Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s27.

Sample reads: 133,390. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 10300.24 77218.90
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3349.95 25113.93 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1972.04 14784.00 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1686.09 12640.29 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co2 ENSDARG00000063908 1454.95 10907.48 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd4 ENSDARG00000063917 1334.94 10007.79 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. mt-co3 ENSDARG00000063912 1170.48 8774.86 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1167.52 8752.67 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. ckmb ENSDARG00000040565 1117.14 8374.98 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. si:dkey-151g10.6 si:dkey-151g10.6 1115.66 8363.89
11. actc1b ENSDARG00000099197 1109.74 8319.51 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
12. mt-atp6 ENSDARG00000063911 1062.32 7964.01 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. atp2a1 ENSDARG00000020574 856.38 6420.11 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. tmsb4x ENSDARG00000077777 797.11 5975.78 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
15. mt-nd1 ENSDARG00000063895 788.22 5909.13 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. ppiaa ENSDARG00000009212 774.89 5809.20 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
17. actb2 ENSDARG00000037870 770.44 5775.84 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. zgc:161979_1 zgc:161979_1 733.40 5498.16
19. mylz3 ENSDARG00000017441 728.96 5464.87 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
20. eef1a1l1 ENSDARG00000020850 726.00 5442.68 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. tnnc2 ENSDARG00000070835, ENSDARG00000111155 685.99 5142.73 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
22. apoc1l apoc1l 665.25 4987.25
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 613.39 4598.47 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. apobb apobb 583.76 4376.34
25. zgc:112425 zgc:112425 579.31 4342.97
26. apoa1b ENSDARG00000101324 560.05 4198.59 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
27. apoeb ENSDARG00000040295 558.57 4187.49 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 546.72 4098.65 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. zgc:161979 zgc:161979 537.83 4032.01
30. apoa2 ENSDARG00000015866 523.01 3920.90 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
31. rpl23 ENSDARG00000053457 512.64 3843.16 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
32. hmga1a ENSDARG00000028335 503.75 3776.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. mt-cyb ENSDARG00000063924 500.79 3754.33 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 500.79 3754.33 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
35. rpl18a ENSDARG00000025073 493.38 3698.77 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. zgc:66286 zgc:66286 493.38 3698.77
37. btf3 ENSDARG00000035400, ENSDARG00000116462 485.97 3643.22 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
38. eef2b ENSDARG00000100371, ENSDARG00000109247 472.64 3543.29 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
39. rps26l ENSDARG00000030408 472.64 3543.29 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
40. rpl8 ENSDARG00000014867 460.78 3454.38 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. acta1a ENSDARG00000036371 459.30 3443.28 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
42. rpl19 ENSDARG00000013307 453.38 3398.90 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
43. myhz1.3 ENSDARG00000067997 431.15 3232.25 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
44. rpl26 ENSDARG00000102317 431.15 3232.25 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
45. acta1b ENSDARG00000055618 419.30 3143.41 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
46. actb1 ENSDARG00000037746, ENSDARG00000113649 400.04 2999.02 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
47. myl10 ENSDARG00000062592 395.59 2965.66 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. rpl36a ENSDARG00000058105, ENSDARG00000112656 394.11 2954.57 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
49. rps23 ENSDARG00000021838 388.19 2910.19 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
50. rpl21 ENSDARG00000010516, ENSDARG00000110263 386.70 2899.01 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
51. rpl9 ENSDARG00000037350, ENSDARG00000112384 365.96 2743.53 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
52. rplp1 ENSDARG00000021864 358.55 2687.98 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
53. fabp3 ENSDARG00000023290 334.85 2510.31 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
54. rps14 ENSDARG00000036629 330.40 2476.94 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
55. rps20 ENSDARG00000036044 325.96 2443.66 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
56. rps29 ENSDARG00000041232 318.55 2388.11 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 317.07 2377.01 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. hsp90aa1.1 ENSDARG00000010478 315.59 2365.92 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
59. rps27a ENSDARG00000032725, ENSDARG00000114059 306.70 2299.27 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
60. rps2 ENSDARG00000077291 305.21 2288.10 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
61. rpl11 ENSDARG00000043509 303.73 2277.00 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. rpl36 ENSDARG00000100588 302.25 2265.91 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
63. zgc:153129 zgc:153129 300.77 2254.81
64. rps3 ENSDARG00000103007 299.29 2243.72 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
65. rpl18 ENSDARG00000029533 297.81 2232.62 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
66. aldoab ENSDARG00000034470 294.84 2210.36 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
67. eif5a ENSDARG00000017235 294.84 2210.36 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. rpl27 ENSDARG00000015128 294.84 2210.36 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
69. ttna ttna 278.55 2088.24
70. rps12 ENSDARG00000036875, ENSDARG00000115157 271.14 2032.68 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
71. rps6 ENSDARG00000019778 266.69 1999.32 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
72. tnni2b.1 ENSDARG00000035958 266.69 1999.32 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
73. rps15 ENSDARG00000070849, ENSDARG00000110979 262.25 1966.04 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
74. rps15a ENSDARG00000010160 262.25 1966.04 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
75. rplp0 ENSDARG00000051783 259.28 1943.77 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
76. rps9 ENSDARG00000011405, ENSDARG00000113248 259.28 1943.77 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
77. rpsa ENSDARG00000019181 259.28 1943.77 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
78. tpm3 ENSDARG00000005162 251.88 1888.30 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
79. rps5 ENSDARG00000043453 244.47 1832.74 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
80. myl1 ENSDARG00000014196 242.99 1821.65 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
81. rps19 ENSDARG00000030602 242.99 1821.65 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
82. tnnt3a ENSDARG00000030270 242.99 1821.65 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
83. rpl6 ENSDARG00000058451 240.02 1799.38 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
84. ctsla ENSDARG00000007836 238.54 1788.29 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
85. pvalb2 ENSDARG00000002768, ENSDARG00000114085 237.06 1777.19 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
86. rps27.1 ENSDARG00000023298 237.06 1777.19 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
87. rpl7 ENSDARG00000007320 234.10 1755.00 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. myhz2 ENSDARG00000012944 231.13 1732.74 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
89. rpl5b ENSDARG00000015862, ENSDARG00000109661 231.13 1732.74 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
90. rps10 ENSDARG00000034897 231.13 1732.74 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
91. mt-nd3 ENSDARG00000063914 229.65 1721.64 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
92. rpl15 ENSDARG00000009285 229.65 1721.64 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
93. atp5g3b 226.69 1699.45 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
94. rps4x ENSDARG00000014690 226.69 1699.45 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
95. tnnt2c ENSDARG00000032242 225.21 1688.36 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
96. id1 ENSDARG00000040764 219.28 1643.90 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
97. ptmab ENSDARG00000101766 211.87 1588.35 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
98. cfl1l ENSDARG00000012972 208.91 1566.16 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
99. pabpc1a ENSDARG00000017219 208.91 1566.16 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
100. RPL29 ENSDARG00000077717 204.46 1532.80 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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