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Experiment Zebrafish_28hpf_whole3_PA, section s59.

Sample reads: 133,428. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 3394.93 25443.89 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. zgc:112425 zgc:112425 2190.89 16420.01
3. AC024175.4 AC024175.4 1792.72 13435.85
4. hmga1a ENSDARG00000028335 1773.67 13293.08 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
5. actb2 ENSDARG00000037870 1564.11 11722.49 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. ppiaa ENSDARG00000009212 1418.68 10632.54 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
7. si:dkey-151g10.6 si:dkey-151g10.6 1374.23 10299.41
8. mt-co2 ENSDARG00000063908 1205.31 9033.41 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. mt-nd2 ENSDARG00000063899 1162.12 8709.71 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. ptmab ENSDARG00000101766 1122.75 8414.64 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
11. mt-nd4 ENSDARG00000063917 1027.50 7700.78 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. pcna ENSDARG00000054155 985.58 7386.60 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
13. tmsb4x ENSDARG00000077777 894.77 6706.01 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
14. id1 ENSDARG00000040764 885.25 6634.66 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
15. hspa8 ENSDARG00000068992, ENSDARG00000114726 841.43 6306.24 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
16. mt-co3 ENSDARG00000063912 805.87 6039.73 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. eef2b ENSDARG00000100371, ENSDARG00000109247 777.29 5825.53 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
18. eef1a1l1 ENSDARG00000020850 698.54 5235.33 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. mt-atp6 ENSDARG00000063911 671.87 5035.45 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
20. rpl10a ENSDARG00000042905, ENSDARG00000115649 635.04 4759.42 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
21. AL954137.2 ENSDARG00000114408 588.68 4411.96
22. hmgn2 ENSDARG00000099572 585.51 4388.21 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
23. fabp3 ENSDARG00000023290 578.52 4335.82 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
24. btf3 ENSDARG00000035400, ENSDARG00000116462 563.92 4226.40 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
25. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 544.86 4083.55 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
26. rpl18a ENSDARG00000025073 542.32 4064.51 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
27. pabpc1a ENSDARG00000017219 522.64 3917.02 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
28. zgc:123194 zgc:123194 498.51 3736.17
29. rpl23 ENSDARG00000053457 490.89 3679.06 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
30. rpl26 ENSDARG00000102317 485.81 3640.99 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
31. rpl8 ENSDARG00000014867 476.92 3574.36 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
32. rps23 ENSDARG00000021838 476.28 3569.56 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
33. actb1 ENSDARG00000037746, ENSDARG00000113649 471.20 3531.49 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. rpl21 ENSDARG00000010516, ENSDARG00000110263 467.39 3502.94 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
35. hnrnpab hnrnpab 457.86 3431.51
36. rpl9 ENSDARG00000037350, ENSDARG00000112384 434.37 3255.46 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
37. hsp90ab1 ENSDARG00000029150 411.51 3084.13 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
38. rps26l ENSDARG00000030408 404.52 3031.75 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
39. mt-nd1 ENSDARG00000063895 398.81 2988.95 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
40. rps14 ENSDARG00000036629 390.55 2927.04 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
41. si:ch1073-429i10.3 388.01 2908.01 si:ch1073-429i10.3, transcript variant X2
42. cirbp cirbp 380.39 2850.90
43. rps27a ENSDARG00000032725, ENSDARG00000114059 367.05 2750.92 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
44. h3f3a 358.80 2689.09 H3 histone, family 3A, transcript variant X1
45. rpl36a ENSDARG00000058105, ENSDARG00000112656 358.16 2684.29 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
46. mt-cyb ENSDARG00000063924 357.53 2679.57 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
47. rpl19 ENSDARG00000013307 348.00 2608.15 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
48. rplp1 ENSDARG00000021864 333.40 2498.72 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
49. rpl11 ENSDARG00000043509 326.41 2446.34 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
50. marcksb ENSDARG00000008803 321.97 2413.06 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
51. ran ENSDARG00000057026 320.06 2398.75 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
52. rpsa ENSDARG00000019181 320.06 2398.75 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
53. rpl15 ENSDARG00000009285 319.43 2394.02 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
54. khdrbs1a ENSDARG00000052856 315.62 2365.47 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
55. rpl36 ENSDARG00000100588 315.62 2365.47 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
56. eif5a ENSDARG00000017235 314.35 2355.95 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. rpl27 ENSDARG00000015128 313.71 2351.15 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
58. rps15a ENSDARG00000010160 311.81 2336.91 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
59. rps6 ENSDARG00000019778 309.26 2317.80 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
60. seta ENSDARG00000031495 308.63 2313.08 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
61. cfl1 ENSDARG00000021124 306.72 2298.77 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
62. rps4x ENSDARG00000014690 295.93 2217.90 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
63. rps10 ENSDARG00000034897 295.29 2213.10 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
64. rps15 ENSDARG00000070849, ENSDARG00000110979 285.77 2141.75 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
65. rps5 ENSDARG00000043453 285.13 2136.96 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
66. prtgb ENSDARG00000040442 283.86 2127.44 protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
67. rps2 ENSDARG00000077291 277.51 2079.85 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
68. rplp0 ENSDARG00000051783 274.34 2056.09 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
69. h3f3d ENSDARG00000045248 269.26 2018.02 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
70. rps9 ENSDARG00000011405, ENSDARG00000113248 268.62 2013.22 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
71. rps27.1 ENSDARG00000023298 264.81 1984.66 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
72. rps29 ENSDARG00000041232 255.92 1918.04 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
73. rpl39 ENSDARG00000036316, ENSDARG00000117167 253.38 1899.00 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
74. si:dkeyp-86f7.3 si:dkeyp-86f7.3 251.48 1884.76
75. eif5a2 ENSDARG00000056186 250.21 1875.24 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
76. RPL29 ENSDARG00000077717 241.95 1813.34 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
77. rpl18 ENSDARG00000029533 234.33 1756.23 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
78. rps20 ENSDARG00000036044 233.70 1751.51 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
79. rps24 ENSDARG00000039347 233.70 1751.51 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
80. rpl6 ENSDARG00000058451 233.06 1746.71 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
81. rps19 ENSDARG00000030602 233.06 1746.71 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
82. rpl5b ENSDARG00000015862, ENSDARG00000109661 231.79 1737.19 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
83. rpl7 ENSDARG00000007320 227.34 1703.84 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
84. alyref ENSDARG00000077732 224.80 1684.80 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
85. top1l ENSDARG00000070545 224.80 1684.80 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
86. faua ENSDARG00000099022 220.99 1656.25 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
87. pnrc2 ENSDARG00000053291, ENSDARG00000112537 220.99 1656.25 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
88. tuba8l ENSDARG00000042708 213.37 1599.14 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
89. rps3 ENSDARG00000103007 210.20 1575.38 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
90. fkbp1aa ENSDARG00000022684 209.56 1570.58 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
91. tuba8l4 ENSDARG00000006260 209.56 1570.58 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
92. rps12 ENSDARG00000036875, ENSDARG00000115157 208.29 1561.07 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
93. anp32a ENSDARG00000006487 207.66 1556.34 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
94. mt-co1 ENSDARG00000063905 203.21 1522.99 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
95. krt8 ENSDARG00000058358, ENSDARG00000109279 200.67 1503.96 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
96. rpl14 ENSDARG00000103433 198.13 1484.92 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
97. ppiab ENSDARG00000103994 191.78 1437.33 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
98. rpl17 ENSDARG00000057556 186.70 1399.26 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
99. rpl23a ENSDARG00000006316 186.07 1394.53 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
100. lfng ENSDARG00000037879 185.43 1389.74 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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