Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s33.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9074.00 68018.28
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3110.04 23312.71 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2314.23 17347.36 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckma ENSDARG00000035327, ENSDARG00000114671 1920.91 14399.05 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. mt-co3 ENSDARG00000063912 1710.52 12821.98 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
6. actc1b ENSDARG00000099197 1417.81 10627.84 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
7. mt-co2 ENSDARG00000063908 1390.37 10422.15 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-nd2 ENSDARG00000063899 1225.72 9187.94 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. ckmb ENSDARG00000040565 1216.57 9119.35 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. si:dkey-151g10.6 si:dkey-151g10.6 1179.99 8845.15
11. mt-atp6 ENSDARG00000063911 1152.54 8639.39 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. atp2a1 ENSDARG00000020574 1015.34 7610.94 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-nd4 ENSDARG00000063917 997.04 7473.76 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. actb2 ENSDARG00000037870 933.01 6993.80 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. zgc:161979_1 zgc:161979_1 905.57 6788.11
16. eef1a1l1 ENSDARG00000020850 841.54 6308.14 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. ppiaa ENSDARG00000009212 841.54 6308.14 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. mylz3 ENSDARG00000017441 823.25 6171.04 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
19. tmsb4x ENSDARG00000077777 740.92 5553.90 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
20. eef2b ENSDARG00000100371, ENSDARG00000109247 704.33 5279.62 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
21. apoc1l apoc1l 695.19 5211.11
22. apoa2 ENSDARG00000015866 676.89 5073.94 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
23. mt-nd1 ENSDARG00000063895 676.89 5073.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. rpl10a ENSDARG00000042905, ENSDARG00000115649 649.45 4868.25 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
25. rpl18a ENSDARG00000025073 603.71 4525.38 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
26. apoa1b ENSDARG00000101324 567.12 4251.10 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
27. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 567.12 4251.10 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
28. rps26l ENSDARG00000030408 539.68 4045.42 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
29. tnnc2 ENSDARG00000070835, ENSDARG00000111155 521.39 3908.31 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
30. myhz1.3 ENSDARG00000067997 512.24 3839.73 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
31. pvalb2 ENSDARG00000002768, ENSDARG00000114085 493.95 3702.63 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
32. zgc:112425 zgc:112425 493.95 3702.63
33. btf3 ENSDARG00000035400, ENSDARG00000116462 475.65 3565.45 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
34. mt-cyb ENSDARG00000063924 466.51 3496.94 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. apoa1a ENSDARG00000012076, ENSDARG00000110395 457.36 3428.35 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
36. apoeb ENSDARG00000040295 457.36 3428.35 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
37. actb1 ENSDARG00000037746, ENSDARG00000113649 439.06 3291.17 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
38. rps14 ENSDARG00000036629 420.77 3154.07 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
39. rpl19 ENSDARG00000013307 411.62 3085.48 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
40. myl10 ENSDARG00000062592 402.48 3016.97 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
41. rpl26 ENSDARG00000102317 402.48 3016.97 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
42. eif5a ENSDARG00000017235 393.33 2948.38 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
43. hspa8 ENSDARG00000068992, ENSDARG00000114726 393.33 2948.38 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
44. zgc:161979 zgc:161979 393.33 2948.38
45. acta1a ENSDARG00000036371 384.18 2879.80 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
46. zgc:66286 zgc:66286 384.18 2879.80
47. aldoab ENSDARG00000034470 375.03 2811.21 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
48. rps6 ENSDARG00000019778 375.03 2811.21 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
49. ptmab ENSDARG00000101766 365.89 2742.69 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
50. hmga1a ENSDARG00000028335 347.59 2605.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
51. rpl36a ENSDARG00000058105, ENSDARG00000112656 347.59 2605.52 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
52. atp5g3b 338.45 2537.01 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
53. rpl15 ENSDARG00000009285 338.45 2537.01 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
54. tpm3 ENSDARG00000005162 338.45 2537.01 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
55. zgc:153129 zgc:153129 338.45 2537.01
56. bhmt ENSDARG00000013430 329.30 2468.42 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
57. rpl21 ENSDARG00000010516, ENSDARG00000110263 329.30 2468.42 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
58. acta1b ENSDARG00000055618 311.00 2331.24 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
59. hsp90aa1.1 ENSDARG00000010478 311.00 2331.24 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
60. rpl8 ENSDARG00000014867 311.00 2331.24 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
61. rps23 ENSDARG00000021838 301.86 2262.73 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
62. rpl11 ENSDARG00000043509 292.71 2194.14 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
63. rpl23 ENSDARG00000053457 292.71 2194.14 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
64. rps9 ENSDARG00000011405, ENSDARG00000113248 292.71 2194.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
65. pabpc1a ENSDARG00000017219 283.56 2125.55 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
66. rps15a ENSDARG00000010160 283.56 2125.55 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
67. rps20 ENSDARG00000036044 283.56 2125.55 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
68. rps4x ENSDARG00000014690 283.56 2125.55 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
69. tnni2a.4 ENSDARG00000029069 283.56 2125.55 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
70. apobb apobb 274.42 2057.04
71. col1a1b ENSDARG00000035809 274.42 2057.04 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
72. rpl9 ENSDARG00000037350, ENSDARG00000112384 274.42 2057.04 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
73. rps15 ENSDARG00000070849, ENSDARG00000110979 274.42 2057.04 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
74. rps3 ENSDARG00000103007 274.42 2057.04 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
75. tnnt3a ENSDARG00000030270 274.42 2057.04 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
76. ATP5B 265.27 1988.45 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
77. fabp3 ENSDARG00000023290 265.27 1988.45 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
78. rps2 ENSDARG00000077291 265.27 1988.45 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
79. si:ch211-226o13.2 265.27 1988.45 si:ch211-226o13.2
80. ttna ttna 265.27 1988.45
81. mt-co1 ENSDARG00000063905 256.12 1919.86 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
82. tnnt2c ENSDARG00000032242 256.12 1919.86 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
83. rpl39 ENSDARG00000036316, ENSDARG00000117167 246.97 1851.28 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
84. krt8 ENSDARG00000058358, ENSDARG00000109279 237.83 1782.76 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
85. rpl34 ENSDARG00000029500 237.83 1782.76 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
86. rpl36 ENSDARG00000100588 228.68 1714.17 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
87. rplp0 ENSDARG00000051783 228.68 1714.17 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
88. hbbe3 ENSDARG00000038147, ENSDARG00000109344 219.53 1645.59 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
89. hmgn2 ENSDARG00000099572 219.53 1645.59 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
90. myl1 ENSDARG00000014196 219.53 1645.59 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
91. rpsa ENSDARG00000019181 219.53 1645.59 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
92. tnni2b.1 ENSDARG00000035958 219.53 1645.59 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
93. rpl5b ENSDARG00000015862, ENSDARG00000109661 210.38 1577.00 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
94. rpl6 ENSDARG00000058451 210.38 1577.00 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
95. rps10 ENSDARG00000034897 210.38 1577.00 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
96. ttnb ttnb 210.38 1577.00
97. atp5g1 201.24 1508.49 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
98. cfl1l ENSDARG00000012972 201.24 1508.49 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
99. nme2b.2 ENSDARG00000099420 201.24 1508.49 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
100. rps13 ENSDARG00000036298, ENSDARG00000112818 201.24 1508.49 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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