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Experiment Zebrafish_28hpf_whole3_PA, section s52.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15778.78 118271.62
2. krt4 ENSDARG00000017624, ENSDARG00000115790 1743.99 13072.27 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:112425 zgc:112425 1361.34 10204.08
4. ppiaa ENSDARG00000009212 1095.88 8214.29 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
5. si:dkey-151g10.6 si:dkey-151g10.6 1042.90 7817.17
6. actb2 ENSDARG00000037870 850.24 6373.07 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. hmga1a ENSDARG00000028335 784.25 5878.43 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
8. mt-nd2 ENSDARG00000063899 773.59 5798.53 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. mt-co2 ENSDARG00000063908 770.04 5771.92 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. tmsb4x ENSDARG00000077777 753.47 5647.72 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. eef1a1l1 ENSDARG00000020850 747.85 5605.59 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. mt-co3 ENSDARG00000063912 722.10 5412.58 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. mt-nd4 ENSDARG00000063917 702.86 5268.37 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. hspa8 ENSDARG00000068992, ENSDARG00000114726 689.55 5168.60 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
15. hbbe3 ENSDARG00000038147, ENSDARG00000109344 589.22 4416.56 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
16. ptmab ENSDARG00000101766 577.38 4327.82 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
17. eef2b ENSDARG00000100371, ENSDARG00000109247 571.76 4285.69 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
18. rpl10a ENSDARG00000042905, ENSDARG00000115649 538.91 4039.46 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
19. pcna ENSDARG00000054155 523.82 3926.35 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
20. he1a 522.63 3917.43 hatching enzyme 1a, transcript variant X1
21. rpl26 ENSDARG00000102317 522.34 3915.26 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
22. id1 ENSDARG00000040764 474.69 3558.09 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
23. mt-atp6 ENSDARG00000063911 454.27 3405.03 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
24. AL954137.2 ENSDARG00000114408 432.96 3245.30
25. rpl18a ENSDARG00000025073 432.96 3245.30 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
26. pabpc1a ENSDARG00000017219 420.83 3154.38 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
27. rpl8 ENSDARG00000014867 402.19 3014.66 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
28. btf3 ENSDARG00000035400, ENSDARG00000116462 393.90 2952.52 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
29. rpl21 ENSDARG00000010516, ENSDARG00000110263 383.25 2872.69 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
30. rpl23 ENSDARG00000053457 382.65 2868.20 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
31. rpl9 ENSDARG00000037350, ENSDARG00000112384 378.51 2837.16 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
32. hbae3 ENSDARG00000079305 371.11 2781.70 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
33. rps23 ENSDARG00000021838 356.91 2675.26 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
34. rps14 ENSDARG00000036629 351.28 2633.06 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
35. rpl36a ENSDARG00000058105, ENSDARG00000112656 348.32 2610.87 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
36. hmgn2 ENSDARG00000099572 347.73 2606.45 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
37. zgc:174855 ENSDARG00000094559 344.77 2584.26 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
38. rpl19 ENSDARG00000013307 343.29 2573.17 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
39. rpl11 ENSDARG00000043509 331.16 2482.25 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
40. hsp90ab1 ENSDARG00000029150 330.86 2480.00 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
41. rpl15 ENSDARG00000009285 319.03 2391.33 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
42. ctslb ENSDARG00000039173, ENSDARG00000074306 316.36 2371.31 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
43. zgc:123194 zgc:123194 307.78 2307.00
44. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 307.19 2302.58 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
45. rps26l ENSDARG00000030408 304.23 2280.39 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
46. rps2 ENSDARG00000077291 302.75 2269.30 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
47. rps27a ENSDARG00000032725, ENSDARG00000114059 299.79 2247.11 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
48. h3f3a 296.53 2222.67 H3 histone, family 3A, transcript variant X1
49. rps27.1 ENSDARG00000023298 296.24 2220.50 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
50. mt-cyb ENSDARG00000063924 293.87 2202.74 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
51. mt-nd1 ENSDARG00000063895 293.87 2202.74 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
52. apoa1b ENSDARG00000101324 290.32 2176.13 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
53. actb1 ENSDARG00000037746, ENSDARG00000113649 289.43 2169.46 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
54. eif5a ENSDARG00000017235 289.43 2169.46 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
55. rps10 ENSDARG00000034897 287.06 2151.69 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
56. rplp1 ENSDARG00000021864 282.03 2113.99 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
57. rplp0 ENSDARG00000051783 280.26 2100.72 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
58. rpl27 ENSDARG00000015128 279.37 2094.05 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
59. rps9 ENSDARG00000011405, ENSDARG00000113248 277.89 2082.96 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
60. tpma ENSDARG00000033683 277.00 2076.28 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
61. hnrnpab hnrnpab 272.56 2043.00
62. rps29 ENSDARG00000041232 267.24 2003.13 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
63. si:dkeyp-86f7.3 si:dkeyp-86f7.3 264.57 1983.11
64. ran ENSDARG00000057026 261.02 1956.50 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
65. apoc1l apoc1l 253.92 1903.29
66. zgc:161979_1 zgc:161979_1 253.33 1898.86
67. rpl5b ENSDARG00000015862, ENSDARG00000109661 251.85 1887.77 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
68. CABZ01044814.2 CABZ01044814.2 251.55 1885.52
69. rpsa ENSDARG00000019181 250.37 1876.68 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
70. si:ch1073-429i10.3 248.89 1865.58 si:ch1073-429i10.3, transcript variant X2
71. rps6 ENSDARG00000019778 247.41 1854.49 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
72. cirbp cirbp 245.04 1836.72
73. rpl36 ENSDARG00000100588 242.97 1821.21 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
74. fabp3 ENSDARG00000023290 241.79 1812.36 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
75. rps20 ENSDARG00000036044 234.68 1759.07 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
76. rps15a ENSDARG00000010160 234.09 1754.65 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
77. rpl18 ENSDARG00000029533 232.61 1743.55 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
78. faua ENSDARG00000099022 231.43 1734.71 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
79. apoa2 ENSDARG00000015866 230.24 1725.79 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
80. rps4x ENSDARG00000014690 230.24 1725.79 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
81. cfl1 ENSDARG00000021124 228.76 1714.70 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
82. rps15 ENSDARG00000070849, ENSDARG00000110979 222.84 1670.32 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
83. zgc:161979 zgc:161979 217.81 1632.62
84. pnrc2 ENSDARG00000053291, ENSDARG00000112537 214.85 1610.43 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
85. RPL29 ENSDARG00000077717 212.49 1592.74 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
86. apobb apobb 212.49 1592.74
87. wu:fa26c03 203.31 1523.93 wu:fa26c03
88. rps12 ENSDARG00000036875, ENSDARG00000115157 201.83 1512.84 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
89. khdrbs1a ENSDARG00000052856 199.76 1497.32 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
90. rps3 ENSDARG00000103007 195.62 1466.29 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
91. top1l ENSDARG00000070545 193.55 1450.78 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
92. rpl17 ENSDARG00000057556 192.95 1446.28 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
93. rps5 ENSDARG00000043453 189.11 1417.50 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
94. rps19 ENSDARG00000030602 186.74 1399.73 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
95. marcksb ENSDARG00000008803 186.15 1395.31 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
96. apoa1a ENSDARG00000012076, ENSDARG00000110395 185.26 1388.64 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
97. rpl39 ENSDARG00000036316, ENSDARG00000117167 182.89 1370.87 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
98. wu:fb37b09 wu:fb37b09 182.60 1368.70
99. rpl7 ENSDARG00000007320 181.71 1362.03 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
100. krt8 ENSDARG00000058358, ENSDARG00000109279 179.93 1348.69 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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