Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s24.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7356.14 55142.93
2. apoa1b ENSDARG00000101324 7273.49 54523.37 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 7190.83 53903.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. apoc1l apoc1l 3884.70 29120.40
5. apoa2 ENSDARG00000015866 3306.13 24783.34 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. apoeb ENSDARG00000040295 2892.86 21685.39 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. actb2 ENSDARG00000037870 1983.68 14870.02 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
8. apoa1a ENSDARG00000012076, ENSDARG00000110395 1818.37 13630.82 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
9. apobb apobb 1653.07 12391.71
10. mt-co2 ENSDARG00000063908 1570.41 11772.07 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. bhmt ENSDARG00000013430 1487.76 11152.51 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
12. mt-nd2 ENSDARG00000063899 1487.76 11152.51 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. mt-co3 ENSDARG00000063912 1157.15 8674.20 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. ckmb ENSDARG00000040565 1074.49 8054.57 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
15. tpma ENSDARG00000033683 1074.49 8054.57 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
16. zgc:161979 zgc:161979 991.84 7435.01
17. col1a1a ENSDARG00000012405, ENSDARG00000116113 909.19 6815.45 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
18. mt-atp6 ENSDARG00000063911 909.19 6815.45 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
19. actb1 ENSDARG00000037746, ENSDARG00000113649 826.53 6195.82 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
20. eef1a1l1 ENSDARG00000020850 826.53 6195.82 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. mt-nd1 ENSDARG00000063895 743.88 5576.26 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
22. pla2g12b ENSDARG00000015662 743.88 5576.26 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
23. zgc:92533 zgc:92533 743.88 5576.26
24. ckma ENSDARG00000035327, ENSDARG00000114671 661.23 4956.70 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
25. mt-cyb ENSDARG00000063924 661.23 4956.70 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. tmsb4x ENSDARG00000077777 661.23 4956.70 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
27. APOB APOB 578.57 4337.06
28. atp2a1 ENSDARG00000020574 578.57 4337.06 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
29. mt-nd4 ENSDARG00000063917 578.57 4337.06 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
30. mylz3 ENSDARG00000017441 578.57 4337.06 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
31. ptmab ENSDARG00000101766 578.57 4337.06 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
32. slc43a2b ENSDARG00000061120, ENSDARG00000117188 578.57 4337.06 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
33. gamt ENSDARG00000070844, ENSDARG00000109945 495.92 3717.50 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
34. ldhba ENSDARG00000019644 495.92 3717.50 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
35. mt-co1 ENSDARG00000063905 495.92 3717.50 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
36. pvalb1 ENSDARG00000037789 495.92 3717.50 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
37. rpl10a ENSDARG00000042905, ENSDARG00000115649 495.92 3717.50 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
38. rpl36a ENSDARG00000058105, ENSDARG00000112656 495.92 3717.50 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
39. tnnc2 ENSDARG00000070835, ENSDARG00000111155 495.92 3717.50 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
40. zgc:161979_1 zgc:161979_1 495.92 3717.50
41. apoa4 apoa4 413.27 3097.95
42. cfl1l ENSDARG00000012972 413.27 3097.95 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
43. eef2b ENSDARG00000100371, ENSDARG00000109247 413.27 3097.95 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
44. myhz1.3 ENSDARG00000067997 413.27 3097.95 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
45. myl10 ENSDARG00000062592 413.27 3097.95 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
46. pvalb2 ENSDARG00000002768, ENSDARG00000114085 413.27 3097.95 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
47. rps10 ENSDARG00000034897 413.27 3097.95 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
48. rps26l ENSDARG00000030408 413.27 3097.95 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
49. tnni2a.4 ENSDARG00000029069 413.27 3097.95 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
50. zgc:153129 zgc:153129 413.27 3097.95
51. APOA4 APOA4 330.61 2478.31
52. RPL29 ENSDARG00000077717 330.61 2478.31 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
53. actc1b ENSDARG00000099197 330.61 2478.31 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
54. ctsla ENSDARG00000007836 330.61 2478.31 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
55. eif5a ENSDARG00000017235 330.61 2478.31 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
56. hmga1a ENSDARG00000028335 330.61 2478.31 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
57. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 330.61 2478.31 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
58. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 330.61 2478.31 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
59. pabpc1a ENSDARG00000017219 330.61 2478.31 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
60. prkar2aa ENSDARG00000033184 330.61 2478.31 protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
61. rbp4 ENSDARG00000101199 330.61 2478.31 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
62. rpl5b ENSDARG00000015862, ENSDARG00000109661 330.61 2478.31 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
63. rps15 ENSDARG00000070849, ENSDARG00000110979 330.61 2478.31 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
64. si:dkey-151g10.6 si:dkey-151g10.6 330.61 2478.31
65. si:dkeyp-113d7.4 si:dkeyp-113d7.4 330.61 2478.31
66. tnnt3a ENSDARG00000030270 330.61 2478.31 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
67. tuba8l4 ENSDARG00000006260 330.61 2478.31 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
68. zgc:112425 zgc:112425 330.61 2478.31
69. BX511252.1 BX511252.1 247.96 1858.75
70. MAP1B ENSDARG00000060434, ENSDARG00000113782 247.96 1858.75 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
71. acta1b ENSDARG00000055618 247.96 1858.75 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
72. ahcy ENSDARG00000005191 247.96 1858.75 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
73. aldoaa ENSDARG00000011665 247.96 1858.75 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
74. apoea ENSDARG00000102004 247.96 1858.75 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
75. atp5a1 247.96 1858.75 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
76. c5 ENSDARG00000021004 247.96 1858.75 complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
77. capns1a ENSDARG00000035329 247.96 1858.75 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
78. clica clica 247.96 1858.75
79. fabp3 ENSDARG00000023290 247.96 1858.75 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
80. fetub ENSDARG00000053973 247.96 1858.75 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
81. fgb ENSDARG00000008969 247.96 1858.75 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
82. fth1a ENSDARG00000015551 247.96 1858.75 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
83. gapdhs ENSDARG00000039914 247.96 1858.75 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
84. hmgn2 ENSDARG00000099572 247.96 1858.75 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
85. hspa8 ENSDARG00000068992, ENSDARG00000114726 247.96 1858.75 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
86. mbpb ENSDARG00000089413 247.96 1858.75 myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
87. npc2 ENSDARG00000090912 247.96 1858.75 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
88. paics ENSDARG00000033539 247.96 1858.75 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
89. pcyt2 ENSDARG00000043003 247.96 1858.75 phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
90. pdcd10b ENSDARG00000012591 247.96 1858.75 programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
91. pfn1 ENSDARG00000088091 247.96 1858.75 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
92. ppiaa ENSDARG00000009212 247.96 1858.75 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
93. ppib ENSDARG00000092798 247.96 1858.75 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
94. pvalb9 ENSDARG00000071601, ENSDARG00000113946 247.96 1858.75 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
95. rpl19 ENSDARG00000013307 247.96 1858.75 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
96. rps3 ENSDARG00000103007 247.96 1858.75 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
97. rps7 ENSDARG00000042566 247.96 1858.75 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
98. sord ENSDARG00000053405 247.96 1858.75 sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
99. tnnt3b ENSDARG00000068457 247.96 1858.75 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
100. tpm3 ENSDARG00000005162 247.96 1858.75 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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