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Experiment Zebrafish_28hpf_whole3_PA, section s34.

Sample reads: 133,398. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 6507.23 48780.70
2. ckma ENSDARG00000035327, ENSDARG00000114671 2848.48 21353.30 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 2748.24 20601.87 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. tpma ENSDARG00000033683 2380.69 17846.57 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. ckmb ENSDARG00000040565 1904.56 14277.32 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-co3 ENSDARG00000063912 1704.08 12774.44 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
7. mt-co2 ENSDARG00000063908 1637.25 12273.46 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. actc1b ENSDARG00000099197 1612.19 12085.60 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. mt-nd2 ENSDARG00000063899 1503.60 11271.56 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. mt-nd4 ENSDARG00000063917 1261.35 9455.57 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
11. mt-atp6 ENSDARG00000063911 1244.64 9330.30 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. atp2a1 ENSDARG00000020574 1227.94 9205.11 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mylz3 ENSDARG00000017441 1035.81 7764.83 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. si:dkey-151g10.6 si:dkey-151g10.6 960.63 7201.25
15. apoc1l apoc1l 885.45 6637.67
16. actb2 ENSDARG00000037870 877.10 6575.08 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. eef1a1l1 ENSDARG00000020850 793.56 5948.83 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. apobb apobb 751.80 5635.78
19. tnnc2 ENSDARG00000070835, ENSDARG00000111155 668.26 5009.53 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
20. myhz1.3 ENSDARG00000067997 651.56 4884.34 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
21. pvalb2 ENSDARG00000002768, ENSDARG00000114085 618.15 4633.89 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
22. apoeb ENSDARG00000040295 593.09 4446.03 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
23. mt-nd1 ENSDARG00000063895 584.73 4383.36 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. apoa1b ENSDARG00000101324 576.38 4320.77 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
25. tmsb4x ENSDARG00000077777 568.03 4258.17 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
26. hspa8 ENSDARG00000068992, ENSDARG00000114726 542.97 4070.31 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
27. rpl18a ENSDARG00000025073 542.97 4070.31 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
28. zgc:161979_1 zgc:161979_1 534.61 4007.64
29. btf3 ENSDARG00000035400, ENSDARG00000116462 526.26 3945.05 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
30. eef2b ENSDARG00000100371, ENSDARG00000109247 526.26 3945.05 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
31. hmga1a ENSDARG00000028335 517.91 3882.45 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
32. zgc:112425 zgc:112425 517.91 3882.45
33. apoa2 ENSDARG00000015866 509.55 3819.78 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
34. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 501.20 3757.19 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
35. ppiaa ENSDARG00000009212 476.14 3569.33 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
36. apoa1a ENSDARG00000012076, ENSDARG00000110395 442.73 3318.87 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
37. ttna ttna 442.73 3318.87
38. fabp3 ENSDARG00000023290 434.37 3256.20 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
39. mt-cyb ENSDARG00000063924 434.37 3256.20 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
40. rpl19 ENSDARG00000013307 426.02 3193.61 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
41. rps26l ENSDARG00000030408 426.02 3193.61 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
42. rpl10a ENSDARG00000042905, ENSDARG00000115649 417.67 3131.02 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
43. rpl8 ENSDARG00000014867 417.67 3131.02 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
44. si:ch211-226o13.2 384.25 2880.49 si:ch211-226o13.2
45. zgc:161979 zgc:161979 384.25 2880.49
46. acta1b ENSDARG00000055618 375.90 2817.89 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
47. myl10 ENSDARG00000062592 375.90 2817.89 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. zgc:153129 zgc:153129 375.90 2817.89
49. rps23 ENSDARG00000021838 367.55 2755.30 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
50. atp5g3b 359.19 2692.63 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
51. acta1a ENSDARG00000036371 350.84 2630.03 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
52. rps14 ENSDARG00000036629 342.49 2567.44 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
53. tpm3 ENSDARG00000005162 342.49 2567.44 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
54. bhmt ENSDARG00000013430 334.13 2504.77 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
55. rpl26 ENSDARG00000102317 334.13 2504.77 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. rpl23 ENSDARG00000053457 325.78 2442.17 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
57. ttnb ttnb 317.43 2379.58
58. actb1 ENSDARG00000037746, ENSDARG00000113649 300.72 2254.31 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
59. rpl15 ENSDARG00000009285 300.72 2254.31 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
60. rps3 ENSDARG00000103007 300.72 2254.31 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
61. rpsa ENSDARG00000019181 300.72 2254.31 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
62. tnnt3b ENSDARG00000068457 292.37 2191.72 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
63. myl1 ENSDARG00000014196 284.01 2129.05 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
64. rps27a ENSDARG00000032725, ENSDARG00000114059 284.01 2129.05 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
65. hbbe3 ENSDARG00000038147, ENSDARG00000109344 275.66 2066.45 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
66. rps27.1 ENSDARG00000023298 275.66 2066.45 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
67. eif5a ENSDARG00000017235 267.31 2003.86 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. krt8 ENSDARG00000058358, ENSDARG00000109279 267.31 2003.86 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
69. rpl11 ENSDARG00000043509 267.31 2003.86 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
70. rps10 ENSDARG00000034897 267.31 2003.86 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
71. aldoab ENSDARG00000034470 258.95 1941.19 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
72. ctsla ENSDARG00000007836 258.95 1941.19 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
73. rpl39 ENSDARG00000036316, ENSDARG00000117167 258.95 1941.19 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
74. tnni2b.1 ENSDARG00000035958 258.95 1941.19 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
75. zgc:66286 zgc:66286 250.60 1878.59
76. col2a1a ENSDARG00000069093, ENSDARG00000111202 242.25 1816.00 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
77. rpl21 ENSDARG00000010516, ENSDARG00000110263 242.25 1816.00 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
78. rpl36a ENSDARG00000058105, ENSDARG00000112656 242.25 1816.00 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
79. rps6 ENSDARG00000019778 242.25 1816.00 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
80. hsp90aa1.1 ENSDARG00000010478 233.89 1753.33 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
81. rpl36 ENSDARG00000100588 233.89 1753.33 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
82. rps12 ENSDARG00000036875, ENSDARG00000115157 233.89 1753.33 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
83. rps2 ENSDARG00000077291 233.89 1753.33 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. rpl9 ENSDARG00000037350, ENSDARG00000112384 225.54 1690.73 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
85. mt-co1 ENSDARG00000063905 217.19 1628.14 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
86. pabpc1a ENSDARG00000017219 217.19 1628.14 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
87. rplp0 ENSDARG00000051783 217.19 1628.14 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
88. si:ch1073-429i10.3 217.19 1628.14 si:ch1073-429i10.3, transcript variant X2
89. si:dkeyp-86f7.3 si:dkeyp-86f7.3 217.19 1628.14
90. tnnt3a ENSDARG00000030270 217.19 1628.14 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
91. ATP5B 208.83 1565.47 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
92. cfl1l ENSDARG00000012972 208.83 1565.47 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
93. gapdh ENSDARG00000043457 208.83 1565.47 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
94. tnni2a.4 ENSDARG00000029069 208.83 1565.47 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
95. ptmab ENSDARG00000101766 200.48 1502.88 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
96. rpl5b ENSDARG00000015862, ENSDARG00000109661 200.48 1502.88 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
97. rps13 ENSDARG00000036298, ENSDARG00000112818 200.48 1502.88 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
98. rps4x ENSDARG00000014690 200.48 1502.88 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
99. rps9 ENSDARG00000011405, ENSDARG00000113248 200.48 1502.88 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
100. cox4i1 ENSDARG00000032970 192.13 1440.28 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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