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Experiment Zebrafish_28hpf_whole3_PA, section s47.

Sample reads: 133,391. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18817.70 141071.23
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3405.93 25533.34 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1045.60 7838.58 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. zgc:161979_1 zgc:161979_1 1041.35 7806.72
5. actb2 ENSDARG00000037870 1007.31 7551.53 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. apoa2 ENSDARG00000015866 960.51 7200.68 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. hbbe3 ENSDARG00000038147, ENSDARG00000109344 956.26 7168.82 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
8. mt-nd4 ENSDARG00000063917 953.06 7144.83 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. tpma ENSDARG00000033683 948.81 7112.97 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
10. si:dkey-151g10.6 si:dkey-151g10.6 940.30 7049.18
11. apoc1l apoc1l 891.37 6682.36
12. apoa1b ENSDARG00000101324 858.40 6435.19 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
13. mt-nd2 ENSDARG00000063899 828.61 6211.87 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. mt-co2 ENSDARG00000063908 799.89 5996.56 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. apoeb ENSDARG00000040295 777.56 5829.16 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
16. zgc:161979 zgc:161979 767.98 5757.34
17. mt-co3 ENSDARG00000063912 763.73 5725.48 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. apobb apobb 748.84 5613.85
19. ckma ENSDARG00000035327, ENSDARG00000114671 704.16 5278.90 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
20. ppiaa ENSDARG00000009212 687.14 5151.30 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
21. hbae3 ENSDARG00000079305 664.80 4983.83 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
22. apoa1a ENSDARG00000012076, ENSDARG00000110395 658.42 4936.00 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
23. eef1a1l1 ENSDARG00000020850 626.51 4696.78 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
24. he1a 587.16 4401.78 hatching enzyme 1a, transcript variant X1
25. zgc:112425 zgc:112425 574.39 4306.05
26. actc1b ENSDARG00000099197 513.76 3851.52 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
27. hspa8 ENSDARG00000068992, ENSDARG00000114726 487.17 3652.18 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
28. atp2a1 ENSDARG00000020574 473.34 3548.50 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
29. mt-atp6 ENSDARG00000063911 473.34 3548.50 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
30. ckmb ENSDARG00000040565 464.83 3484.71 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 442.49 3317.23 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. ctslb ENSDARG00000039173, ENSDARG00000074306 427.60 3205.60 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
33. hmga1a ENSDARG00000028335 419.09 3141.80 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
34. eef2b ENSDARG00000100371, ENSDARG00000109247 410.58 3078.01 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
35. zgc:174855 ENSDARG00000094559 401.01 3006.26 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
36. zgc:153129 zgc:153129 377.61 2830.84
37. btf3 ENSDARG00000035400, ENSDARG00000116462 366.97 2751.08 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
38. fabp2 ENSDARG00000006427, ENSDARG00000110230 366.97 2751.08 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
39. actb1 ENSDARG00000037746, ENSDARG00000113649 344.63 2583.60 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
40. rpl8 ENSDARG00000014867 336.13 2519.88 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. bhmt ENSDARG00000013430 331.87 2487.94 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
42. mt-nd1 ENSDARG00000063895 328.68 2464.03 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
43. rpl23 ENSDARG00000053457 325.49 2440.11 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. pvalb2 ENSDARG00000002768, ENSDARG00000114085 312.72 2344.38 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
45. pabpc1a ENSDARG00000017219 309.53 2320.46 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
46. AL935210.1 ENSDARG00000088330 307.41 2304.57 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
47. mt-cyb ENSDARG00000063924 304.21 2280.58 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
48. tnnc2 ENSDARG00000070835, ENSDARG00000111155 303.15 2272.63 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
49. rps14 ENSDARG00000036629 301.02 2256.67 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
50. rpl18a ENSDARG00000025073 298.90 2240.77 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
51. apoa4 apoa4 295.71 2216.86
52. rpl26 ENSDARG00000102317 294.64 2208.84 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
53. mylz3 ENSDARG00000017441 293.58 2200.89 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
54. CABZ01044814.2 CABZ01044814.2 285.07 2137.09
55. ptmab ENSDARG00000101766 285.07 2137.09 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
56. rps26l ENSDARG00000030408 280.81 2105.16 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
57. krt8 ENSDARG00000058358, ENSDARG00000109279 279.75 2097.21 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
58. rpl21 ENSDARG00000010516, ENSDARG00000110263 275.50 2065.35 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
59. rpl9 ENSDARG00000037350, ENSDARG00000112384 275.50 2065.35 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
60. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 274.43 2057.33 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
61. hbbe1.1 ENSDARG00000113599 272.30 2041.36 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
62. wu:fa26c03 270.18 2025.47 wu:fa26c03
63. rps23 ENSDARG00000021838 260.60 1953.65 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
64. rpl36a ENSDARG00000058105, ENSDARG00000112656 257.41 1929.73 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
65. ctsla ENSDARG00000007836 256.35 1921.79 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
66. rpl19 ENSDARG00000013307 254.22 1905.82 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. rpl11 ENSDARG00000043509 240.39 1802.14 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
68. rps2 ENSDARG00000077291 234.01 1754.31 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
69. rpl15 ENSDARG00000009285 231.88 1738.34 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
70. rps27a ENSDARG00000032725, ENSDARG00000114059 230.82 1730.40 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
71. eif5a ENSDARG00000017235 227.63 1706.48 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
72. hbae1_1 226.57 1698.53 hemoglobin, alpha embryonic 1
73. rps10 ENSDARG00000034897 224.44 1682.57 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
74. rps27.1 ENSDARG00000023298 219.12 1642.68 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
75. rplp0 ENSDARG00000051783 218.06 1634.74 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
76. rplp1 ENSDARG00000021864 214.86 1610.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
77. si:dkey-269i1.3 213.80 1602.80 si:dkey-269i1.3
78. wu:fb37b09 wu:fb37b09 211.67 1586.83
79. rpl36 ENSDARG00000100588 207.42 1554.97 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
80. si:dkey-150i13.2 ENSDARG00000071052 207.42 1554.97 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
81. rps12 ENSDARG00000036875, ENSDARG00000115157 205.29 1539.00 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
82. pcna ENSDARG00000054155 201.04 1507.14 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
83. rps6 ENSDARG00000019778 199.97 1499.12 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
84. zgc:174153 ENSDARG00000079376 199.97 1499.12 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
85. rps20 ENSDARG00000036044 189.34 1419.43 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
86. rps4x ENSDARG00000014690 189.34 1419.43 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
87. rps9 ENSDARG00000011405, ENSDARG00000113248 188.27 1411.41 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
88. rps29 ENSDARG00000041232 186.15 1395.52 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
89. fabp3 ENSDARG00000023290 181.89 1363.58 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
90. rpl27 ENSDARG00000015128 181.89 1363.58 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
91. RPL29 ENSDARG00000077717 179.76 1347.61 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
92. id1 ENSDARG00000040764 179.76 1347.61 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
93. zgc:66286 zgc:66286 178.70 1339.67
94. cirbp cirbp 173.38 1299.78
95. rps15 ENSDARG00000070849, ENSDARG00000110979 173.38 1299.78 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
96. rps3 ENSDARG00000103007 170.19 1275.87 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
97. cyt1l ENSDARG00000036832 169.13 1267.92 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
98. rps15a ENSDARG00000010160 169.13 1267.92 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
99. rpl5b ENSDARG00000015862, ENSDARG00000109661 167.00 1251.95 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
100. gamt ENSDARG00000070844, ENSDARG00000109945 165.94 1244.01 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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