Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s24.

Sample reads: 133,414. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 20339.76 152456.48
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3101.31 23245.84 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1475.86 11062.29 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tpma ENSDARG00000033683 1460.03 10943.64 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. mt-nd4 ENSDARG00000063917 1057.26 7924.68 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. mt-co2 ENSDARG00000063908 1008.36 7558.15 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. si:dkey-151g10.6 si:dkey-151g10.6 991.10 7428.78
8. mt-atp6 ENSDARG00000063911 970.96 7277.82 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. ckma ENSDARG00000035327, ENSDARG00000114671 936.43 7019.00 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
10. actc1b ENSDARG00000099197 893.28 6695.57 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
11. ckmb ENSDARG00000040565 855.88 6415.24 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
12. mt-co3 ENSDARG00000063912 848.69 6361.35 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. tmsb4x ENSDARG00000077777 819.92 6145.70 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
14. actb2 ENSDARG00000037870 798.34 5983.95 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. atp2a1 ENSDARG00000020574 687.58 5153.75 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. eef1a1l1 ENSDARG00000020850 670.32 5024.38 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. ppiaa ENSDARG00000009212 641.55 4808.73 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. mt-nd1 ENSDARG00000063895 607.03 4549.99 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. eef2b ENSDARG00000100371, ENSDARG00000109247 599.84 4496.10 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
20. zgc:161979_1 zgc:161979_1 578.26 4334.34
21. apoa1b ENSDARG00000101324 513.53 3849.16 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
22. zgc:112425 zgc:112425 510.65 3827.57
23. hspa8 ENSDARG00000068992, ENSDARG00000114726 507.77 3805.99 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
24. apoc1l apoc1l 497.71 3730.58
25. mylz3 ENSDARG00000017441 480.44 3601.13 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
26. apoeb ENSDARG00000040295 477.57 3579.62 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
27. AC024175.17 AC024175.17 471.81 3536.45
28. tnnc2 ENSDARG00000070835, ENSDARG00000111155 466.06 3493.35 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
29. apoa2 ENSDARG00000015866 447.36 3353.18 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
30. actb1 ENSDARG00000037746, ENSDARG00000113649 431.54 3234.60 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
31. hmga1a ENSDARG00000028335 421.47 3159.12 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
32. zgc:161979 zgc:161979 415.71 3115.95
33. rpl18a ENSDARG00000025073 414.28 3105.23 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
34. apobb apobb 408.52 3062.06
35. acta1a ENSDARG00000036371 395.58 2965.07 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
36. rpl10a ENSDARG00000042905, ENSDARG00000115649 392.70 2943.48 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
37. rpl23 ENSDARG00000053457 379.75 2846.41 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 378.31 2835.62 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. myhz1.3 ENSDARG00000067997 374.00 2803.31 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
40. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 371.12 2781.73 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
41. mt-cyb ENSDARG00000063924 365.37 2738.63 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
42. ttna ttna 362.49 2717.04
43. zgc:66286 zgc:66286 361.05 2706.25
44. fabp3 ENSDARG00000023290 358.18 2684.73 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
45. si:dkey-150i13.2 ENSDARG00000071052 355.30 2663.15 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
46. hsp90aa1.1 ENSDARG00000010478 348.11 2609.26 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
47. rpl26 ENSDARG00000102317 333.72 2501.40 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. rpl8 ENSDARG00000014867 329.41 2469.09 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
49. rps14 ENSDARG00000036629 323.65 2425.92 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
50. myl10 ENSDARG00000062592 319.34 2393.61 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
51. acta1b ENSDARG00000055618 315.02 2361.23 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
52. rpl36a ENSDARG00000058105, ENSDARG00000112656 310.71 2328.92 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
53. zgc:153129 zgc:153129 303.51 2274.96
54. rps23 ENSDARG00000021838 300.64 2253.44 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
55. rpl21 ENSDARG00000010516, ENSDARG00000110263 297.76 2231.86 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
56. ttnb ttnb 289.13 2167.17
57. rpl19 ENSDARG00000013307 276.18 2070.10 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
58. myhz2 ENSDARG00000012944 274.75 2059.39 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
59. rps26l ENSDARG00000030408 274.75 2059.39 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
60. eif5a ENSDARG00000017235 270.43 2027.01 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
61. pabpc1a ENSDARG00000017219 263.24 1973.11 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
62. rpl15 ENSDARG00000009285 261.80 1962.32 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
63. tnni2b.1 ENSDARG00000035958 260.36 1951.53 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
64. rpl11 ENSDARG00000043509 254.61 1908.43 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
65. rpl36 ENSDARG00000100588 245.98 1843.74 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
66. ptmab ENSDARG00000101766 238.78 1789.77 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
67. apoa1a ENSDARG00000012076, ENSDARG00000110395 227.28 1703.58 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
68. tpm3 ENSDARG00000005162 225.84 1692.78 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
69. rps20 ENSDARG00000036044 221.52 1660.40 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
70. tnnt2c ENSDARG00000032242 221.52 1660.40 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
71. rps29 ENSDARG00000041232 220.08 1649.61 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
72. rps6 ENSDARG00000019778 218.65 1638.89 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
73. rplp1 ENSDARG00000021864 217.21 1628.10 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
74. rplp0 ENSDARG00000051783 214.33 1606.51 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. myl1 ENSDARG00000014196 212.89 1595.71 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
76. rpl9 ENSDARG00000037350, ENSDARG00000112384 212.89 1595.71 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
77. rps27a ENSDARG00000032725, ENSDARG00000114059 210.01 1574.13 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
78. rps19 ENSDARG00000030602 207.14 1552.62 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
79. rps15 ENSDARG00000070849, ENSDARG00000110979 204.26 1531.03 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
80. rpl27 ENSDARG00000015128 201.38 1509.44 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
81. atp5g3b 199.95 1498.72 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
82. aldoab ENSDARG00000034470 198.51 1487.93 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
83. rps9 ENSDARG00000011405, ENSDARG00000113248 198.51 1487.93 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
84. si:dkeyp-86f7.3 si:dkeyp-86f7.3 198.51 1487.93
85. tnnt3a ENSDARG00000030270 197.07 1477.14 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
86. rpl7 ENSDARG00000007320 194.19 1455.55 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
87. rps2 ENSDARG00000077291 192.75 1444.76 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
88. cfl1l ENSDARG00000012972 191.31 1433.96 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
89. rps10 ENSDARG00000034897 189.88 1423.24 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
90. rps3 ENSDARG00000103007 189.88 1423.24 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
91. si:ch1073-429i10.3 188.44 1412.45 si:ch1073-429i10.3, transcript variant X2
92. rpl5b ENSDARG00000015862, ENSDARG00000109661 187.00 1401.66 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
93. rpl18 ENSDARG00000029533 185.56 1390.86 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
94. krt8 ENSDARG00000058358, ENSDARG00000109279 184.12 1380.07 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
95. id1 ENSDARG00000040764 182.68 1369.28 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
96. ATP5B 176.93 1326.18 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
97. rps4x ENSDARG00000014690 176.93 1326.18 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
98. mt-co1 ENSDARG00000063905 175.49 1315.38 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
99. rpl14 ENSDARG00000103433 172.61 1293.80 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
100. rps24 ENSDARG00000039347 172.61 1293.80 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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