Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s10.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 26302.95 197160.04
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4244.22 31813.56 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. si:dkey-151g10.6 si:dkey-151g10.6 1468.81 11009.82
4. mt-co2 ENSDARG00000063908 1268.25 9506.47 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. tmsb4x ENSDARG00000077777 964.46 7229.34 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. actb2 ENSDARG00000037870 905.47 6787.17 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. mt-nd2 ENSDARG00000063899 905.47 6787.17 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. ppiaa ENSDARG00000009212 793.39 5947.04 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
9. eef1a1l1 ENSDARG00000020850 775.70 5814.44 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. mt-co3 ENSDARG00000063912 719.66 5394.38 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. mt-nd4 ENSDARG00000063917 684.27 5129.11 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. rpl10a ENSDARG00000042905, ENSDARG00000115649 678.37 5084.88 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
13. hspa8 ENSDARG00000068992, ENSDARG00000114726 619.38 4642.71 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
14. id1 ENSDARG00000040764 569.24 4266.87 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
15. actb1 ENSDARG00000037746, ENSDARG00000113649 566.29 4244.76 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. zgc:112425 zgc:112425 548.59 4112.09
17. efemp2a ENSDARG00000094324 533.85 4001.60 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
18. eef2b ENSDARG00000100371, ENSDARG00000109247 513.20 3846.81 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
19. rpl21 ENSDARG00000010516, ENSDARG00000110263 492.55 3692.03 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
20. rps26l ENSDARG00000030408 486.65 3647.80 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
21. zgc:66286 zgc:66286 477.81 3581.54
22. mt-atp6 ENSDARG00000063911 474.86 3559.43 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
23. hmga1a ENSDARG00000028335 460.11 3448.86 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
24. rpl8 ENSDARG00000014867 439.46 3294.08 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
25. rpl23 ENSDARG00000053457 433.57 3249.93 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
26. myl10 ENSDARG00000062592 427.67 3205.70 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
27. rpl36a ENSDARG00000058105, ENSDARG00000112656 427.67 3205.70 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
28. rpl18a ENSDARG00000025073 424.72 3183.59 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
29. rpl9 ENSDARG00000037350, ENSDARG00000112384 421.77 3161.48 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
30. acta1a ENSDARG00000036371 415.87 3117.25 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
31. rpl26 ENSDARG00000102317 415.87 3117.25 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
32. rps14 ENSDARG00000036629 412.92 3095.14 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
33. mt-nd1 ENSDARG00000063895 409.97 3073.03 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
34. rps29 ENSDARG00000041232 398.17 2984.58 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
35. rpl11 ENSDARG00000043509 395.22 2962.47 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
36. rpl19 ENSDARG00000013307 395.22 2962.47 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
37. btf3 ENSDARG00000035400, ENSDARG00000116462 389.32 2918.24 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
38. rplp1 ENSDARG00000021864 374.58 2807.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
39. rps23 ENSDARG00000021838 371.63 2785.64 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
40. rpl27 ENSDARG00000015128 345.08 2586.63 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
41. rps27a ENSDARG00000032725, ENSDARG00000114059 342.13 2564.52 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
42. rps9 ENSDARG00000011405, ENSDARG00000113248 330.34 2476.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
43. mt-cyb ENSDARG00000063924 324.44 2431.92 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
44. rps15a ENSDARG00000010160 318.54 2387.69 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
45. rpl36 ENSDARG00000100588 315.59 2365.58 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
46. eif5a ENSDARG00000017235 312.64 2343.47 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
47. ptmab ENSDARG00000101766 309.69 2321.36 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
48. rps15 ENSDARG00000070849, ENSDARG00000110979 297.89 2232.91 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
49. rpl15 ENSDARG00000009285 291.99 2188.68 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
50. rplp0 ENSDARG00000051783 291.99 2188.68 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
51. si:dkey-150i13.2 ENSDARG00000071052 291.99 2188.68 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
52. RPL29 ENSDARG00000077717 289.04 2166.57 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
53. hsp90aa1.1 ENSDARG00000010478 286.09 2144.46 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
54. rps12 ENSDARG00000036875, ENSDARG00000115157 286.09 2144.46 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
55. rpl5b ENSDARG00000015862, ENSDARG00000109661 283.14 2122.34 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
56. pabpc1a ENSDARG00000017219 277.25 2078.19 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
57. rpl18 ENSDARG00000029533 277.25 2078.19 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
58. actc1b ENSDARG00000099197 274.30 2056.08 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
59. rps19 ENSDARG00000030602 271.35 2033.97 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
60. rps20 ENSDARG00000036044 271.35 2033.97 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
61. cfl1l ENSDARG00000012972 265.45 1989.74 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
62. rps10 ENSDARG00000034897 262.50 1967.63 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
63. rps6 ENSDARG00000019778 262.50 1967.63 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
64. fabp3 ENSDARG00000023290 253.65 1901.29 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
65. hsp90ab1 ENSDARG00000029150 253.65 1901.29 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
66. rpl7 ENSDARG00000007320 247.75 1857.07 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
67. si:ch1073-429i10.3 244.80 1834.96 si:ch1073-429i10.3, transcript variant X2
68. rpsa ENSDARG00000019181 241.85 1812.84 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
69. tpma ENSDARG00000033683 241.85 1812.84 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
70. rps2 ENSDARG00000077291 235.95 1768.62 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
71. rpl6 ENSDARG00000058451 224.16 1680.24 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
72. rplp2l ENSDARG00000011201 221.21 1658.13 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
73. rps13 ENSDARG00000036298, ENSDARG00000112818 221.21 1658.13 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
74. rpl14 ENSDARG00000103433 215.31 1613.91 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
75. rps5 ENSDARG00000043453 215.31 1613.91 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
76. AC024175.17 AC024175.17 209.41 1569.68
77. krt8 ENSDARG00000058358, ENSDARG00000109279 209.41 1569.68 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
78. rps27.1 ENSDARG00000023298 203.51 1525.46 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
79. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 203.51 1525.46 zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
80. AL954137.2 ENSDARG00000114408 200.56 1503.35
81. rpl22 ENSDARG00000070437 200.56 1503.35 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
82. rps4x ENSDARG00000014690 200.56 1503.35 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
83. tnnc2 ENSDARG00000070835, ENSDARG00000111155 200.56 1503.35 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
84. rps24 ENSDARG00000039347 197.61 1481.23 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
85. tpm3 ENSDARG00000005162 197.61 1481.23 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
86. hmgn2 ENSDARG00000099572 194.66 1459.12 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
87. cyt1l ENSDARG00000036832 191.71 1437.01 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
88. rps3 ENSDARG00000103007 191.71 1437.01 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
89. cfl1 ENSDARG00000021124 188.76 1414.90 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
90. cox8a ENSDARG00000095273 188.76 1414.90 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
91. rpl24 ENSDARG00000099104 188.76 1414.90 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
92. rpl39 ENSDARG00000036316, ENSDARG00000117167 188.76 1414.90 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
93. ttna ttna 188.76 1414.90
94. ckma ENSDARG00000035327, ENSDARG00000114671 185.81 1392.78 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
95. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 182.86 1370.67 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
96. rpl38 ENSDARG00000006413 179.91 1348.56 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
97. gnb2l1 176.97 1326.52 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
98. rpl28 ENSDARG00000005791 176.97 1326.52 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
99. rps18 ENSDARG00000100392 176.97 1326.52 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
100. hnrnpab hnrnpab 171.07 1282.30
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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