Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s31.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 14925.45 111884.12
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2929.56 21960.56 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1918.19 14379.13 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckma ENSDARG00000035327, ENSDARG00000114671 1844.27 13825.01 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. mt-nd2 ENSDARG00000063899 1701.85 12757.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. ckmb ENSDARG00000040565 1507.15 11297.89 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
7. mt-atp6 ENSDARG00000063911 1218.70 9135.62 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. actc1b ENSDARG00000099197 1216.90 9122.12 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. mt-co2 ENSDARG00000063908 1164.61 8730.15 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. atp2a1 ENSDARG00000020574 1087.09 8149.04 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
11. mt-nd4 ENSDARG00000063917 1072.67 8040.95 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. si:dkey-151g10.6 si:dkey-151g10.6 948.28 7108.49
13. mt-co3 ENSDARG00000063912 939.26 7040.88 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. mylz3 ENSDARG00000017441 885.18 6635.48 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
15. actb2 ENSDARG00000037870 807.66 6054.38 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. eef1a1l1 ENSDARG00000020850 778.81 5838.11 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. tmsb4x ENSDARG00000077777 730.14 5473.27 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
18. hspa8 ENSDARG00000068992, ENSDARG00000114726 636.39 4770.51 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
19. mt-nd1 ENSDARG00000063895 605.74 4540.75 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
20. tnnc2 ENSDARG00000070835, ENSDARG00000111155 567.88 4256.94 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
21. rpl18a ENSDARG00000025073 540.84 4054.24 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
22. actb1 ENSDARG00000037746, ENSDARG00000113649 539.04 4040.75 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
23. myhz1.3 ENSDARG00000067997 537.24 4027.26 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
24. apoc1l apoc1l 533.63 4000.20
25. apoa1b ENSDARG00000101324 524.62 3932.66 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
26. ppiaa ENSDARG00000009212 501.18 3756.94 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
27. zgc:112425 zgc:112425 475.94 3567.74
28. zgc:161979_1 zgc:161979_1 475.94 3567.74
29. fabp3 ENSDARG00000023290 472.34 3540.75 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
30. rpl10a ENSDARG00000042905, ENSDARG00000115649 472.34 3540.75 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
31. apoeb ENSDARG00000040295 468.73 3513.69 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
32. zgc:161979 zgc:161979 466.93 3500.20
33. eef2b ENSDARG00000100371, ENSDARG00000109247 448.90 3365.04 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
34. zgc:66286 zgc:66286 447.10 3351.55
35. apobb apobb 441.69 3311.00
36. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 438.08 3283.93 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
37. acta1a ENSDARG00000036371 436.28 3270.44 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 430.87 3229.89 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. rpl8 ENSDARG00000014867 429.07 3216.39 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
40. acta1b ENSDARG00000055618 421.86 3162.35 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
41. mt-cyb ENSDARG00000063924 420.05 3148.78 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
42. hmga1a ENSDARG00000028335 412.84 3094.73 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. apoa2 ENSDARG00000015866 411.04 3081.24 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
44. rpl23 ENSDARG00000053457 400.22 3000.13 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
45. rpl9 ENSDARG00000037350, ENSDARG00000112384 373.18 2797.43 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
46. pvalb2 ENSDARG00000002768, ENSDARG00000114085 369.58 2770.44 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
47. myl10 ENSDARG00000062592 351.55 2635.29 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. rpl26 ENSDARG00000102317 346.14 2594.73 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
49. ttna ttna 346.14 2594.73
50. zgc:153129 zgc:153129 328.11 2459.58
51. hsp90aa1.1 ENSDARG00000010478 324.51 2432.59 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
52. rpl36a ENSDARG00000058105, ENSDARG00000112656 324.51 2432.59 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
53. myl1 ENSDARG00000014196 322.70 2419.02 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
54. rps23 ENSDARG00000021838 320.90 2405.53 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
55. rpl19 ENSDARG00000013307 311.89 2337.99 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
56. eif5a ENSDARG00000017235 295.66 2216.33 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 293.86 2202.83 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. rpl21 ENSDARG00000010516, ENSDARG00000110263 290.25 2175.77 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
59. rpl11 ENSDARG00000043509 288.45 2162.28 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
60. ttnb ttnb 284.84 2135.22
61. rps3 ENSDARG00000103007 275.83 2067.68 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
62. rps14 ENSDARG00000036629 266.82 2000.14 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
63. tnnt3a ENSDARG00000030270 263.21 1973.07 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
64. rps26l ENSDARG00000030408 261.41 1959.58 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
65. rps6 ENSDARG00000019778 259.60 1946.01 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
66. rps9 ENSDARG00000011405, ENSDARG00000113248 257.80 1932.52 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
67. rps20 ENSDARG00000036044 250.59 1878.47 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
68. rps27a ENSDARG00000032725, ENSDARG00000114059 246.98 1851.41 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
69. tnni2b.1 ENSDARG00000035958 246.98 1851.41 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
70. rpl27 ENSDARG00000015128 243.38 1824.42 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
71. tpm3 ENSDARG00000005162 243.38 1824.42 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
72. rps15 ENSDARG00000070849, ENSDARG00000110979 237.97 1783.87 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
73. rpl5b ENSDARG00000015862, ENSDARG00000109661 236.17 1770.38 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
74. rpl7 ENSDARG00000007320 223.55 1675.77 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
75. rplp1 ENSDARG00000021864 223.55 1675.77 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
76. ATP5B 221.75 1662.28 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
77. krt8 ENSDARG00000058358, ENSDARG00000109279 221.75 1662.28 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
78. rpsa ENSDARG00000019181 221.75 1662.28 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
79. ptmab ENSDARG00000101766 216.34 1621.73 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
80. RPL29 ENSDARG00000077717 214.53 1608.16 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
81. aldoab ENSDARG00000034470 212.73 1594.67 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
82. rpl15 ENSDARG00000009285 210.93 1581.17 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
83. rps2 ENSDARG00000077291 210.93 1581.17 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. rps10 ENSDARG00000034897 209.13 1567.68 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
85. rps12 ENSDARG00000036875, ENSDARG00000115157 209.13 1567.68 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
86. rps15a ENSDARG00000010160 209.13 1567.68 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
87. rps19 ENSDARG00000030602 209.13 1567.68 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
88. rps4x ENSDARG00000014690 209.13 1567.68 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. mt-co1 ENSDARG00000063905 205.52 1540.62 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
90. rpl36 ENSDARG00000100588 205.52 1540.62 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
91. si:ch211-226o13.2 205.52 1540.62 si:ch211-226o13.2
92. rplp0 ENSDARG00000051783 203.72 1527.13 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
93. rps29 ENSDARG00000041232 201.91 1513.56 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
94. atp5g3b 200.11 1500.06 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
95. smyhc1 ENSDARG00000099959, ENSDARG00000115916 200.11 1500.06 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
96. id1 ENSDARG00000040764 198.31 1486.57 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
97. tnnt2c ENSDARG00000032242 198.31 1486.57 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
98. faua ENSDARG00000099022 196.51 1473.08 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. pabpc1a ENSDARG00000017219 192.90 1446.02 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
100. tnni2a.4 ENSDARG00000029069 192.90 1446.02 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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