Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s58.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 3816.10 28604.17 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 3647.79 27342.58
3. mt-co2 ENSDARG00000063908 2135.50 16006.97 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
4. mt-nd2 ENSDARG00000063899 1807.43 13547.87 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. tpma ENSDARG00000033683 1715.96 12862.24 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. mt-atp6 ENSDARG00000063911 1411.07 10576.89 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. tmsb4x ENSDARG00000077777 1319.60 9891.27 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. mt-co3 ENSDARG00000063912 1234.22 9251.29 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
9. ckmb ENSDARG00000040565 1225.69 9187.35 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. mt-nd4 ENSDARG00000063917 1172.03 8785.13 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
11. si:dkey-151g10.6 si:dkey-151g10.6 1069.58 8017.20
12. mt-nd1 ENSDARG00000063895 1036.65 7770.37 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. eef1a1l1 ENSDARG00000020850 984.21 7377.30 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. ckma ENSDARG00000035327, ENSDARG00000114671 880.54 6600.22 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
15. ppiaa ENSDARG00000009212 831.76 6234.59 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. actb2 ENSDARG00000037870 826.88 6198.01 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. actc1b ENSDARG00000099197 823.22 6170.57 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
18. rpl23 ENSDARG00000053457 656.14 4918.20 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. mylz3 ENSDARG00000017441 651.26 4881.62 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
20. hmga1a ENSDARG00000028335 629.31 4717.09 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
21. mt-cyb ENSDARG00000063924 619.55 4643.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
22. zgc:66286 zgc:66286 591.50 4433.68
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 578.09 4333.16 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. tnnc2 ENSDARG00000070835, ENSDARG00000111155 569.55 4269.15 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
25. rpl8 ENSDARG00000014867 565.89 4241.72 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
26. actb1 ENSDARG00000037746, ENSDARG00000113649 561.01 4205.14 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. zgc:112425 zgc:112425 554.91 4159.41
28. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 550.03 4122.84 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
29. eef2b ENSDARG00000100371, ENSDARG00000109247 548.82 4113.77 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
30. rps23 ENSDARG00000021838 531.74 3985.74 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
31. rpl21 ENSDARG00000010516, ENSDARG00000110263 515.89 3866.93 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
32. atp2a1 ENSDARG00000020574 511.01 3830.35 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
33. hspa8 ENSDARG00000068992, ENSDARG00000114726 493.93 3702.33 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
34. rpl18a ENSDARG00000025073 485.40 3638.39 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
35. myl10 ENSDARG00000062592 461.00 3455.50 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
36. zgc:92533 zgc:92533 454.91 3409.85
37. rpl9 ENSDARG00000037350, ENSDARG00000112384 452.47 3391.56 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
38. rpl26 ENSDARG00000102317 442.71 3318.40 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
39. rpl36a ENSDARG00000058105, ENSDARG00000112656 439.05 3290.97 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
40. rps27a ENSDARG00000032725, ENSDARG00000114059 439.05 3290.97 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 430.52 3227.03 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. rps20 ENSDARG00000036044 430.52 3227.03 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
43. rps26l ENSDARG00000030408 426.86 3199.60 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
44. rplp1 ENSDARG00000021864 419.54 3144.73 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
45. aldoab ENSDARG00000034470 414.66 3108.15 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
46. rpl36 ENSDARG00000100588 393.93 2952.76 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
47. acta1b ENSDARG00000055618 390.27 2925.33 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
48. myhz2 ENSDARG00000012944 386.61 2897.90 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
49. rpl27 ENSDARG00000015128 385.39 2888.75 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
50. mt-co1 ENSDARG00000063905 370.76 2779.09 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
51. rps12 ENSDARG00000036875, ENSDARG00000115157 369.54 2769.94 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
52. eif5a ENSDARG00000017235 367.10 2751.66 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. rps2 ENSDARG00000077291 364.66 2733.37 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
54. rpl19 ENSDARG00000013307 362.22 2715.08 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
55. hsp90aa1.1 ENSDARG00000010478 343.92 2577.91 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
56. myl1 ENSDARG00000014196 337.83 2532.26 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
57. acta1a ENSDARG00000036371 335.39 2513.97 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
58. rps14 ENSDARG00000036629 334.17 2504.82 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
59. cyt1l ENSDARG00000036832 323.19 2422.52 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
60. tpm3 ENSDARG00000005162 320.75 2404.23 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
61. rps9 ENSDARG00000011405, ENSDARG00000113248 318.31 2385.94 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
62. rpl18 ENSDARG00000029533 312.21 2340.22 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
63. rplp0 ENSDARG00000051783 312.21 2340.22 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
64. rps5 ENSDARG00000043453 312.21 2340.22 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
65. fabp3 ENSDARG00000023290 311.00 2331.15 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
66. rps15 ENSDARG00000070849, ENSDARG00000110979 311.00 2331.15 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
67. rps29 ENSDARG00000041232 308.56 2312.86 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
68. tnni2b.1 ENSDARG00000035958 304.90 2285.43 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
69. col1a1a ENSDARG00000012405, ENSDARG00000116113 301.24 2257.99 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
70. rpl11 ENSDARG00000043509 298.80 2239.70 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
71. RPL29 ENSDARG00000077717 297.58 2230.56 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
72. rps15a ENSDARG00000010160 290.26 2175.69 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
73. myhz1.3 ENSDARG00000067997 289.04 2166.54 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
74. rpl7 ENSDARG00000007320 287.82 2157.40 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
75. ptmab ENSDARG00000101766 278.07 2084.32 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
76. cirbp cirbp 274.41 2056.88
77. rpl6 ENSDARG00000058451 274.41 2056.88 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
78. rpsa ENSDARG00000019181 274.41 2056.88 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
79. rpl15 ENSDARG00000009285 270.75 2029.45 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
80. id1 ENSDARG00000040764 263.43 1974.58 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
81. rps19 ENSDARG00000030602 258.55 1938.00 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
82. rplp2l ENSDARG00000011201 256.11 1919.71 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
83. faua ENSDARG00000099022 254.89 1910.57 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
84. rps6 ENSDARG00000019778 250.02 1874.06 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
85. cfl1l ENSDARG00000012972 245.14 1837.48 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
86. rps24 ENSDARG00000039347 245.14 1837.48 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
87. rps4x ENSDARG00000014690 241.48 1810.05 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
88. rps10 ENSDARG00000034897 237.82 1782.62 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
89. rpl35 ENSDARG00000018334 235.38 1764.33 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
90. tnni2a.4 ENSDARG00000029069 234.16 1755.18 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
91. tnnt3a ENSDARG00000030270 229.28 1718.60 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
92. rps3 ENSDARG00000103007 226.84 1700.31 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
93. rpl14 ENSDARG00000103433 224.40 1682.03 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
94. rps27.1 ENSDARG00000023298 221.97 1663.81 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
95. rpl5b ENSDARG00000015862, ENSDARG00000109661 219.53 1645.52 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
96. smyhc1 ENSDARG00000099959, ENSDARG00000115916 219.53 1645.52 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
97. tnnt2c ENSDARG00000032242 219.53 1645.52 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
98. rps7 ENSDARG00000042566 212.21 1590.65 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
99. rps13 ENSDARG00000036298, ENSDARG00000112818 208.55 1563.22 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
100. rpl23a ENSDARG00000006316 204.89 1535.78 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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