Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s37.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9112.77 68314.18
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3141.49 23550.28 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2395.07 17954.72 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckma ENSDARG00000035327, ENSDARG00000114671 2140.80 16048.58 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. mt-co2 ENSDARG00000063908 1632.26 12236.29 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 1566.64 11744.37 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-nd4 ENSDARG00000063917 1443.61 10822.07 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. actc1b ENSDARG00000099197 1394.39 10453.09 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. ckmb ENSDARG00000040565 1336.98 10022.71 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. mt-co3 ENSDARG00000063912 1263.16 9469.32 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. mylz3 ENSDARG00000017441 1230.35 9223.36 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
12. atp2a1 ENSDARG00000020574 1172.93 8792.91 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-atp6 ENSDARG00000063911 1140.12 8546.95 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. actb2 ENSDARG00000037870 992.48 7440.16 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. si:dkey-151g10.6 si:dkey-151g10.6 820.23 6148.88
16. eef1a1l1 ENSDARG00000020850 795.62 5964.39 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mt-nd1 ENSDARG00000063895 779.22 5841.45 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
18. rps26l ENSDARG00000030408 623.38 4673.19 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
19. apoc1l apoc1l 615.17 4611.64
20. zgc:161979_1 zgc:161979_1 606.97 4550.17
21. ppiaa ENSDARG00000009212 598.77 4488.70 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 598.77 4488.70 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. hspa8 ENSDARG00000068992, ENSDARG00000114726 590.57 4427.23 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
24. tnnc2 ENSDARG00000070835, ENSDARG00000111155 590.57 4427.23 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
25. pvalb2 ENSDARG00000002768, ENSDARG00000114085 582.36 4365.68 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
26. apoa1b ENSDARG00000101324 557.76 4181.27 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
27. tmsb4x ENSDARG00000077777 549.55 4119.72 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
28. apobb apobb 533.15 3996.78
29. myhz1.3 ENSDARG00000067997 500.34 3750.82 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 492.14 3689.34 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. zgc:112425 zgc:112425 483.94 3627.87
32. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 467.53 3504.85 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
33. acta1b ENSDARG00000055618 442.92 3320.36 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
34. ttna ttna 442.92 3320.36
35. rpl18a ENSDARG00000025073 434.72 3258.89 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. hmga1a ENSDARG00000028335 426.52 3197.42 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. mt-cyb ENSDARG00000063924 426.52 3197.42 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
38. apoeb ENSDARG00000040295 377.31 2828.52 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
39. rpl39 ENSDARG00000036316, ENSDARG00000117167 377.31 2828.52 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
40. rps23 ENSDARG00000021838 377.31 2828.52 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
41. ttnb ttnb 377.31 2828.52
42. zgc:153129 zgc:153129 369.10 2766.97
43. acta1a ENSDARG00000036371 352.70 2644.03 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
44. ptmab ENSDARG00000101766 352.70 2644.03 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
45. rpl8 ENSDARG00000014867 352.70 2644.03 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
46. apoa2 ENSDARG00000015866 344.50 2582.56 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 344.50 2582.56 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. krt8 ENSDARG00000058358, ENSDARG00000109279 344.50 2582.56 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
49. pabpc1a ENSDARG00000017219 336.29 2521.01 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
50. eif5a ENSDARG00000017235 328.09 2459.54 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
51. rpl26 ENSDARG00000102317 319.89 2398.07 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
52. rps14 ENSDARG00000036629 319.89 2398.07 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
53. hsp90ab1 ENSDARG00000029150 303.49 2275.12 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
54. faua ENSDARG00000099022 295.28 2213.58 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
55. rps27.1 ENSDARG00000023298 295.28 2213.58 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
56. rps6 ENSDARG00000019778 295.28 2213.58 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
57. zgc:161979 zgc:161979 295.28 2213.58
58. actb1 ENSDARG00000037746, ENSDARG00000113649 287.08 2152.10 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
59. atp5g3b 287.08 2152.10 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
60. fabp3 ENSDARG00000023290 287.08 2152.10 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
61. rpl36a ENSDARG00000058105, ENSDARG00000112656 287.08 2152.10 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
62. tnni2a.4 ENSDARG00000029069 287.08 2152.10 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
63. rps27a ENSDARG00000032725, ENSDARG00000114059 278.88 2090.63 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
64. rps9 ENSDARG00000011405, ENSDARG00000113248 278.88 2090.63 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
65. apoa1a ENSDARG00000012076, ENSDARG00000110395 270.68 2029.16 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
66. myl1 ENSDARG00000014196 270.68 2029.16 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
67. myl10 ENSDARG00000062592 270.68 2029.16 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
68. rpl15 ENSDARG00000009285 270.68 2029.16 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
69. rps15 ENSDARG00000070849, ENSDARG00000110979 270.68 2029.16 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
70. rps15a ENSDARG00000010160 270.68 2029.16 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
71. rps20 ENSDARG00000036044 270.68 2029.16 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
72. rps2 ENSDARG00000077291 262.47 1967.61 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
73. si:ch211-226o13.2 262.47 1967.61 si:ch211-226o13.2
74. rps3 ENSDARG00000103007 254.27 1906.14 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
75. tnnt3b ENSDARG00000068457 254.27 1906.14 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
76. bhmt ENSDARG00000013430 246.07 1844.67 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
77. rpl19 ENSDARG00000013307 246.07 1844.67 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
78. rpl23 ENSDARG00000053457 246.07 1844.67 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
79. zgc:66286 zgc:66286 246.07 1844.67
80. pvalb1 ENSDARG00000037789 237.87 1783.20 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
81. rpsa ENSDARG00000019181 237.87 1783.20 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
82. tpm3 ENSDARG00000005162 237.87 1783.20 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
83. cirbp cirbp 229.66 1721.65
84. mt-co1 ENSDARG00000063905 229.66 1721.65 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
85. rps12 ENSDARG00000036875, ENSDARG00000115157 229.66 1721.65 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
86. aldoab ENSDARG00000034470 221.46 1660.18 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
87. hsp90aa1.1 ENSDARG00000010478 221.46 1660.18 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
88. rpl14 ENSDARG00000103433 221.46 1660.18 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
89. rpl21 ENSDARG00000010516, ENSDARG00000110263 221.46 1660.18 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
90. rpl9 ENSDARG00000037350, ENSDARG00000112384 221.46 1660.18 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
91. tnnt3a ENSDARG00000030270 221.46 1660.18 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
92. COX5B_1 ENSDARG00000015978 213.26 1598.71 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
93. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 213.26 1598.71 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
94. rpl11 ENSDARG00000043509 205.06 1537.24 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
95. rpl36 ENSDARG00000100588 205.06 1537.24 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
96. rplp1 ENSDARG00000021864 205.06 1537.24 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
97. rps10 ENSDARG00000034897 205.06 1537.24 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
98. rps5 ENSDARG00000043453 205.06 1537.24 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
99. tnnt2c ENSDARG00000032242 205.06 1537.24 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
100. col1a1b ENSDARG00000035809 196.86 1475.77 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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