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Experiment Zebrafish_28hpf_whole3_PA, section s23.

Sample reads: 133,390. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19394.51 145396.53
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3594.43 26946.68 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 1408.16 10556.68 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. mt-nd2 ENSDARG00000063899 1335.92 10015.11 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co3 ENSDARG00000063912 1101.42 8257.11 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
6. mt-nd4 ENSDARG00000063917 1099.05 8239.34 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. si:dkey-151g10.6 si:dkey-151g10.6 1043.39 7822.07
8. mt-co2 ENSDARG00000063908 924.96 6934.23 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. ckma ENSDARG00000035327, ENSDARG00000114671 887.06 6650.10 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
10. mt-atp6 ENSDARG00000063911 871.66 6534.65 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. actc1b ENSDARG00000099197 843.24 6321.59 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
12. ckmb ENSDARG00000040565 808.89 6064.08 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
13. actb2 ENSDARG00000037870 782.84 5868.79 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. tmsb4x ENSDARG00000077777 762.71 5717.88 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
15. eef1a1l1 ENSDARG00000020850 723.62 5424.83 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. atp2a1 ENSDARG00000020574 641.90 4812.19 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
17. zgc:112425 zgc:112425 611.11 4581.36
18. ppiaa ENSDARG00000009212 601.64 4510.37 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
19. eef2b ENSDARG00000100371, ENSDARG00000109247 559.00 4190.70 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
20. apoc1l apoc1l 537.68 4030.87
21. hspa8 ENSDARG00000068992, ENSDARG00000114726 524.66 3933.26 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
22. mt-nd1 ENSDARG00000063895 519.92 3897.73 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
23. zgc:161979_1 zgc:161979_1 503.34 3773.43
24. apoeb ENSDARG00000040295 495.05 3711.28 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
25. acta1a ENSDARG00000036371 476.10 3569.22 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
26. hmga1a ENSDARG00000028335 472.55 3542.61 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
27. apoa1b ENSDARG00000101324 464.26 3480.46 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
28. rpl10a ENSDARG00000042905, ENSDARG00000115649 455.97 3418.31 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
29. zgc:66286 zgc:66286 446.49 3347.24
30. tnnc2 ENSDARG00000070835, ENSDARG00000111155 442.94 3320.63 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
31. apoa2 ENSDARG00000015866 438.20 3285.09 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
32. zgc:161979 zgc:161979 437.02 3276.25
33. rpl23 ENSDARG00000053457 434.65 3258.48 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
34. actb1 ENSDARG00000037746, ENSDARG00000113649 396.75 2974.35 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
35. mylz3 ENSDARG00000017441 394.38 2956.58 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
36. mt-cyb ENSDARG00000063924 393.20 2947.74 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. apobb apobb 382.54 2867.82
38. rpl18a ENSDARG00000025073 374.25 2805.67 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
39. rpl8 ENSDARG00000014867 368.33 2761.29 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
40. btf3 ENSDARG00000035400, ENSDARG00000116462 363.59 2725.76 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
41. rpl19 ENSDARG00000013307 350.56 2628.07 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
42. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 349.38 2619.23 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
43. rpl26 ENSDARG00000102317 347.01 2601.46 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
44. hsp90aa1.1 ENSDARG00000010478 342.27 2565.93 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
45. rpl9 ENSDARG00000037350, ENSDARG00000112384 326.87 2450.48 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
46. zgc:153129 zgc:153129 326.87 2450.48
47. rps23 ENSDARG00000021838 325.69 2441.63 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
48. si:dkey-150i13.2 ENSDARG00000071052 319.77 2397.25 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
49. myhz1.3 ENSDARG00000067997 309.11 2317.33 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
50. rpl21 ENSDARG00000010516, ENSDARG00000110263 304.37 2281.80 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
51. rps26l ENSDARG00000030408 304.37 2281.80 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
52. rps14 ENSDARG00000036629 303.19 2272.95 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
53. ttna ttna 300.82 2255.18
54. myl10 ENSDARG00000062592 294.90 2210.80 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
55. rpl36a ENSDARG00000058105, ENSDARG00000112656 291.34 2184.11 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
56. acta1b ENSDARG00000055618 285.42 2139.73 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
57. pabpc1a ENSDARG00000017219 274.76 2059.82 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
58. rpl27 ENSDARG00000015128 270.03 2024.36 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
59. myhz2 ENSDARG00000012944 267.66 2006.59 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
60. eif5a ENSDARG00000017235 266.47 1997.67 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
61. fabp3 ENSDARG00000023290 253.45 1900.06 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 252.26 1891.14 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. ptmab ENSDARG00000101766 249.89 1873.37 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
64. rps2 ENSDARG00000077291 243.97 1828.99 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
65. rpl11 ENSDARG00000043509 241.60 1811.22 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
66. apoa1a ENSDARG00000012076, ENSDARG00000110395 239.23 1793.46 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
67. myl1 ENSDARG00000014196 238.05 1784.61 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
68. tnnt2c ENSDARG00000032242 229.76 1722.46 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
69. tnni2b.1 ENSDARG00000035958 228.57 1713.54 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
70. rpl18 ENSDARG00000029533 227.39 1704.69 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
71. rplp1 ENSDARG00000021864 226.21 1695.85 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
72. rps29 ENSDARG00000041232 226.21 1695.85 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
73. rps9 ENSDARG00000011405, ENSDARG00000113248 225.02 1686.93 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
74. tpm3 ENSDARG00000005162 223.84 1678.08 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
75. rps20 ENSDARG00000036044 221.47 1660.31 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
76. id1 ENSDARG00000040764 217.92 1633.70 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
77. aldoab ENSDARG00000034470 215.55 1615.93 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
78. rps15a ENSDARG00000010160 215.55 1615.93 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
79. si:dkeyp-86f7.3 si:dkeyp-86f7.3 215.55 1615.93
80. fabp2 ENSDARG00000006427, ENSDARG00000110230 214.36 1607.01 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
81. tnnt3a ENSDARG00000030270 214.36 1607.01 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
82. rpl15 ENSDARG00000009285 209.63 1571.55 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
83. rps10 ENSDARG00000034897 208.44 1562.63 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
84. rps15 ENSDARG00000070849, ENSDARG00000110979 204.89 1536.02 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
85. rps5 ENSDARG00000043453 204.89 1536.02 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
86. ttnb ttnb 204.89 1536.02
87. rps6 ENSDARG00000019778 203.70 1527.10 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
88. rpl36 ENSDARG00000100588 202.52 1518.25 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
89. rplp0 ENSDARG00000051783 198.97 1491.64 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
90. rpl5b ENSDARG00000015862, ENSDARG00000109661 195.41 1464.95 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
91. atp5g3b 194.23 1456.10 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
92. rps12 ENSDARG00000036875, ENSDARG00000115157 194.23 1456.10 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
93. rps3 ENSDARG00000103007 194.23 1456.10 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
94. rpl7 ENSDARG00000007320 190.68 1429.49 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
95. rps4x ENSDARG00000014690 190.68 1429.49 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
96. ATP5B 188.31 1411.72 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
97. faua ENSDARG00000099022 188.31 1411.72 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. cfl1l ENSDARG00000012972 187.12 1402.80 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
99. AL954137.2 ENSDARG00000114408 182.39 1367.34
100. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 181.20 1358.42 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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