Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s25.

Sample reads: 133,424. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15091.64 113110.45
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2928.99 21952.51 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1608.79 12057.73 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-co2 ENSDARG00000063908 1487.52 11148.83 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1479.84 11091.26 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. si:dkey-151g10.6 si:dkey-151g10.6 1226.55 9192.88
7. mt-atp6 ENSDARG00000063911 1197.38 8974.25 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. actc1b ENSDARG00000099197 1148.26 8606.10 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. mt-nd4 ENSDARG00000063917 1126.77 8445.04 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. mt-co3 ENSDARG00000063912 1033.13 7743.21 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. ckma ENSDARG00000035327, ENSDARG00000114671 1017.78 7628.17 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. ckmb ENSDARG00000040565 974.79 7305.96 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
13. tmsb4x ENSDARG00000077777 971.72 7282.95 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
14. mt-nd1 ENSDARG00000063895 798.26 5982.89 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
15. eef1a1l1 ENSDARG00000020850 785.98 5890.85 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. atp2a1 ENSDARG00000020574 716.90 5373.10 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
17. ppiaa ENSDARG00000009212 684.66 5131.46 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. actb2 ENSDARG00000037870 678.52 5085.44 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. tnnc2 ENSDARG00000070835, ENSDARG00000111155 666.24 4993.41 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
20. apoc1l apoc1l 623.25 4671.20
21. apoeb ENSDARG00000040295 617.11 4625.18 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
22. apoa1b ENSDARG00000101324 601.76 4510.14 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 594.09 4452.65 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. mylz3 ENSDARG00000017441 592.55 4441.11 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
25. zgc:161979_1 zgc:161979_1 592.55 4441.11
26. rpl23 ENSDARG00000053457 584.88 4383.62 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. zgc:161979 zgc:161979 584.88 4383.62
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 563.38 4222.48 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. zgc:112425 zgc:112425 537.29 4026.94
30. rps26l ENSDARG00000030408 500.45 3750.83 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
31. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 488.16 3658.71 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
32. apoa2 ENSDARG00000015866 463.60 3474.64 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
33. apobb apobb 460.53 3451.63
34. hmga1a ENSDARG00000028335 442.11 3313.57 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
35. mt-cyb ENSDARG00000063924 439.04 3290.56 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
36. rpl18a ENSDARG00000025073 435.97 3267.56 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
37. rpl8 ENSDARG00000014867 420.62 3152.51 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
38. eef2b ENSDARG00000100371, ENSDARG00000109247 416.01 3117.96 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
39. rpl21 ENSDARG00000010516, ENSDARG00000110263 402.20 3014.45 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
40. btf3 ENSDARG00000035400, ENSDARG00000116462 386.85 2899.41 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
41. acta1a ENSDARG00000036371 380.71 2853.39 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
42. myl10 ENSDARG00000062592 380.71 2853.39 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
43. rps23 ENSDARG00000021838 380.71 2853.39 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
44. zgc:66286 zgc:66286 377.64 2830.38
45. rps20 ENSDARG00000036044 374.57 2807.37 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
46. rpl26 ENSDARG00000102317 371.50 2784.36 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
47. rps14 ENSDARG00000036629 362.29 2715.33 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
48. myhz1.3 ENSDARG00000067997 360.75 2703.79 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
49. actb1 ENSDARG00000037746, ENSDARG00000113649 359.22 2692.32 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
50. rplp1 ENSDARG00000021864 356.14 2669.24 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
51. rps29 ENSDARG00000041232 350.00 2623.22 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
52. rpl36a ENSDARG00000058105, ENSDARG00000112656 348.47 2611.75 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
53. rpl36 ENSDARG00000100588 333.12 2496.70 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
54. rpl9 ENSDARG00000037350, ENSDARG00000112384 333.12 2496.70 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
55. rps15a ENSDARG00000010160 326.98 2450.69 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
56. zgc:153129 zgc:153129 326.98 2450.69
57. hsp90aa1.1 ENSDARG00000010478 325.44 2439.14 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
58. rpl19 ENSDARG00000013307 325.44 2439.14 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
59. apoa1a ENSDARG00000012076, ENSDARG00000110395 314.70 2358.65 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
60. acta1b ENSDARG00000055618 310.09 2324.10 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
61. rps15 ENSDARG00000070849, ENSDARG00000110979 302.42 2266.61 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 285.53 2140.02 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. rps6 ENSDARG00000019778 285.53 2140.02 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
64. rps12 ENSDARG00000036875, ENSDARG00000115157 283.99 2128.48 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
65. RPL29 ENSDARG00000077717 274.78 2059.45 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
66. rpl11 ENSDARG00000043509 274.78 2059.45 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
67. rpl27 ENSDARG00000015128 274.78 2059.45 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
68. rps3 ENSDARG00000103007 267.11 2001.96 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
69. fabp3 ENSDARG00000023290 265.57 1990.42 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
70. rpl39 ENSDARG00000036316, ENSDARG00000117167 264.04 1978.96 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
71. rps2 ENSDARG00000077291 264.04 1978.96 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. rpl5b ENSDARG00000015862, ENSDARG00000109661 257.90 1932.94 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
73. rps10 ENSDARG00000034897 257.90 1932.94 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
74. rplp0 ENSDARG00000051783 251.76 1886.92 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. si:dkey-150i13.2 ENSDARG00000071052 251.76 1886.92 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
76. ttna ttna 248.69 1863.91
77. rps9 ENSDARG00000011405, ENSDARG00000113248 242.55 1817.89 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
78. myhz2 ENSDARG00000012944 239.48 1794.88 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
79. rps24 ENSDARG00000039347 237.94 1783.34 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
80. eif5a ENSDARG00000017235 236.41 1771.87 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
81. rpl15 ENSDARG00000009285 236.41 1771.87 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
82. myl1 ENSDARG00000014196 234.87 1760.33 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
83. aldoab ENSDARG00000034470 233.34 1748.86 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
84. fabp2 ENSDARG00000006427, ENSDARG00000110230 233.34 1748.86 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
85. rps5 ENSDARG00000043453 230.27 1725.85 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
86. tnnt2c ENSDARG00000032242 230.27 1725.85 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
87. ctsla ENSDARG00000007836 227.20 1702.84 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
88. id1 ENSDARG00000040764 227.20 1702.84 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
89. rpl6 ENSDARG00000058451 227.20 1702.84 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
90. rpsa ENSDARG00000019181 227.20 1702.84 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
91. rpl18 ENSDARG00000029533 225.66 1691.30 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
92. rps19 ENSDARG00000030602 221.06 1656.82 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
93. tpm3 ENSDARG00000005162 221.06 1656.82 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
94. tnnt3a ENSDARG00000030270 217.99 1633.81 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
95. tnni2b.1 ENSDARG00000035958 214.92 1610.81 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
96. atp5g3b 207.24 1553.24 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
97. faua ENSDARG00000099022 202.63 1518.69 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. ATP5B 196.49 1472.67 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
99. rpl23a ENSDARG00000006316 194.96 1461.21 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
100. rps4x ENSDARG00000014690 194.96 1461.21 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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