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Experiment Zebrafish_28hpf_whole3_PA, section s65.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 8337.65 62500.29
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2316.01 17361.16 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:112425 zgc:112425 1852.81 13888.95
4. mt-co3 ENSDARG00000063912 1621.21 12152.84 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
5. eef1a1l1 ENSDARG00000020850 1389.61 10416.73 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
6. rpl8 ENSDARG00000014867 1389.61 10416.73 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
7. si:dkey-151g10.6 si:dkey-151g10.6 1389.61 10416.73
8. mt-atp6 ENSDARG00000063911 1158.01 8680.62 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. mt-nd4 ENSDARG00000063917 1158.01 8680.62 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. hmga1a ENSDARG00000028335 926.41 6944.51 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
11. mt-nd2 ENSDARG00000063899 926.41 6944.51 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. ppiaa ENSDARG00000009212 926.41 6944.51 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
13. tmsb4x ENSDARG00000077777 926.41 6944.51 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
14. zgc:161979_1 zgc:161979_1 926.41 6944.51
15. actb2 ENSDARG00000037870 694.80 5208.33 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. apoc1l apoc1l 694.80 5208.33
17. btf3 ENSDARG00000035400, ENSDARG00000116462 694.80 5208.33 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
18. ckmb ENSDARG00000040565 694.80 5208.33 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
19. eef2b ENSDARG00000100371, ENSDARG00000109247 694.80 5208.33 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
20. he1a 694.80 5208.33 hatching enzyme 1a, transcript variant X1
21. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 694.80 5208.33 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
22. marcksb ENSDARG00000008803 694.80 5208.33 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
23. ptmab ENSDARG00000101766 694.80 5208.33 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
24. ran ENSDARG00000057026 694.80 5208.33 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
25. rps14 ENSDARG00000036629 694.80 5208.33 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
26. rps15 ENSDARG00000070849, ENSDARG00000110979 694.80 5208.33 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
27. rps3 ENSDARG00000103007 694.80 5208.33 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
28. rps6 ENSDARG00000019778 694.80 5208.33 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
29. zgc:123194 zgc:123194 694.80 5208.33
30. zgc:153129 zgc:153129 694.80 5208.33
31. AL954137.2 ENSDARG00000114408 463.20 3472.22
32. BX511252.1 BX511252.1 463.20 3472.22
33. KIF4A KIF4A 463.20 3472.22
34. arhgdia ENSDARG00000043795 463.20 3472.22 Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
35. bin2b ENSDARG00000010255 463.20 3472.22 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
36. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 463.20 3472.22 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
37. cfl1 ENSDARG00000021124 463.20 3472.22 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
38. cirbp cirbp 463.20 3472.22
39. col9a1 col9a1 463.20 3472.22
40. cox4i1 ENSDARG00000032970 463.20 3472.22 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
41. fabp3 ENSDARG00000023290 463.20 3472.22 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
42. fstl1b ENSDARG00000039576 463.20 3472.22 follistatin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3029]
43. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 463.20 3472.22 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
44. hsp90ab1 ENSDARG00000029150 463.20 3472.22 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
45. ifrd2 ENSDARG00000036811, ENSDARG00000115385 463.20 3472.22 interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
46. krt8 ENSDARG00000058358, ENSDARG00000109279 463.20 3472.22 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
47. mt-co2 ENSDARG00000063908 463.20 3472.22 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
48. mt-nd1 ENSDARG00000063895 463.20 3472.22 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
49. nucks1a ENSDARG00000078473 463.20 3472.22 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
50. pabpc1a ENSDARG00000017219 463.20 3472.22 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
51. rnd3a ENSDARG00000076799 463.20 3472.22 Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
52. rpl14 ENSDARG00000103433 463.20 3472.22 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
53. rpl15 ENSDARG00000009285 463.20 3472.22 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
54. rpl18a ENSDARG00000025073 463.20 3472.22 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
55. rpl26 ENSDARG00000102317 463.20 3472.22 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. rpl30 ENSDARG00000035871, ENSDARG00000109253 463.20 3472.22 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
57. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 463.20 3472.22 ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 463.20 3472.22 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. rps10 ENSDARG00000034897 463.20 3472.22 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
60. rps23 ENSDARG00000021838 463.20 3472.22 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
61. rps24 ENSDARG00000039347 463.20 3472.22 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
62. rps26l ENSDARG00000030408 463.20 3472.22 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
63. rps28 ENSDARG00000035860 463.20 3472.22 ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
64. rps7 ENSDARG00000042566 463.20 3472.22 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
65. rps9 ENSDARG00000011405, ENSDARG00000113248 463.20 3472.22 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
66. rpsa ENSDARG00000019181 463.20 3472.22 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
67. sec61a1 ENSDARG00000021669 463.20 3472.22 Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
68. serpina1l ENSDARG00000090850 463.20 3472.22 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
69. snrpe ENSDARG00000033175 463.20 3472.22 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
70. syne2b ENSDARG00000053484 463.20 3472.22 spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
71. tardbpl ENSDARG00000004452, ENSDARG00000116205 463.20 3472.22 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
72. tnnc2 ENSDARG00000070835, ENSDARG00000111155 463.20 3472.22 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
73. ttc27 ENSDARG00000007918 463.20 3472.22 tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
74. ttk ENSDARG00000041361 463.20 3472.22 ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
75. uba52 ENSDARG00000041435 463.20 3472.22 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
76. wdr43 ENSDARG00000077264 463.20 3472.22 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
77. zgc:174855 ENSDARG00000094559 463.20 3472.22 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
78. 5S_rRNA_21 5S_rRNA_21 231.60 1736.11
79. AP2A1 ENSDARG00000054320 231.60 1736.11 adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
80. ARF5 ENSDARG00000070472, ENSDARG00000115687 231.60 1736.11 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
81. ARID3A ENSDARG00000070843 231.60 1736.11 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
82. ATP5B 231.60 1736.11 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
83. BX571880.1 ENSDARG00000097533 231.60 1736.11
84. C3H16orf89 C3H16orf89 231.60 1736.11
85. CABZ01007794.1 CABZ01007794.1 231.60 1736.11
86. CABZ01059390.1 CABZ01059390.1 231.60 1736.11
87. CABZ01072607.1 ENSDARG00000113761 231.60 1736.11 dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
88. CABZ01073954.1 CABZ01073954.1 231.60 1736.11
89. CABZ01084579.1 CABZ01084579.1 231.60 1736.11
90. CABZ01092303.1 CABZ01092303.1 231.60 1736.11
91. CCDC71 CCDC71 231.60 1736.11
92. CCNA2 ENSDARG00000011094 231.60 1736.11 cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
93. CLCN5 CLCN5 231.60 1736.11
94. COX5B_1 ENSDARG00000015978 231.60 1736.11 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
95. CR361563.1 CR361563.1 231.60 1736.11
96. CU914813.1 CU914813.1 231.60 1736.11
97. DENND4B ENSDARG00000102914 231.60 1736.11 DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
98. E2F6 E2F6 231.60 1736.11
99. ERO1LB ERO1LB 231.60 1736.11
100. GPA33 231.60 1736.11 glycoprotein A33 (transmembrane)
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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