Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole3_PA, section s35.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 10979.94 82303.55
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2652.99 19886.31 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. ckma ENSDARG00000035327, ENSDARG00000114671 2293.55 17192.02 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
4. tpma ENSDARG00000033683 2276.43 17063.69 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. mt-co3 ENSDARG00000063912 1754.39 13150.57 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
6. actc1b ENSDARG00000099197 1480.54 11097.85 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
7. mt-co2 ENSDARG00000063908 1335.05 10007.28 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-nd4 ENSDARG00000063917 1335.05 10007.28 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. mt-nd2 ENSDARG00000063899 1326.49 9943.12 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. ckmb ENSDARG00000040565 1292.26 9686.54 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
11. mt-atp6 ENSDARG00000063911 1292.26 9686.54 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. atp2a1 ENSDARG00000020574 1001.29 7505.48 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. apoc1l apoc1l 992.73 7441.32
14. actb2 ENSDARG00000037870 864.36 6479.08 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. tmsb4x ENSDARG00000077777 795.90 5965.92 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
16. mylz3 ENSDARG00000017441 787.34 5901.75 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. zgc:112425 zgc:112425 787.34 5901.75
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 778.78 5837.59 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. ppiaa ENSDARG00000009212 718.87 5388.51 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
20. si:dkey-151g10.6 si:dkey-151g10.6 718.87 5388.51
21. pvalb2 ENSDARG00000002768, ENSDARG00000114085 650.41 4875.35 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
22. rpl18a ENSDARG00000025073 650.41 4875.35 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
23. apoa2 ENSDARG00000015866 633.29 4747.02 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
24. eef1a1l1 ENSDARG00000020850 624.74 4682.93 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. hmga1a ENSDARG00000028335 599.06 4490.44 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
26. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 590.50 4426.28 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
27. rps26l ENSDARG00000030408 590.50 4426.28 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 556.27 4169.69 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. myhz1.3 ENSDARG00000067997 556.27 4169.69 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
30. mt-nd1 ENSDARG00000063895 539.16 4041.44 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
31. zgc:161979_1 zgc:161979_1 496.37 3720.70
32. eef2b ENSDARG00000100371, ENSDARG00000109247 487.81 3656.53 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
33. apoa1b ENSDARG00000101324 462.13 3464.04 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
34. apoeb ENSDARG00000040295 462.13 3464.04 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
35. rpl10a ENSDARG00000042905, ENSDARG00000115649 453.57 3399.87 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
36. rps27a ENSDARG00000032725, ENSDARG00000114059 436.46 3271.62 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
37. apobb apobb 427.90 3207.46
38. acta1b ENSDARG00000055618 402.23 3015.04 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
39. apoa1a ENSDARG00000012076, ENSDARG00000110395 393.67 2950.88 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
40. btf3 ENSDARG00000035400, ENSDARG00000116462 393.67 2950.88 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
41. rpl23 ENSDARG00000053457 393.67 2950.88 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
42. rps20 ENSDARG00000036044 393.67 2950.88 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
43. rps23 ENSDARG00000021838 393.67 2950.88 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
44. zgc:161979 zgc:161979 376.55 2822.55
45. rpl8 ENSDARG00000014867 367.99 2758.38 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
46. rps14 ENSDARG00000036629 367.99 2758.38 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
47. rpl15 ENSDARG00000009285 359.44 2694.29 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
48. ttnb ttnb 359.44 2694.29
49. bhmt ENSDARG00000013430 342.32 2565.97 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
50. fabp3 ENSDARG00000023290 342.32 2565.97 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
51. rps6 ENSDARG00000019778 342.32 2565.97 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
52. ttna ttna 342.32 2565.97
53. mt-cyb ENSDARG00000063924 325.20 2437.64 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
54. myl1 ENSDARG00000014196 325.20 2437.64 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
55. rpl36 ENSDARG00000100588 325.20 2437.64 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
56. zgc:66286 zgc:66286 325.20 2437.64
57. rps27.1 ENSDARG00000023298 316.65 2373.55 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
58. rplp0 ENSDARG00000051783 308.09 2309.38 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
59. acta1a ENSDARG00000036371 299.53 2245.22 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
60. myl10 ENSDARG00000062592 299.53 2245.22 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
61. rpl21 ENSDARG00000010516, ENSDARG00000110263 290.97 2181.06 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
62. rpl39 ENSDARG00000036316, ENSDARG00000117167 290.97 2181.06 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
63. zgc:153129 zgc:153129 290.97 2181.06
64. rps3 ENSDARG00000103007 282.41 2116.89 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
65. rpl19 ENSDARG00000013307 273.86 2052.80 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
66. rpl6 ENSDARG00000058451 273.86 2052.80 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
67. rps10 ENSDARG00000034897 273.86 2052.80 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
68. rps9 ENSDARG00000011405, ENSDARG00000113248 273.86 2052.80 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
69. atp5g3b 265.30 1988.64 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
70. tnnt2c ENSDARG00000032242 265.30 1988.64 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
71. rpl9 ENSDARG00000037350, ENSDARG00000112384 256.74 1924.47 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
72. rps5 ENSDARG00000043453 256.74 1924.47 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
73. actb1 ENSDARG00000037746, ENSDARG00000113649 248.18 1860.31 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
74. aldoab ENSDARG00000034470 248.18 1860.31 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
75. eif5a ENSDARG00000017235 248.18 1860.31 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
76. mylpfb ENSDARG00000002589 248.18 1860.31 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
77. rplp1 ENSDARG00000021864 248.18 1860.31 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
78. rps12 ENSDARG00000036875, ENSDARG00000115157 248.18 1860.31 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
79. rpl26 ENSDARG00000102317 239.62 1796.15 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
80. rpl36a ENSDARG00000058105, ENSDARG00000112656 239.62 1796.15 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
81. tnnt3a ENSDARG00000030270 239.62 1796.15 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
82. tnni2a.4 ENSDARG00000029069 231.07 1732.06 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
83. tpm3 ENSDARG00000005162 231.07 1732.06 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
84. faua ENSDARG00000099022 222.51 1667.89 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
85. ptmab ENSDARG00000101766 222.51 1667.89 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
86. rpl18 ENSDARG00000029533 222.51 1667.89 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
87. krt8 ENSDARG00000058358, ENSDARG00000109279 213.95 1603.73 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
88. rps15a ENSDARG00000010160 213.95 1603.73 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
89. rps2 ENSDARG00000077291 213.95 1603.73 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
90. fabp2 ENSDARG00000006427, ENSDARG00000110230 205.39 1539.56 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
91. rps4x ENSDARG00000014690 205.39 1539.56 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
92. ATP5B 196.83 1475.40 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
93. rpl11 ENSDARG00000043509 196.83 1475.40 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
94. rps29 ENSDARG00000041232 196.83 1475.40 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
95. si:ch211-226o13.2 196.83 1475.40 si:ch211-226o13.2
96. smyhc1 ENSDARG00000099959, ENSDARG00000115916 196.83 1475.40 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
97. col1a1b ENSDARG00000035809 188.28 1411.31 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
98. ctsla ENSDARG00000007836 188.28 1411.31 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
99. gapdh ENSDARG00000043457 188.28 1411.31 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
100. si:ch1073-429i10.3 188.28 1411.31 si:ch1073-429i10.3, transcript variant X2
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA