Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s65.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 5849.65 43851.46 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 2608.29 19552.85
3. tmsb4x ENSDARG00000077777 2114.48 15851.04 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. actb1 ENSDARG00000037746, ENSDARG00000113649 1304.14 9776.39 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
5. mt-nd2 ENSDARG00000063899 1177.53 8827.26 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. actb2 ENSDARG00000037870 1088.90 8162.86 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. mt-co2 ENSDARG00000063908 1076.23 8067.88 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. si:dkey-151g10.6 si:dkey-151g10.6 1063.57 7972.97
9. eef1a1l1 ENSDARG00000020850 1012.93 7593.35 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. ppiaa ENSDARG00000009212 974.94 7308.56 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. mt-nd4 ENSDARG00000063917 886.31 6644.16 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. hmga1a ENSDARG00000028335 860.99 6454.35 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
13. rpl10a ENSDARG00000042905, ENSDARG00000115649 823.00 6169.56 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
14. hspa8 ENSDARG00000068992, ENSDARG00000114726 785.02 5884.84 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
15. mt-atp6 ENSDARG00000063911 759.69 5694.96 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
16. zgc:112425 zgc:112425 759.69 5694.96
17. mt-co3 ENSDARG00000063912 709.05 5315.34 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. rpl26 ENSDARG00000102317 709.05 5315.34 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
19. rpl8 ENSDARG00000014867 683.73 5125.53 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
20. mt-nd1 ENSDARG00000063895 645.74 4840.74 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. zgc:92533 zgc:92533 620.42 4650.93
22. rps23 ENSDARG00000021838 607.76 4556.03 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
23. rps27a ENSDARG00000032725, ENSDARG00000114059 595.09 4461.05 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
24. zgc:66286 zgc:66286 595.09 4461.05
25. rpl23 ENSDARG00000053457 582.43 4366.14 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
26. tpma ENSDARG00000033683 582.43 4366.14 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
27. rpl18a ENSDARG00000025073 569.77 4271.24 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
28. rpl21 ENSDARG00000010516, ENSDARG00000110263 506.46 3796.64 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
29. rpl19 ENSDARG00000013307 493.80 3701.73 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
30. rpl27 ENSDARG00000015128 481.14 3606.83 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
31. rps15 ENSDARG00000070849, ENSDARG00000110979 481.14 3606.83 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
32. ckmb ENSDARG00000040565 468.48 3511.92 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
33. rpl11 ENSDARG00000043509 468.48 3511.92 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
34. rps26l ENSDARG00000030408 468.48 3511.92 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
35. rpl36 ENSDARG00000100588 443.16 3322.12 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
36. rpl9 ENSDARG00000037350, ENSDARG00000112384 443.16 3322.12 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
37. rps12 ENSDARG00000036875, ENSDARG00000115157 430.49 3227.14 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
38. rps9 ENSDARG00000011405, ENSDARG00000113248 430.49 3227.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
39. btf3 ENSDARG00000035400, ENSDARG00000116462 417.83 3132.23 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
40. cyt1l ENSDARG00000036832 405.17 3037.33 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
41. rplp1 ENSDARG00000021864 405.17 3037.33 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
42. rps3 ENSDARG00000103007 405.17 3037.33 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
43. tnnc2 ENSDARG00000070835, ENSDARG00000111155 405.17 3037.33 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
44. acta1a ENSDARG00000036371 392.51 2942.42 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
45. RPL29 ENSDARG00000077717 379.85 2847.52 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
46. eef2b ENSDARG00000100371, ENSDARG00000109247 379.85 2847.52 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
47. myl10 ENSDARG00000062592 379.85 2847.52 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
48. rpl18 ENSDARG00000029533 379.85 2847.52 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
49. mt-cyb ENSDARG00000063924 367.19 2752.61 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
50. rpl7 ENSDARG00000007320 367.19 2752.61 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
51. rps14 ENSDARG00000036629 367.19 2752.61 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
52. rps4x ENSDARG00000014690 367.19 2752.61 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
53. tpm3 ENSDARG00000005162 367.19 2752.61 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
54. col1a1a ENSDARG00000012405, ENSDARG00000116113 354.52 2657.63 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
55. rps19 ENSDARG00000030602 354.52 2657.63 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
56. fkbp1aa ENSDARG00000022684 341.86 2562.73 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
57. rpl28 ENSDARG00000005791 341.86 2562.73 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 341.86 2562.73 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. cfl1l ENSDARG00000012972 329.20 2467.82 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
60. cirbp cirbp 329.20 2467.82
61. ckma ENSDARG00000035327, ENSDARG00000114671 329.20 2467.82 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
62. fabp3 ENSDARG00000023290 329.20 2467.82 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
63. faua ENSDARG00000099022 316.54 2372.92 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
64. ptmab ENSDARG00000101766 316.54 2372.92 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
65. rpl5b ENSDARG00000015862, ENSDARG00000109661 303.88 2278.01 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
66. rps2 ENSDARG00000077291 303.88 2278.01 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
67. rps5 ENSDARG00000043453 303.88 2278.01 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
68. rpl35 ENSDARG00000018334 291.22 2183.11 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
69. rps20 ENSDARG00000036044 291.22 2183.11 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
70. eif5a ENSDARG00000017235 278.55 2088.13 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
71. mt-co1 ENSDARG00000063905 278.55 2088.13 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
72. rplp2l ENSDARG00000011201 278.55 2088.13 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
73. rps29 ENSDARG00000041232 278.55 2088.13 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
74. rps7 ENSDARG00000042566 278.55 2088.13 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
75. rpsa ENSDARG00000019181 278.55 2088.13 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
76. actc1b ENSDARG00000099197 265.89 1993.22 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
77. efemp2a ENSDARG00000094324 265.89 1993.22 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
78. hsp90aa1.1 ENSDARG00000010478 265.89 1993.22 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
79. ppiab ENSDARG00000103994 265.89 1993.22 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
80. rpl15 ENSDARG00000009285 265.89 1993.22 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
81. hmgn2 ENSDARG00000099572 253.23 1898.32 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
82. pfn1 ENSDARG00000088091 253.23 1898.32 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
83. rpl6 ENSDARG00000058451 253.23 1898.32 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
84. rps18 ENSDARG00000100392 253.23 1898.32 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
85. rps6 ENSDARG00000019778 253.23 1898.32 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
86. tnni2b.1 ENSDARG00000035958 253.23 1898.32 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
87. zgc:123194 zgc:123194 253.23 1898.32
88. cfl1 ENSDARG00000021124 240.57 1803.41 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
89. rpl17 ENSDARG00000057556 227.91 1708.51 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
90. rpl38 ENSDARG00000006413 227.91 1708.51 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
91. zgc:113413 zgc:113413 227.91 1708.51
92. rpl39 ENSDARG00000036316, ENSDARG00000117167 215.25 1613.61 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
93. rps24 ENSDARG00000039347 215.25 1613.61 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
94. si:dkeyp-86f7.3 si:dkeyp-86f7.3 215.25 1613.61
95. hnrnpa0a ENSDARG00000089302 202.59 1518.70 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
96. ran ENSDARG00000057026 202.59 1518.70 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
97. rpl30 ENSDARG00000035871, ENSDARG00000109253 202.59 1518.70 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
98. rplp0 ENSDARG00000051783 202.59 1518.70 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
99. rps15a ENSDARG00000010160 202.59 1518.70 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
100. rps27.1 ENSDARG00000023298 202.59 1518.70 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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