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Experiment Zebrafish_28hpf_whole3_PA, section s60.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 12949.06 97068.92 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 5538.53 41518.00
3. tmsb4x ENSDARG00000077777 1445.96 10839.23 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 1368.49 10258.49 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. si:dkey-151g10.6 si:dkey-151g10.6 1355.58 10161.72
6. actb2 ENSDARG00000037870 1316.85 9871.39 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. mt-nd2 ENSDARG00000063899 1045.74 7839.09 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. zgc:112425 zgc:112425 1019.92 7645.54
9. rpl23 ENSDARG00000053457 877.90 6580.93 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
10. eef2b ENSDARG00000100371, ENSDARG00000109247 800.44 6000.27 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
11. ppiaa ENSDARG00000009212 787.53 5903.49 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
12. rpl10a ENSDARG00000042905, ENSDARG00000115649 774.62 5806.72 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
13. mt-atp6 ENSDARG00000063911 735.89 5516.39 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. mt-nd4 ENSDARG00000063917 735.89 5516.39 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
15. zgc:165571 zgc:165571 722.98 5419.61
16. eef1a1l1 ENSDARG00000020850 697.16 5226.06 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mt-co3 ENSDARG00000063912 671.34 5032.51 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. krt5 ENSDARG00000058371, ENSDARG00000112017 658.43 4935.73 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
19. hmga1a ENSDARG00000028335 645.52 4838.96 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
20. rps23 ENSDARG00000021838 593.87 4451.78 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
21. actb1 ENSDARG00000037746, ENSDARG00000113649 568.05 4258.22 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
22. cyt1l ENSDARG00000036832 568.05 4258.22 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
23. rpl21 ENSDARG00000010516, ENSDARG00000110263 555.14 4161.45 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
24. rpl8 ENSDARG00000014867 542.23 4064.67 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
25. cfl1l ENSDARG00000012972 529.32 3967.90 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
26. rpl9 ENSDARG00000037350, ENSDARG00000112384 529.32 3967.90 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
27. zgc:153129 zgc:153129 529.32 3967.90
28. zgc:92533 zgc:92533 529.32 3967.90
29. hspa8 ENSDARG00000068992, ENSDARG00000114726 516.41 3871.12 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
30. rps26l ENSDARG00000030408 516.41 3871.12 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
31. rpl36 ENSDARG00000100588 503.50 3774.34 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
32. icn ENSDARG00000009978 490.59 3677.57 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
33. rpl36a ENSDARG00000058105, ENSDARG00000112656 490.59 3677.57 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
34. rps14 ENSDARG00000036629 490.59 3677.57 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
35. rps15 ENSDARG00000070849, ENSDARG00000110979 490.59 3677.57 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
36. rpl39 ENSDARG00000036316, ENSDARG00000117167 464.77 3484.02 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
37. CU914813.1 CU914813.1 438.95 3290.46
38. rpl18a ENSDARG00000025073 438.95 3290.46 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
39. rps12 ENSDARG00000036875, ENSDARG00000115157 438.95 3290.46 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
40. rps20 ENSDARG00000036044 438.95 3290.46 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
41. faua ENSDARG00000099022 426.04 3193.69 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
42. krt8 ENSDARG00000058358, ENSDARG00000109279 426.04 3193.69 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
43. icn2 ENSDARG00000055514 413.13 3096.91 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
44. rpl15 ENSDARG00000009285 400.22 3000.13 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
45. rplp1 ENSDARG00000021864 400.22 3000.13 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
46. rps29 ENSDARG00000041232 400.22 3000.13 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 387.31 2903.36 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. pabpc1a ENSDARG00000017219 387.31 2903.36 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
49. rpl26 ENSDARG00000102317 374.40 2806.58 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
50. id1 ENSDARG00000040764 361.49 2709.81 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
51. rps2 ENSDARG00000077291 361.49 2709.81 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
52. mt-nd1 ENSDARG00000063895 348.58 2613.03 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
53. rps15a ENSDARG00000010160 348.58 2613.03 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
54. rps19 ENSDARG00000030602 348.58 2613.03 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
55. rps3 ENSDARG00000103007 348.58 2613.03 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
56. si:ch1073-429i10.3 348.58 2613.03 si:ch1073-429i10.3, transcript variant X2
57. RPL29 ENSDARG00000077717 335.67 2516.25 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
58. rps27.1 ENSDARG00000023298 335.67 2516.25 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
59. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 335.67 2516.25 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
60. pcna ENSDARG00000054155 322.76 2419.48 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
61. rpl27 ENSDARG00000015128 322.76 2419.48 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
62. rplp0 ENSDARG00000051783 322.76 2419.48 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
63. rps27a ENSDARG00000032725, ENSDARG00000114059 322.76 2419.48 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
64. rps4x ENSDARG00000014690 322.76 2419.48 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
65. eif5a ENSDARG00000017235 309.85 2322.70 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
66. rpl19 ENSDARG00000013307 309.85 2322.70 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. rps10 ENSDARG00000034897 309.85 2322.70 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
68. fabp3 ENSDARG00000023290 296.94 2225.93 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
69. mt-cyb ENSDARG00000063924 296.94 2225.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
70. rpl17 ENSDARG00000057556 296.94 2225.93 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
71. hsp90ab1 ENSDARG00000029150 284.03 2129.15 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
72. rpl11 ENSDARG00000043509 284.03 2129.15 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
73. hmgn2 ENSDARG00000099572 271.12 2032.37 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
74. rplp2 ENSDARG00000101406 271.12 2032.37 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
75. rps13 ENSDARG00000036298, ENSDARG00000112818 271.12 2032.37 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
76. rps5 ENSDARG00000043453 271.12 2032.37 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
77. ATP5B 258.21 1935.60 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
78. pfn1 ENSDARG00000088091 258.21 1935.60 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
79. rpl23a ENSDARG00000006316 258.21 1935.60 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
80. rpl5b ENSDARG00000015862, ENSDARG00000109661 258.21 1935.60 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
81. rpl7 ENSDARG00000007320 258.21 1935.60 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
82. uba52 ENSDARG00000041435 245.30 1838.82 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
83. zgc:92061 zgc:92061 245.30 1838.82
84. aldoaa ENSDARG00000011665 232.39 1742.05 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
85. mt-nd3 ENSDARG00000063914 232.39 1742.05 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
86. npm1a ENSDARG00000014329, ENSDARG00000113199 232.39 1742.05 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
87. ran ENSDARG00000057026 232.39 1742.05 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
88. rpl22 ENSDARG00000070437 232.39 1742.05 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
89. col1a1a ENSDARG00000012405, ENSDARG00000116113 219.48 1645.27 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
90. rpl18 ENSDARG00000029533 219.48 1645.27 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
91. rps9 ENSDARG00000011405, ENSDARG00000113248 219.48 1645.27 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
92. zgc:123194 zgc:123194 219.48 1645.27
93. anxa1c ENSDARG00000104359 206.57 1548.49 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
94. rps24 ENSDARG00000039347 206.57 1548.49 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
95. rps7 ENSDARG00000042566 206.57 1548.49 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
96. tuba8l ENSDARG00000042708 206.57 1548.49 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
97. cirbp cirbp 193.65 1451.64
98. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 193.65 1451.64 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
99. ptmab ENSDARG00000101766 193.65 1451.64 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
100. AL954137.2 ENSDARG00000114408 180.74 1354.87
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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