Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s59.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 4835.89 36251.90 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 4045.80 30329.05
3. mt-nd2 ENSDARG00000063899 3037.75 22772.27 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. actc1b ENSDARG00000099197 2887.91 21649.01 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
5. mt-nd4 ENSDARG00000063917 2111.44 15828.26 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. tpma ENSDARG00000033683 1675.53 12560.49 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
7. mt-co2 ENSDARG00000063908 1471.20 11028.74 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-atp6 ENSDARG00000063911 1348.60 10109.68 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. eef2b ENSDARG00000100371, ENSDARG00000109247 1321.36 9905.48 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1185.13 8884.24 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mt-nd1 ENSDARG00000063895 1171.51 8782.14 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
12. mt-co3 ENSDARG00000063912 1157.89 8680.04 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. atp2a1 ENSDARG00000020574 1144.27 8577.94 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. eef1a1l1 ENSDARG00000020850 1076.16 8067.36 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. ckmb ENSDARG00000040565 871.82 6535.54 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
16. rps26l ENSDARG00000030408 871.82 6535.54 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
17. tnnc2 ENSDARG00000070835, ENSDARG00000111155 871.82 6535.54 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
18. acta1a ENSDARG00000036371 667.49 5003.79 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
19. actb2 ENSDARG00000037870 640.24 4799.51 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
20. myhz1.3 ENSDARG00000067997 640.24 4799.51 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
21. acta1b ENSDARG00000055618 613.00 4595.31 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
22. hmga1a ENSDARG00000028335 599.38 4493.21 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
23. tmsb4x ENSDARG00000077777 599.38 4493.21 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
24. actb1 ENSDARG00000037746, ENSDARG00000113649 558.51 4186.83 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
25. rpl8 ENSDARG00000014867 558.51 4186.83 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
26. mt-cyb ENSDARG00000063924 544.89 4084.73 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 544.89 4084.73 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
28. ppiaa ENSDARG00000009212 517.64 3880.45 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. aldoab ENSDARG00000034470 504.02 3778.35 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
30. mt-co1 ENSDARG00000063905 504.02 3778.35 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
31. rpl18a ENSDARG00000025073 490.40 3676.25 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
32. myl10 ENSDARG00000062592 463.16 3472.05 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
33. myhz2 ENSDARG00000012944 435.91 3267.77 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
34. mylz3 ENSDARG00000017441 435.91 3267.77 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
35. cyt1l ENSDARG00000036832 422.29 3165.67 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
36. rpl26 ENSDARG00000102317 422.29 3165.67 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
37. eif5a ENSDARG00000017235 408.67 3063.56 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
38. rpl9 ENSDARG00000037350, ENSDARG00000112384 408.67 3063.56 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
39. si:dkey-151g10.6 si:dkey-151g10.6 408.67 3063.56
40. zgc:66286 zgc:66286 408.67 3063.56
41. btf3 ENSDARG00000035400, ENSDARG00000116462 395.04 2961.39 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. rpl10a ENSDARG00000042905, ENSDARG00000115649 367.80 2757.19 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
43. apoa1b ENSDARG00000101324 354.18 2655.08 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
44. hsp90aa1.1 ENSDARG00000010478 354.18 2655.08 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
45. rplp1 ENSDARG00000021864 340.56 2552.98 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
46. rpl36 ENSDARG00000100588 326.93 2450.81 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
47. rps15a ENSDARG00000010160 326.93 2450.81 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
48. zgc:92533 zgc:92533 326.93 2450.81
49. zgc:113413 zgc:113413 313.31 2348.71
50. zgc:165571 zgc:165571 313.31 2348.71
51. gnb2l1 299.69 2246.60 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
52. rpl27 ENSDARG00000015128 299.69 2246.60 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
53. rps14 ENSDARG00000036629 299.69 2246.60 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
54. rps3 ENSDARG00000103007 299.69 2246.60 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
55. ATP5B 286.07 2144.50 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
56. tnni2a.4 ENSDARG00000029069 286.07 2144.50 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
57. zgc:153129 zgc:153129 286.07 2144.50
58. col1a1a ENSDARG00000012405, ENSDARG00000116113 272.44 2042.33 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
59. pvalb2 ENSDARG00000002768, ENSDARG00000114085 272.44 2042.33 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
60. rps12 ENSDARG00000036875, ENSDARG00000115157 272.44 2042.33 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
61. smyhc1 ENSDARG00000099959, ENSDARG00000115916 272.44 2042.33 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
62. tpm3 ENSDARG00000005162 272.44 2042.33 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
63. hbbe3 ENSDARG00000038147, ENSDARG00000109344 258.82 1940.23 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
64. rpl14 ENSDARG00000103433 258.82 1940.23 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
65. rpl18 ENSDARG00000029533 258.82 1940.23 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
66. rpl36a ENSDARG00000058105, ENSDARG00000112656 258.82 1940.23 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
67. rplp0 ENSDARG00000051783 258.82 1940.23 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
68. tnni2b.1 ENSDARG00000035958 258.82 1940.23 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
69. atp5g3b 245.20 1838.12 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
70. cfl1l ENSDARG00000012972 245.20 1838.12 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
71. rpl6 ENSDARG00000058451 245.20 1838.12 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
72. rps4x ENSDARG00000014690 245.20 1838.12 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
73. hspa8 ENSDARG00000068992, ENSDARG00000114726 231.58 1736.02 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
74. pabpc1a ENSDARG00000017219 231.58 1736.02 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
75. rpl23 ENSDARG00000053457 231.58 1736.02 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
76. rps10 ENSDARG00000034897 231.58 1736.02 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
77. rps6 ENSDARG00000019778 231.58 1736.02 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
78. rps9 ENSDARG00000011405, ENSDARG00000113248 231.58 1736.02 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
79. tnnt2c ENSDARG00000032242 231.58 1736.02 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
80. ttna ttna 231.58 1736.02
81. zgc:112425 zgc:112425 231.58 1736.02
82. faua ENSDARG00000099022 217.96 1633.92 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
83. fth1a ENSDARG00000015551 217.96 1633.92 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
84. rpl22 ENSDARG00000070437 217.96 1633.92 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
85. rpl30 ENSDARG00000035871, ENSDARG00000109253 217.96 1633.92 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
86. rps20 ENSDARG00000036044 217.96 1633.92 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
87. rps27a ENSDARG00000032725, ENSDARG00000114059 217.96 1633.92 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
88. rps5 ENSDARG00000043453 217.96 1633.92 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
89. uba52 ENSDARG00000041435 217.96 1633.92 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
90. apoc1l apoc1l 204.33 1531.74
91. apoeb ENSDARG00000040295 204.33 1531.74 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
92. fabp3 ENSDARG00000023290 204.33 1531.74 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
93. h1f0 ENSDARG00000038559 204.33 1531.74 H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
94. hbae3 ENSDARG00000079305 204.33 1531.74 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
95. ldb3b ENSDARG00000099974 204.33 1531.74 LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
96. bzw1a ENSDARG00000010481 190.71 1429.64 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
97. hsp90ab1 ENSDARG00000029150 190.71 1429.64 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
98. krt8 ENSDARG00000058358, ENSDARG00000109279 190.71 1429.64 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
99. rpl19 ENSDARG00000013307 190.71 1429.64 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
100. rpl35 ENSDARG00000018334 190.71 1429.64 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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