Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s67.

Sample reads: 133,399. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 6763.52 50709.66 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 4594.90 34450.38
3. mt-nd2 ENSDARG00000063899 2726.88 20444.85 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. mt-co2 ENSDARG00000063908 1739.19 13039.62 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd4 ENSDARG00000063917 1653.30 12395.66 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. actc1b ENSDARG00000099197 1503.00 11268.78 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
7. mt-atp6 ENSDARG00000063911 1266.82 9498.02 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. mt-co3 ENSDARG00000063912 1266.82 9498.02 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
9. eef1a1l1 ENSDARG00000020850 1223.88 9176.07 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. eef2b ENSDARG00000100371, ENSDARG00000109247 1137.99 8532.11 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
11. mt-nd1 ENSDARG00000063895 1009.16 7566.20 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
12. tpma ENSDARG00000033683 1009.16 7566.20 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 966.22 7244.26 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. rpl8 ENSDARG00000014867 837.39 6278.35 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
15. actb2 ENSDARG00000037870 751.50 5634.39 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. ppiaa ENSDARG00000009212 730.03 5473.42 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
17. tmsb4x ENSDARG00000077777 708.56 5312.45 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
18. hmga1a ENSDARG00000028335 687.09 5151.47 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
19. zgc:66286 zgc:66286 687.09 5151.47
20. rpl18a ENSDARG00000025073 665.62 4990.50 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. ckmb ENSDARG00000040565 644.14 4829.46 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
22. rps26l ENSDARG00000030408 644.14 4829.46 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
23. atp2a1 ENSDARG00000020574 579.73 4346.54 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
24. cyt1l ENSDARG00000036832 579.73 4346.54 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
25. rps27a ENSDARG00000032725, ENSDARG00000114059 536.79 4024.60 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
26. mt-co1 ENSDARG00000063905 493.84 3702.58 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
27. rps3 ENSDARG00000103007 493.84 3702.58 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
28. si:dkey-151g10.6 si:dkey-151g10.6 493.84 3702.58
29. zgc:112425 zgc:112425 472.37 3541.61
30. rpl10a ENSDARG00000042905, ENSDARG00000115649 450.90 3380.63 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
31. zgc:92533 zgc:92533 450.90 3380.63
32. mt-cyb ENSDARG00000063924 429.43 3219.66 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. tnnc2 ENSDARG00000070835, ENSDARG00000111155 429.43 3219.66 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
34. rpl26 ENSDARG00000102317 407.96 3058.69 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
35. rpl36a ENSDARG00000058105, ENSDARG00000112656 407.96 3058.69 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
36. rpl6 ENSDARG00000058451 407.96 3058.69 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
37. ckma ENSDARG00000035327, ENSDARG00000114671 386.49 2897.72 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
38. col1a1a ENSDARG00000012405, ENSDARG00000116113 386.49 2897.72 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
39. rps5 ENSDARG00000043453 365.02 2736.75 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
40. rpl7 ENSDARG00000007320 343.54 2575.70 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
41. rplp1 ENSDARG00000021864 343.54 2575.70 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
42. rps23 ENSDARG00000021838 343.54 2575.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
43. tmem38a ENSDARG00000024047 343.54 2575.70 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
44. uba52 ENSDARG00000041435 343.54 2575.70 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
45. eif5a ENSDARG00000017235 322.07 2414.73 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
46. rpl19 ENSDARG00000013307 322.07 2414.73 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
47. rplp0 ENSDARG00000051783 322.07 2414.73 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
48. rps15 ENSDARG00000070849, ENSDARG00000110979 322.07 2414.73 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
49. rps2 ENSDARG00000077291 322.07 2414.73 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
50. rps4x ENSDARG00000014690 322.07 2414.73 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
51. btf3 ENSDARG00000035400, ENSDARG00000116462 300.60 2253.76 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
52. cfl1l ENSDARG00000012972 300.60 2253.76 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
53. rpl21 ENSDARG00000010516, ENSDARG00000110263 300.60 2253.76 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
54. myl10 ENSDARG00000062592 279.13 2092.78 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
55. rps20 ENSDARG00000036044 279.13 2092.78 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
56. tnni2b.1 ENSDARG00000035958 279.13 2092.78 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
57. acta1a ENSDARG00000036371 257.66 1931.81 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
58. aldoab ENSDARG00000034470 257.66 1931.81 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
59. atp5g3b 257.66 1931.81 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
60. cirbp cirbp 257.66 1931.81
61. krt8 ENSDARG00000058358, ENSDARG00000109279 257.66 1931.81 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
62. rpl36 ENSDARG00000100588 257.66 1931.81 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
63. rpl9 ENSDARG00000037350, ENSDARG00000112384 257.66 1931.81 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
64. rplp2 ENSDARG00000101406 257.66 1931.81 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
65. rps14 ENSDARG00000036629 257.66 1931.81 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
66. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 257.66 1931.81 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
67. rpsa ENSDARG00000019181 257.66 1931.81 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
68. spna2 257.66 1931.81 spectrin alpha 2, transcript variant X12
69. tnnt2c ENSDARG00000032242 257.66 1931.81 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
70. zgc:113413 zgc:113413 257.66 1931.81
71. fth1a ENSDARG00000015551 236.19 1770.84 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
72. marcksb ENSDARG00000008803 236.19 1770.84 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
73. rpl11 ENSDARG00000043509 236.19 1770.84 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
74. rpl18 ENSDARG00000029533 236.19 1770.84 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
75. rpl24 ENSDARG00000099104 236.19 1770.84 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
76. rpl35 ENSDARG00000018334 236.19 1770.84 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
77. vdac2 ENSDARG00000013623 236.19 1770.84 voltage-dependent anion channel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-845]
78. ATP5B 214.71 1609.79 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
79. COX5B_1 ENSDARG00000015978 214.71 1609.79 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
80. faua ENSDARG00000099022 214.71 1609.79 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
81. gnb2l1 214.71 1609.79 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
82. hspa8 ENSDARG00000068992, ENSDARG00000114726 214.71 1609.79 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
83. myhz1.3 ENSDARG00000067997 214.71 1609.79 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
84. myl1 ENSDARG00000014196 214.71 1609.79 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
85. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 214.71 1609.79 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
86. pcna ENSDARG00000054155 214.71 1609.79 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
87. rpl17 ENSDARG00000057556 214.71 1609.79 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
88. rps15a ENSDARG00000010160 214.71 1609.79 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
89. rps18 ENSDARG00000100392 214.71 1609.79 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
90. rps6 ENSDARG00000019778 214.71 1609.79 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
91. si:ch1073-429i10.3 214.71 1609.79 si:ch1073-429i10.3, transcript variant X2
92. atp5a1 193.24 1448.82 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
93. col1a1b ENSDARG00000035809 193.24 1448.82 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
94. hbae3 ENSDARG00000079305 193.24 1448.82 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
95. icn2 ENSDARG00000055514 193.24 1448.82 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
96. myhz2 ENSDARG00000012944 193.24 1448.82 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
97. mylz3 ENSDARG00000017441 193.24 1448.82 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
98. pfn1 ENSDARG00000088091 193.24 1448.82 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
99. rpl22 ENSDARG00000070437 193.24 1448.82 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
100. rpl5a ENSDARG00000020197 193.24 1448.82 ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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