Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s70.

Sample reads: 133,407. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 4645.55 34827.64 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tmsb4x ENSDARG00000077777 2677.79 20075.36 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
3. AC024175.4 AC024175.4 1785.19 13383.55
4. mt-co2 ENSDARG00000063908 1420.04 10646.02 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. actb1 ENSDARG00000037746, ENSDARG00000113649 1156.32 8668.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
6. si:dkey-151g10.6 si:dkey-151g10.6 1156.32 8668.92
7. zgc:112425 zgc:112425 1054.89 7908.50
8. eef1a1l1 ENSDARG00000020850 1014.31 7604.27 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
9. rpl8 ENSDARG00000014867 892.60 6691.81 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
10. actb2 ENSDARG00000037870 852.02 6387.58 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. rps23 ENSDARG00000021838 852.02 6387.58 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
12. rpl21 ENSDARG00000010516, ENSDARG00000110263 811.45 6083.43 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
13. rpl10a ENSDARG00000042905, ENSDARG00000115649 791.16 5931.32 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
14. rpl26 ENSDARG00000102317 770.88 5779.28 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
15. hmga1a ENSDARG00000028335 750.59 5627.16 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
16. mt-nd2 ENSDARG00000063899 730.31 5475.13 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
17. rpl23 ENSDARG00000053457 730.31 5475.13 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
18. rpl18a ENSDARG00000025073 710.02 5323.01 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
19. mt-co3 ENSDARG00000063912 669.45 5018.86 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. rpl36 ENSDARG00000100588 649.16 4866.75 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
21. RPL29 ENSDARG00000077717 628.87 4714.63 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
22. col1a1a ENSDARG00000012405, ENSDARG00000116113 628.87 4714.63 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
23. mt-nd1 ENSDARG00000063895 608.59 4562.59 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. rpl27 ENSDARG00000015128 608.59 4562.59 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
25. rps27a ENSDARG00000032725, ENSDARG00000114059 608.59 4562.59 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
26. faua ENSDARG00000099022 588.30 4410.48 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
27. hsp90ab1 ENSDARG00000029150 588.30 4410.48 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
28. ppiaa ENSDARG00000009212 588.30 4410.48 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. hbae3 ENSDARG00000079305 568.02 4258.44 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
30. mt-nd4 ENSDARG00000063917 568.02 4258.44 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
31. rps26l ENSDARG00000030408 568.02 4258.44 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
32. eif5a ENSDARG00000017235 527.44 3954.21 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
33. rps20 ENSDARG00000036044 527.44 3954.21 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
34. rpl15 ENSDARG00000009285 507.16 3802.17 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
35. rpl19 ENSDARG00000013307 507.16 3802.17 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
36. rpl36a ENSDARG00000058105, ENSDARG00000112656 507.16 3802.17 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
37. rps13 ENSDARG00000036298, ENSDARG00000112818 507.16 3802.17 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
38. rps19 ENSDARG00000030602 507.16 3802.17 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 486.87 3650.06 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. rpl11 ENSDARG00000043509 486.87 3650.06 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
41. rps3 ENSDARG00000103007 486.87 3650.06 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
42. rps9 ENSDARG00000011405, ENSDARG00000113248 486.87 3650.06 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
43. efemp2a ENSDARG00000094324 466.58 3497.94 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
44. mt-atp6 ENSDARG00000063911 446.30 3345.91 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
45. rpl28 ENSDARG00000005791 446.30 3345.91 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
46. rps2 ENSDARG00000077291 446.30 3345.91 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
47. hspa8 ENSDARG00000068992, ENSDARG00000114726 426.01 3193.79 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
48. rpl9 ENSDARG00000037350, ENSDARG00000112384 426.01 3193.79 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
49. rps6 ENSDARG00000019778 426.01 3193.79 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
50. si:ch1073-429i10.3 426.01 3193.79 si:ch1073-429i10.3, transcript variant X2
51. cirbp cirbp 405.73 3041.75
52. h3f3a 405.73 3041.75 H3 histone, family 3A, transcript variant X1
53. mt-cyb ENSDARG00000063924 405.73 3041.75 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
54. rpl18 ENSDARG00000029533 405.73 3041.75 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
55. rpl31 ENSDARG00000053365 405.73 3041.75 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
56. rpl39 ENSDARG00000036316, ENSDARG00000117167 405.73 3041.75 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
57. rps12 ENSDARG00000036875, ENSDARG00000115157 405.73 3041.75 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
58. cfl1l ENSDARG00000012972 385.44 2889.64 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
59. hmgn2 ENSDARG00000099572 385.44 2889.64 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
60. rps14 ENSDARG00000036629 385.44 2889.64 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
61. rps29 ENSDARG00000041232 385.44 2889.64 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
62. rps4x ENSDARG00000014690 385.44 2889.64 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
63. eef2b ENSDARG00000100371, ENSDARG00000109247 365.15 2737.53 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
64. rplp0 ENSDARG00000051783 365.15 2737.53 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
65. rps5 ENSDARG00000043453 365.15 2737.53 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
66. zgc:66286 zgc:66286 365.15 2737.53
67. apoc1l apoc1l 344.87 2585.49
68. hbbe3 ENSDARG00000038147, ENSDARG00000109344 344.87 2585.49 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
69. ptmab ENSDARG00000101766 344.87 2585.49 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
70. rpl23a ENSDARG00000006316 344.87 2585.49 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
71. rplp2l ENSDARG00000011201 344.87 2585.49 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
72. rps24 ENSDARG00000039347 344.87 2585.49 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
73. zgc:92533 zgc:92533 324.58 2433.37
74. cyt1l ENSDARG00000036832 304.29 2281.26 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
75. fkbp1aa ENSDARG00000022684 304.29 2281.26 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
76. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 304.29 2281.26 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
77. rpl22 ENSDARG00000070437 304.29 2281.26 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
78. rpl30 ENSDARG00000035871, ENSDARG00000109253 304.29 2281.26 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
79. rpl7 ENSDARG00000007320 304.29 2281.26 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
80. rps15 ENSDARG00000070849, ENSDARG00000110979 304.29 2281.26 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
81. AL954137.2 ENSDARG00000114408 284.01 2129.22
82. RPL37A RPL37A 284.01 2129.22
83. id1 ENSDARG00000040764 284.01 2129.22 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
84. khdrbs1a ENSDARG00000052856 284.01 2129.22 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
85. rpl14 ENSDARG00000103433 284.01 2129.22 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
86. rplp1 ENSDARG00000021864 284.01 2129.22 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
87. rps15a ENSDARG00000010160 284.01 2129.22 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
88. rps7 ENSDARG00000042566 284.01 2129.22 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
89. si:dkeyp-86f7.3 si:dkeyp-86f7.3 284.01 2129.22
90. eef1g ENSDARG00000056119 263.72 1977.11 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
91. h1f0 ENSDARG00000038559 263.72 1977.11 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
92. rpl35 ENSDARG00000018334 263.72 1977.11 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
93. capns1b ENSDARG00000013804 243.44 1825.07 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
94. hbbe1.1 ENSDARG00000113599 243.44 1825.07 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
95. krt8 ENSDARG00000058358, ENSDARG00000109279 243.44 1825.07 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
96. pcna ENSDARG00000054155 243.44 1825.07 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
97. rpl5b ENSDARG00000015862, ENSDARG00000109661 243.44 1825.07 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
98. rplp2 ENSDARG00000101406 243.44 1825.07 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
99. rps16 ENSDARG00000045487 243.44 1825.07 ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
100. rps18 ENSDARG00000100392 243.44 1825.07 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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