aldoab ENSDARG00000034470 219.28 1643.73 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
72. hbae3 ENSDARG00000079305 219.28 1643.73 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
73. hbbe3 ENSDARG00000038147, ENSDARG00000109344 219.28 1643.73 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
74. myl1 ENSDARG00000014196 219.28 1643.73 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
75. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 219.28 1643.73 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
76. pnrc2 ENSDARG00000053291, ENSDARG00000112537 219.28 1643.73 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
77. rpl21 ENSDARG00000010516, ENSDARG00000110263 219.28 1643.73 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
78. rpl35 ENSDARG00000018334 219.28 1643.73 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
79. rpl36 ENSDARG00000100588 219.28 1643.73 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
80. rps14 ENSDARG00000036629 219.28 1643.73 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
81. si:dkey-150i13.2 ENSDARG00000071052 219.28 1643.73 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
82. tmed10 ENSDARG00000041391, ENSDARG00000110672 219.28 1643.73 transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
83. RPL37A RPL37A 191.87 1438.27
84. aldoaa ENSDARG00000011665 191.87 1438.27 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
85. col1a2 ENSDARG00000020007 191.87 1438.27 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
86. hsp90ab1 ENSDARG00000029150 191.87 1438.27 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
87. id1 ENSDARG00000040764 191.87 1438.27 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
88. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 191.87 1438.27 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
89. ptmab ENSDARG00000101766 191.87 1438.27 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
90. rpl9 ENSDARG00000037350, ENSDARG00000112384 191.87 1438.27 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
91. rplp1 ENSDARG00000021864 191.87 1438.27 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
92. rplp2l ENSDARG00000011201 191.87 1438.27 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
93. rps12 ENSDARG00000036875, ENSDARG00000115157 191.87 1438.27 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
94. rps20 ENSDARG00000036044 191.87 1438.27 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
95. rps25 ENSDARG00000041811 191.87 1438.27 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
96. rps27a ENSDARG00000032725, ENSDARG00000114059 191.87 1438.27 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
97. rps4x ENSDARG00000014690 191.87 1438.27 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
98. rpsa ENSDARG00000019181 191.87 1438.27 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
99. tmem38a ENSDARG00000024047 191.87 1438.27 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
100. tuba8l ENSDARG00000042708 191.87 1438.27 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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