Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s40.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18666.44 139923.77
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4527.00 33934.43 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 1927.09 14445.48
4. zgc:161979_1 zgc:161979_1 1905.56 14284.09
5. apoa1b ENSDARG00000101324 1851.35 13877.73 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. apobb apobb 1576.58 11818.06
7. apoeb ENSDARG00000040295 1543.16 11567.54 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 1449.59 10866.14 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa2 ENSDARG00000015866 1304.04 9775.09 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. tpma ENSDARG00000033683 1131.01 8478.06 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. mt-nd2 ENSDARG00000063899 1119.87 8394.55 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1109.47 8316.60 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. mt-nd4 ENSDARG00000063917 1089.42 8166.30 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. zgc:161979 zgc:161979 1088.68 8160.75
15. actb2 ENSDARG00000037870 972.09 7286.79 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. mt-co2 ENSDARG00000063908 966.89 7247.81 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
17. mt-atp6 ENSDARG00000063911 797.57 5978.59 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
18. mt-co3 ENSDARG00000063912 773.81 5800.49 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
19. ckma ENSDARG00000035327, ENSDARG00000114671 724.80 5433.11 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
20. atp2a1 ENSDARG00000020574 625.28 4687.10 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
21. si:dkey-151g10.6 si:dkey-151g10.6 612.66 4592.50
22. fabp2 ENSDARG00000006427, ENSDARG00000110230 611.17 4581.33 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
23. ckmb ENSDARG00000040565 591.12 4431.04 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
24. bhmt ENSDARG00000013430 588.15 4408.78 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
25. actc1b ENSDARG00000099197 585.18 4386.51 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
26. zgc:153129 zgc:153129 568.10 4258.48
27. eef1a1l1 ENSDARG00000020850 541.37 4058.11 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. apoa4 apoa4 528.74 3963.44
29. mylz3 ENSDARG00000017441 471.56 3534.82 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
30. si:dkey-150i13.2 ENSDARG00000071052 465.62 3490.29 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
31. mt-nd1 ENSDARG00000063895 448.54 3362.26 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
32. pvalb2 ENSDARG00000002768, ENSDARG00000114085 441.86 3312.19 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
33. actb1 ENSDARG00000037746, ENSDARG00000113649 439.63 3295.47 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. ctsla ENSDARG00000007836 417.35 3128.46 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
35. eef2b ENSDARG00000100371, ENSDARG00000109247 403.98 3028.24 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
36. mt-cyb ENSDARG00000063924 386.90 2900.21 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. ppiaa ENSDARG00000009212 369.82 2772.17 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
38. zgc:112425 zgc:112425 357.94 2683.12
39. hspa8 ENSDARG00000068992, ENSDARG00000114726 354.97 2660.86 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
40. tnnc2 ENSDARG00000070835, ENSDARG00000111155 351.26 2633.05 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
41. aldob ENSDARG00000053684 316.36 2371.44 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
42. hmga1a ENSDARG00000028335 310.41 2326.84 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. pabpc1a ENSDARG00000017219 297.79 2232.24 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
44. btf3 ENSDARG00000035400, ENSDARG00000116462 293.33 2198.80 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
45. rbp4 ENSDARG00000101199 293.33 2198.80 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
46. krt8 ENSDARG00000058358, ENSDARG00000109279 277.00 2076.39 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
47. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271.80 2037.41 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
48. rpl10a ENSDARG00000042905, ENSDARG00000115649 268.83 2015.15 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
49. myhz1.3 ENSDARG00000067997 266.60 1998.44 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
50. pla2g12b ENSDARG00000015662 264.37 1981.72 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
51. rpl23 ENSDARG00000053457 255.46 1914.93 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
52. rps26l ENSDARG00000030408 245.06 1836.97 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
53. ttna ttna 244.32 1831.42
54. rpl26 ENSDARG00000102317 242.84 1820.33 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
55. apoc2 ENSDARG00000092155 241.35 1809.16 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
56. dbi ENSDARG00000026369 235.41 1764.64 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
57. fetub ENSDARG00000053973 230.95 1731.20 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
58. sepp1a 230.21 1725.66 selenoprotein P, plasma, 1a
59. rpl18a ENSDARG00000025073 226.50 1697.85 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
60. gatm ENSDARG00000036239 222.04 1664.41 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
61. acta1b ENSDARG00000055618 220.56 1653.32 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
62. gamt ENSDARG00000070844, ENSDARG00000109945 219.07 1642.15 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
63. rpl36a ENSDARG00000058105, ENSDARG00000112656 214.62 1608.79 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
64. rpl8 ENSDARG00000014867 208.68 1564.27 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
65. pvalb9 ENSDARG00000071601, ENSDARG00000113946 207.19 1553.10 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
66. rps23 ENSDARG00000021838 205.71 1542.00 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
67. paics ENSDARG00000033539 200.51 1503.02 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
68. eif5a ENSDARG00000017235 197.54 1480.76 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
69. zgc:66286 zgc:66286 196.05 1469.59
70. mt-co1 ENSDARG00000063905 190.85 1430.61 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
71. rpl11 ENSDARG00000043509 188.62 1413.90 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. zgc:92533 zgc:92533 185.65 1391.63
73. cfl1l ENSDARG00000012972 181.94 1363.82 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
74. APOB APOB 181.20 1358.28
75. npc2 ENSDARG00000090912 181.20 1358.28 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
76. rpl21 ENSDARG00000010516, ENSDARG00000110263 181.20 1358.28 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
77. rps14 ENSDARG00000036629 180.46 1352.73 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
78. gapdh ENSDARG00000043457 177.49 1330.47 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
79. tfa ENSDARG00000016771 176.74 1324.84 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
80. ttnb ttnb 176.00 1319.30
81. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 174.52 1308.20 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
82. acta1a ENSDARG00000036371 173.03 1297.03 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
83. tpm3 ENSDARG00000005162 170.06 1274.77 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
84. ahcy ENSDARG00000005191 169.32 1269.22 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
85. ptmab ENSDARG00000101766 169.32 1269.22 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
86. fabp3 ENSDARG00000023290 168.57 1263.60 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
87. myl10 ENSDARG00000062592 168.57 1263.60 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
88. rpl9 ENSDARG00000037350, ENSDARG00000112384 166.35 1246.96 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
89. slc43a2b ENSDARG00000061120, ENSDARG00000117188 165.60 1241.34 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
90. col1a1b ENSDARG00000035809 164.86 1235.79 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
91. cyt1l ENSDARG00000036832 160.41 1202.43 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
92. tnnt3a ENSDARG00000030270 160.41 1202.43 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
93. rps27.1 ENSDARG00000023298 158.18 1185.72 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
94. myl1 ENSDARG00000014196 155.95 1169.00 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
95. rpl39 ENSDARG00000036316, ENSDARG00000117167 155.21 1163.46 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
96. krt5 ENSDARG00000058371, ENSDARG00000112017 153.72 1152.29 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
97. rps3 ENSDARG00000103007 153.72 1152.29 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
98. RPL29 ENSDARG00000077717 151.49 1135.57 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
99. rps20 ENSDARG00000036044 151.49 1135.57 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
100. si:ch211-226o13.2 151.49 1135.57 si:ch211-226o13.2
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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