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Experiment Zebrafish_28hpf_whole2, section s68.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5100.31 38232.91 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 3710.01 27810.95
3. tmsb4x ENSDARG00000077777 1947.19 14596.51 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 1431.98 10734.40 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. eef1a1l1 ENSDARG00000020850 1147.85 8604.51 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
6. actb2 ENSDARG00000037870 1093.56 8197.54 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. actb1 ENSDARG00000037746, ENSDARG00000113649 997.59 7478.13 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
8. hmga1a ENSDARG00000028335 991.27 7430.75 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
9. zgc:112425 zgc:112425 976.12 7317.18
10. ppiaa ENSDARG00000009212 849.84 6370.57 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. mt-co3 ENSDARG00000063912 833.43 6247.55 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd4 ENSDARG00000063917 774.08 5802.65 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mt-atp6 ENSDARG00000063911 771.55 5783.69 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. mt-nd2 ENSDARG00000063899 742.51 5566.00 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
15. si:dkey-151g10.6 si:dkey-151g10.6 715.99 5367.20
16. rpl10a ENSDARG00000042905, ENSDARG00000115649 670.53 5026.42 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
17. ptmab ENSDARG00000101766 614.97 4609.93 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
18. rpl23 ENSDARG00000053457 588.45 4411.14 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. rpl8 ENSDARG00000014867 537.94 4032.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
20. eef2b ENSDARG00000100371, ENSDARG00000109247 503.84 3776.88 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
21. col1a1a ENSDARG00000012405, ENSDARG00000116113 491.22 3682.28 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
22. id1 ENSDARG00000040764 463.44 3474.04 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
23. rpl26 ENSDARG00000102317 463.44 3474.04 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
24. efemp2a ENSDARG00000094324 447.02 3350.95 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
25. rps27a ENSDARG00000032725, ENSDARG00000114059 441.97 3313.09 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
26. rpl18a ENSDARG00000025073 439.44 3294.13 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
27. hspa8 ENSDARG00000068992, ENSDARG00000114726 438.18 3284.68 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
28. mt-cyb ENSDARG00000063924 436.92 3275.24 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
29. mt-nd1 ENSDARG00000063895 435.65 3265.72 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
30. rps23 ENSDARG00000021838 433.13 3246.83 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
31. rpl9 ENSDARG00000037350, ENSDARG00000112384 416.71 3123.74 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
32. cfl1l ENSDARG00000012972 409.14 3066.99 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
33. cyt1l ENSDARG00000036832 400.30 3000.73 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
34. rpl21 ENSDARG00000010516, ENSDARG00000110263 397.77 2981.76 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
35. zgc:66286 zgc:66286 396.51 2972.32
36. zgc:92533 zgc:92533 391.46 2934.46
37. rplp1 ENSDARG00000021864 390.19 2924.94 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
38. rpl36a ENSDARG00000058105, ENSDARG00000112656 383.88 2877.64 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 372.52 2792.48 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. hsp90ab1 ENSDARG00000029150 368.73 2764.07 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
41. rpl36 ENSDARG00000100588 357.36 2678.84 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
42. rpl19 ENSDARG00000013307 356.10 2669.39 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
43. rps2 ENSDARG00000077291 356.10 2669.39 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
44. rps26l ENSDARG00000030408 356.10 2669.39 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
45. rps5 ENSDARG00000043453 354.84 2659.95 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
46. rps20 ENSDARG00000036044 349.79 2622.09 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
47. rps15 ENSDARG00000070849, ENSDARG00000110979 342.21 2565.27 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
48. rpl27 ENSDARG00000015128 337.16 2527.42 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
49. hmgn2 ENSDARG00000099572 335.90 2517.97 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
50. myl10 ENSDARG00000062592 328.32 2461.15 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
51. cirbp cirbp 320.74 2404.33
52. eif5a ENSDARG00000017235 319.48 2394.88 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. rpl7 ENSDARG00000007320 305.59 2290.76 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
54. rps29 ENSDARG00000041232 299.28 2243.46 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
55. rps15a ENSDARG00000010160 292.96 2196.08 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
56. h3f3a 291.70 2186.64 H3 histone, family 3A, transcript variant X1
57. rps12 ENSDARG00000036875, ENSDARG00000115157 291.70 2186.64 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
58. AL954137.2 ENSDARG00000114408 285.39 2139.34
59. si:ch1073-429i10.3 282.86 2120.37 si:ch1073-429i10.3, transcript variant X2
60. rpl5b ENSDARG00000015862, ENSDARG00000109661 280.33 2101.41 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
61. acta1a ENSDARG00000036371 279.07 2091.96 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
62. rps14 ENSDARG00000036629 272.76 2044.66 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
63. rps9 ENSDARG00000011405, ENSDARG00000113248 271.49 2035.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
64. krt8 ENSDARG00000058358, ENSDARG00000109279 270.23 2025.70 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
65. rpl6 ENSDARG00000058451 270.23 2025.70 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
66. si:dkeyp-86f7.3 si:dkeyp-86f7.3 270.23 2025.70
67. RPL29 ENSDARG00000077717 266.44 1997.29 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
68. rpl18 ENSDARG00000029533 265.18 1987.84 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
69. pcna ENSDARG00000054155 262.66 1968.95 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
70. rplp2l ENSDARG00000011201 260.13 1949.98 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
71. rpl11 ENSDARG00000043509 256.34 1921.57 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 255.08 1912.13 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
73. fabp3 ENSDARG00000023290 253.82 1902.68 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
74. mt-co1 ENSDARG00000063905 250.03 1874.27 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
75. rpsa ENSDARG00000019181 243.71 1826.90 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
76. rps6 ENSDARG00000019778 236.14 1770.15 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
77. rps24 ENSDARG00000039347 233.61 1751.19 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
78. rps27.1 ENSDARG00000023298 233.61 1751.19 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
79. pfn1 ENSDARG00000088091 232.35 1741.74 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
80. tpm3 ENSDARG00000005162 231.09 1732.30 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
81. fkbp1aa ENSDARG00000022684 229.82 1722.78 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
82. rpl14 ENSDARG00000103433 228.56 1713.33 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
83. zgc:123194 zgc:123194 224.77 1684.92
84. rpl15 ENSDARG00000009285 223.51 1675.47 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
85. cfl1 ENSDARG00000021124 220.98 1656.51 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
86. rpl39 ENSDARG00000036316, ENSDARG00000117167 215.93 1618.65 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
87. rps19 ENSDARG00000030602 215.93 1618.65 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
88. rps7 ENSDARG00000042566 213.41 1599.76 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
89. pabpc1a ENSDARG00000017219 210.88 1580.80 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
90. rpl31 ENSDARG00000053365 210.88 1580.80 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
91. rps4x ENSDARG00000014690 210.88 1580.80 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
92. khdrbs1a ENSDARG00000052856 208.36 1561.91 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
93. rpl28 ENSDARG00000005791 204.57 1533.50 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
94. tuba8l4 ENSDARG00000006260 203.31 1524.05 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
95. faua ENSDARG00000099022 202.04 1514.53 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
96. hnrnpab hnrnpab 198.25 1486.12
97. ran ENSDARG00000057026 196.99 1476.68 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
98. rps3 ENSDARG00000103007 194.47 1457.78 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
99. rpl35 ENSDARG00000018334 191.94 1438.82 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
100. rpl22 ENSDARG00000070437 189.41 1419.85 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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