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Experiment Zebrafish_28hpf_whole2, section s62.

Sample reads: 133,398. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 4562.64 34203.28 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tmsb4x ENSDARG00000077777 2483.46 18616.96 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
3. AC024175.4 AC024175.4 1801.95 13508.10
4. mt-nd2 ENSDARG00000063899 1628.69 12209.28 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co2 ENSDARG00000063908 1570.93 11776.29 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd1 ENSDARG00000063895 1212.85 9091.98 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
7. mt-atp6 ENSDARG00000063911 1166.65 8745.65 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. eef1a1l1 ENSDARG00000020850 1132.00 8485.90 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
9. tpma ENSDARG00000033683 1108.90 8312.73 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
10. actb1 ENSDARG00000037746, ENSDARG00000113649 1028.04 7706.58 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
11. si:dkey-151g10.6 si:dkey-151g10.6 993.39 7446.83
12. actb2 ENSDARG00000037870 877.88 6580.92 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. mt-co3 ENSDARG00000063912 877.88 6580.92 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. hspa8 ENSDARG00000068992, ENSDARG00000114726 831.67 6234.51 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
15. ppiaa ENSDARG00000009212 797.02 5974.76 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. mt-nd4 ENSDARG00000063917 762.37 5715.01 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. ckmb ENSDARG00000040565 727.71 5455.19 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
18. zgc:66286 zgc:66286 716.16 5368.61
19. myl10 ENSDARG00000062592 704.61 5282.02 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
20. rpl10a ENSDARG00000042905, ENSDARG00000115649 704.61 5282.02 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
21. rps27a ENSDARG00000032725, ENSDARG00000114059 669.96 5022.27 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
22. rpl21 ENSDARG00000010516, ENSDARG00000110263 658.41 4935.69 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
23. rpl36a ENSDARG00000058105, ENSDARG00000112656 646.86 4849.11 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
24. rpl8 ENSDARG00000014867 646.86 4849.11 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
25. rps23 ENSDARG00000021838 635.30 4762.45 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
26. hmga1a ENSDARG00000028335 623.75 4675.87 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
27. RPL29 ENSDARG00000077717 612.20 4589.28 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
28. zgc:92533 zgc:92533 589.10 4416.12
29. rps26l ENSDARG00000030408 577.55 4329.53 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
30. rpl18a ENSDARG00000025073 566.00 4242.95 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
31. rpl26 ENSDARG00000102317 566.00 4242.95 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
32. tnnc2 ENSDARG00000070835, ENSDARG00000111155 566.00 4242.95 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
33. mt-cyb ENSDARG00000063924 519.79 3896.54 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. rps15 ENSDARG00000070849, ENSDARG00000110979 508.24 3809.96 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
35. eef2b ENSDARG00000100371, ENSDARG00000109247 496.69 3723.38 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
36. rps4x ENSDARG00000014690 496.69 3723.38 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
37. zgc:112425 zgc:112425 496.69 3723.38
38. btf3 ENSDARG00000035400, ENSDARG00000116462 485.14 3636.79 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. fabp3 ENSDARG00000023290 473.59 3550.21 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. rpl23 ENSDARG00000053457 473.59 3550.21 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
41. rps12 ENSDARG00000036875, ENSDARG00000115157 462.04 3463.63 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
42. cfl1l ENSDARG00000012972 450.49 3377.04 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
43. rpl9 ENSDARG00000037350, ENSDARG00000112384 450.49 3377.04 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
44. rps20 ENSDARG00000036044 450.49 3377.04 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
45. rpl7 ENSDARG00000007320 438.94 3290.46 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
46. rps9 ENSDARG00000011405, ENSDARG00000113248 438.94 3290.46 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
47. tpm3 ENSDARG00000005162 438.94 3290.46 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
48. ckma ENSDARG00000035327, ENSDARG00000114671 427.39 3203.88 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
49. rpl27 ENSDARG00000015128 427.39 3203.88 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
50. rps19 ENSDARG00000030602 427.39 3203.88 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
51. cyt1l ENSDARG00000036832 415.84 3117.29 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
52. eif5a ENSDARG00000017235 404.28 3030.64 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. rps5 ENSDARG00000043453 404.28 3030.64 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
54. rpl11 ENSDARG00000043509 381.18 2857.47 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
55. rpl18 ENSDARG00000029533 381.18 2857.47 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
56. rplp1 ENSDARG00000021864 381.18 2857.47 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
57. hbbe3 ENSDARG00000038147, ENSDARG00000109344 358.08 2684.30 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
58. rpl36 ENSDARG00000100588 358.08 2684.30 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
59. rpl6 ENSDARG00000058451 358.08 2684.30 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
60. id1 ENSDARG00000040764 334.98 2511.14 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
61. rps15a ENSDARG00000010160 334.98 2511.14 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
62. rpl14 ENSDARG00000103433 311.88 2337.97 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
63. rplp0 ENSDARG00000051783 311.88 2337.97 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
64. acta1a ENSDARG00000036371 300.33 2251.39 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
65. col1a1a ENSDARG00000012405, ENSDARG00000116113 300.33 2251.39 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
66. hsp90aa1.1 ENSDARG00000010478 300.33 2251.39 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
67. rpl39 ENSDARG00000036316, ENSDARG00000117167 300.33 2251.39 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
68. rps14 ENSDARG00000036629 300.33 2251.39 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
69. rps29 ENSDARG00000041232 300.33 2251.39 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
70. rpl15 ENSDARG00000009285 288.77 2164.73 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
71. rpl19 ENSDARG00000013307 288.77 2164.73 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
72. rps2 ENSDARG00000077291 288.77 2164.73 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
73. RPS17L RPS17L 277.22 2078.15
74. rpl28 ENSDARG00000005791 277.22 2078.15 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
75. rps24 ENSDARG00000039347 277.22 2078.15 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
76. rps27.1 ENSDARG00000023298 277.22 2078.15 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
77. faua ENSDARG00000099022 265.67 1991.56 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
78. rpl22 ENSDARG00000070437 265.67 1991.56 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
79. actc1b ENSDARG00000099197 254.12 1904.98 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
80. aldoab ENSDARG00000034470 254.12 1904.98 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
81. ptmab ENSDARG00000101766 254.12 1904.98 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
82. rps6 ENSDARG00000019778 254.12 1904.98 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
83. cirbp cirbp 242.57 1818.40
84. hsp90ab1 ENSDARG00000029150 242.57 1818.40 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
85. myhz2 ENSDARG00000012944 242.57 1818.40 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
86. rpl35 ENSDARG00000018334 242.57 1818.40 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
87. rps10 ENSDARG00000034897 242.57 1818.40 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
88. rps7 ENSDARG00000042566 242.57 1818.40 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
89. RPL37A RPL37A 231.02 1731.81
90. fkbp1aa ENSDARG00000022684 231.02 1731.81 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
91. mylz3 ENSDARG00000017441 231.02 1731.81 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
92. rpsa ENSDARG00000019181 231.02 1731.81 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
93. ATP5B 219.47 1645.23 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
94. acta1b ENSDARG00000055618 219.47 1645.23 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
95. hbae3 ENSDARG00000079305 219.47 1645.23 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
96. rpl5b ENSDARG00000015862, ENSDARG00000109661 219.47 1645.23 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
97. rplp2l ENSDARG00000011201 219.47 1645.23 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
98. rpl38 ENSDARG00000006413 207.92 1558.65 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
99. tpm2 ENSDARG00000104682 207.92 1558.65 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
100. rps3 ENSDARG00000103007 196.37 1472.06 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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