Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s55.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12980.27 97297.03
2. krt4 ENSDARG00000017624, ENSDARG00000115790 1532.85 11489.88 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:112425 zgc:112425 1524.34 11426.09
4. actb2 ENSDARG00000037870 1134.15 8501.32 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
5. hmga1a ENSDARG00000028335 1121.38 8405.60 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
6. ppiaa ENSDARG00000009212 1106.72 8295.71 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
7. si:dkey-151g10.6 si:dkey-151g10.6 1001.01 7503.33
8. mt-nd2 ENSDARG00000063899 990.61 7425.38 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. ptmab ENSDARG00000101766 895.54 6712.76 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
10. hspa8 ENSDARG00000068992, ENSDARG00000114726 864.09 6477.01 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
11. mt-nd4 ENSDARG00000063917 853.45 6397.26 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. eef1a1l1 ENSDARG00000020850 848.25 6358.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
13. mt-co2 ENSDARG00000063908 822.00 6161.52 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
14. mt-co3 ENSDARG00000063912 735.68 5514.48 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. pcna ENSDARG00000054155 702.34 5264.57 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
16. eef2b ENSDARG00000100371, ENSDARG00000109247 696.90 5223.80 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
17. id1 ENSDARG00000040764 691.22 5181.22 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
18. tmsb4x ENSDARG00000077777 670.89 5028.83 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
19. AL954137.2 ENSDARG00000114408 636.13 4768.28
20. pabpc1a ENSDARG00000017219 625.96 4692.05 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
21. mt-atp6 ENSDARG00000063911 565.18 4236.46 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 516.70 3873.06 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. rpl26 ENSDARG00000102317 479.81 3596.54 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
24. rpl8 ENSDARG00000014867 461.13 3456.52 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
25. hsp90ab1 ENSDARG00000029150 453.09 3396.26 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
26. rpl18a ENSDARG00000025073 438.90 3289.89 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
27. rpl9 ENSDARG00000037350, ENSDARG00000112384 434.88 3259.76 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
28. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 424.95 3185.32 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
29. btf3 ENSDARG00000035400, ENSDARG00000116462 420.93 3155.19 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
30. hmgn2 ENSDARG00000099572 417.62 3130.38 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
31. rpl23 ENSDARG00000053457 414.55 3107.37 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
32. rpl21 ENSDARG00000010516, ENSDARG00000110263 406.98 3050.63 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
33. zgc:123194 zgc:123194 389.72 2921.25
34. rps14 ENSDARG00000036629 365.83 2742.17 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
35. rpl36a ENSDARG00000058105, ENSDARG00000112656 360.63 2703.20 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
36. rps23 ENSDARG00000021838 354.72 2658.90 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
37. cirbp cirbp 349.51 2619.84
38. mt-nd1 ENSDARG00000063895 343.37 2573.82 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
39. fabp3 ENSDARG00000023290 341.71 2561.38 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. rpl19 ENSDARG00000013307 340.53 2552.53 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
41. actb1 ENSDARG00000037746, ENSDARG00000113649 340.06 2549.01 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
42. rps26l ENSDARG00000030408 335.80 2517.08 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
43. si:ch1073-429i10.3 327.99 2458.54 si:ch1073-429i10.3, transcript variant X2
44. eif5a ENSDARG00000017235 326.58 2447.97 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
45. rpl11 ENSDARG00000043509 322.56 2417.83 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
46. rplp1 ENSDARG00000021864 319.48 2394.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
47. hnrnpab hnrnpab 303.64 2276.01
48. rps27a ENSDARG00000032725, ENSDARG00000114059 299.38 2244.08 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
49. mt-cyb ENSDARG00000063924 295.83 2217.47 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
50. h3f3a 291.34 2183.82 H3 histone, family 3A, transcript variant X1
51. rps9 ENSDARG00000011405, ENSDARG00000113248 289.92 2173.17 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
52. rps2 ENSDARG00000077291 288.74 2164.33 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
53. rpl15 ENSDARG00000009285 287.08 2151.88 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
54. rpsa ENSDARG00000019181 284.48 2132.39 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
55. rps6 ENSDARG00000019778 284.01 2128.87 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
56. rpl27 ENSDARG00000015128 281.41 2109.38 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
57. cfl1 ENSDARG00000021124 279.28 2093.42 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
58. rps3 ENSDARG00000103007 276.68 2073.93 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
59. rps27.1 ENSDARG00000023298 272.19 2040.27 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
60. rpl18 ENSDARG00000029533 265.56 1990.57 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
61. rplp0 ENSDARG00000051783 264.86 1985.33 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
62. rps10 ENSDARG00000034897 263.91 1978.21 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
63. rps29 ENSDARG00000041232 260.84 1955.19 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
64. rpl5b ENSDARG00000015862, ENSDARG00000109661 260.60 1953.40 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
65. ran ENSDARG00000057026 253.98 1903.77 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
66. khdrbs1a ENSDARG00000052856 249.48 1870.04 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
67. rps15a ENSDARG00000010160 249.01 1866.52 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
68. rps4x ENSDARG00000014690 244.52 1832.86 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
69. rps5 ENSDARG00000043453 243.34 1824.02 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
70. npm1a ENSDARG00000014329, ENSDARG00000113199 239.32 1793.89 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
71. pnrc2 ENSDARG00000053291, ENSDARG00000112537 238.84 1790.29 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
72. rpl36 ENSDARG00000100588 235.06 1761.95 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
73. krt8 ENSDARG00000058358, ENSDARG00000109279 231.98 1738.87 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
74. rps15 ENSDARG00000070849, ENSDARG00000110979 231.75 1737.14 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
75. hbbe3 ENSDARG00000038147, ENSDARG00000109344 230.57 1728.30 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
76. mt-co1 ENSDARG00000063905 226.07 1694.57 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
77. rps20 ENSDARG00000036044 223.71 1676.88 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
78. si:dkeyp-86f7.3 si:dkeyp-86f7.3 223.24 1673.35
79. RPL29 ENSDARG00000077717 222.05 1664.43 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
80. eif5a2 ENSDARG00000056186 219.92 1648.47 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
81. rpl7 ENSDARG00000007320 218.27 1636.10 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
82. top1l ENSDARG00000070545 212.36 1591.80 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
83. tuba8l ENSDARG00000042708 209.05 1566.99 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
84. anp32a ENSDARG00000006487 208.10 1559.87 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
85. seta ENSDARG00000031495 208.10 1559.87 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
86. h3f3d ENSDARG00000045248 206.68 1549.22 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
87. rps12 ENSDARG00000036875, ENSDARG00000115157 205.97 1543.90 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
88. rpl17 ENSDARG00000057556 196.28 1471.27 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
89. faua ENSDARG00000099022 191.55 1435.81 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
90. rps19 ENSDARG00000030602 190.84 1430.49 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
91. marcksb ENSDARG00000008803 190.36 1426.89 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
92. rpl6 ENSDARG00000058451 190.36 1426.89 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
93. hnrnpa0a ENSDARG00000089302 186.34 1396.76 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
94. tuba8l4 ENSDARG00000006260 184.93 1386.19 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
95. rpl39 ENSDARG00000036316, ENSDARG00000117167 184.45 1382.59 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
96. apoa1b ENSDARG00000101324 179.49 1345.41 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
97. ubc ENSDARG00000102632 178.78 1340.09 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
98. rps24 ENSDARG00000039347 174.99 1311.68 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
99. marcksl1b ENSDARG00000035715 173.57 1301.04 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
100. gnb2l1 171.45 1285.15 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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