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Experiment Zebrafish_28hpf_whole2, section s57.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 5809.37 43549.33
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4001.88 29999.67 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1975.39 14808.30 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tpma ENSDARG00000033683 1848.37 13856.11 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. ckmb ENSDARG00000040565 1502.35 11262.21 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-co2 ENSDARG00000063908 1376.79 10320.96 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-nd4 ENSDARG00000063917 1222.03 9160.82 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. tmsb4x ENSDARG00000077777 1078.95 8088.24 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. eef1a1l1 ENSDARG00000020850 1074.57 8055.40 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. actb2 ENSDARG00000037870 1011.79 7584.78 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. mt-atp6 ENSDARG00000063911 1010.33 7573.83 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
12. mt-co3 ENSDARG00000063912 969.45 7267.38 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. si:dkey-151g10.6 si:dkey-151g10.6 957.77 7179.82
14. ckma ENSDARG00000035327, ENSDARG00000114671 921.27 6906.20 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
15. mt-nd1 ENSDARG00000063895 877.46 6577.79 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. actc1b ENSDARG00000099197 846.80 6347.95 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
17. ppiaa ENSDARG00000009212 770.88 5778.82 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. actb1 ENSDARG00000037746, ENSDARG00000113649 769.42 5767.88 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
19. zgc:66286 zgc:66286 671.60 5034.58
20. mylz3 ENSDARG00000017441 643.86 4826.63 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
21. atp2a1 ENSDARG00000020574 635.10 4760.96 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 601.52 4509.23 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
23. rpl8 ENSDARG00000014867 566.48 4246.56 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
24. hspa8 ENSDARG00000068992, ENSDARG00000114726 563.56 4224.67 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
25. hmga1a ENSDARG00000028335 560.64 4202.78 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
26. eef2b ENSDARG00000100371, ENSDARG00000109247 559.18 4191.83 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
27. tnnc2 ENSDARG00000070835, ENSDARG00000111155 535.82 4016.72 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
28. rpl23 ENSDARG00000053457 534.36 4005.77 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
29. mt-cyb ENSDARG00000063924 519.76 3896.33 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. zgc:112425 zgc:112425 516.84 3874.44
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 503.70 3775.93 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. rps23 ENSDARG00000021838 499.32 3743.10 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
33. btf3 ENSDARG00000035400, ENSDARG00000116462 468.66 3513.26 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
34. acta1a ENSDARG00000036371 462.82 3469.48 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
35. rpl18a ENSDARG00000025073 454.06 3403.81 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. rpl36a ENSDARG00000058105, ENSDARG00000112656 454.06 3403.81 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
37. myl10 ENSDARG00000062592 452.60 3392.87 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
38. rps27a ENSDARG00000032725, ENSDARG00000114059 448.22 3360.03 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
39. rpl21 ENSDARG00000010516, ENSDARG00000110263 445.30 3338.14 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
40. rpl26 ENSDARG00000102317 442.38 3316.26 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
41. acta1b ENSDARG00000055618 411.72 3086.42 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
42. myhz1.3 ENSDARG00000067997 402.96 3020.75 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
43. rplp1 ENSDARG00000021864 388.36 2911.30 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
44. rpl19 ENSDARG00000013307 381.06 2856.58 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
45. fabp3 ENSDARG00000023290 378.14 2834.69 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
46. rps14 ENSDARG00000036629 373.76 2801.85 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
47. rpl18 ENSDARG00000029533 372.30 2790.91 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
48. aldoab ENSDARG00000034470 360.62 2703.35 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
49. zgc:92533 zgc:92533 359.16 2692.41
50. mt-co1 ENSDARG00000063905 357.70 2681.46 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
51. rpl27 ENSDARG00000015128 353.32 2648.63 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. eif5a ENSDARG00000017235 350.40 2626.74 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. myl1 ENSDARG00000014196 348.94 2615.79 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
54. myhz2 ENSDARG00000012944 347.48 2604.85 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
55. tnni2b.1 ENSDARG00000035958 340.18 2550.12 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
56. rpl9 ENSDARG00000037350, ENSDARG00000112384 337.26 2528.23 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
57. tpm3 ENSDARG00000005162 334.34 2506.34 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
58. hsp90aa1.1 ENSDARG00000010478 319.74 2396.90 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
59. rps12 ENSDARG00000036875, ENSDARG00000115157 319.74 2396.90 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
60. rps2 ENSDARG00000077291 316.82 2375.01 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
61. rpl11 ENSDARG00000043509 315.36 2364.06 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. rps26l ENSDARG00000030408 313.90 2353.12 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
63. col1a1a ENSDARG00000012405, ENSDARG00000116113 309.52 2320.28 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
64. rps20 ENSDARG00000036044 305.14 2287.45 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
65. rps9 ENSDARG00000011405, ENSDARG00000113248 296.38 2221.78 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
66. rpl7 ENSDARG00000007320 294.92 2210.84 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
67. cfl1l ENSDARG00000012972 287.62 2156.11 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
68. rpl15 ENSDARG00000009285 287.62 2156.11 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
69. rps15 ENSDARG00000070849, ENSDARG00000110979 278.86 2090.44 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
70. cyt1l ENSDARG00000036832 271.56 2035.72 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
71. rpsa ENSDARG00000019181 270.10 2024.78 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
72. rps5 ENSDARG00000043453 268.64 2013.83 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
73. hbae3 ENSDARG00000079305 265.72 1991.94 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
74. tnnt3a ENSDARG00000030270 258.42 1937.22 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
75. hbbe3 ENSDARG00000038147, ENSDARG00000109344 255.50 1915.33 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
76. rpl36 ENSDARG00000100588 252.58 1893.44 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
77. RPL29 ENSDARG00000077717 251.12 1882.49 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
78. ttna ttna 251.12 1882.49
79. rpl6 ENSDARG00000058451 246.74 1849.66 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
80. rps15a ENSDARG00000010160 240.90 1805.88 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
81. cirbp cirbp 237.98 1783.99
82. fkbp1aa ENSDARG00000022684 236.52 1773.05 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
83. rplp0 ENSDARG00000051783 236.52 1773.05 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
84. rps4x ENSDARG00000014690 236.52 1773.05 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
85. rps6 ENSDARG00000019778 236.52 1773.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
86. faua ENSDARG00000099022 232.14 1740.21 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
87. rplp2l ENSDARG00000011201 232.14 1740.21 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
88. tnnt2c ENSDARG00000032242 230.68 1729.27 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
89. ptmab ENSDARG00000101766 220.46 1652.66 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
90. rpl5b ENSDARG00000015862, ENSDARG00000109661 219.00 1641.71 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
91. cox8a ENSDARG00000095273 217.54 1630.77 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
92. rpl14 ENSDARG00000103433 216.08 1619.82 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
93. rps27.1 ENSDARG00000023298 214.62 1608.88 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
94. cycsb ENSDARG00000044562 210.24 1576.04 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
95. rps24 ENSDARG00000039347 208.78 1565.10 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
96. zgc:113413 zgc:113413 208.78 1565.10
97. smyhc1 ENSDARG00000099959, ENSDARG00000115916 207.32 1554.15 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
98. cfl1 ENSDARG00000021124 205.86 1543.21 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
99. rps10 ENSDARG00000034897 202.94 1521.32 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
100. rps3 ENSDARG00000103007 202.94 1521.32 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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