Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s37.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11444.95 85792.65
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3342.33 25054.49 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2659.40 19935.16 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckma ENSDARG00000035327, ENSDARG00000114671 1888.20 14154.16 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. ckmb ENSDARG00000040565 1876.62 14067.36 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. mt-nd2 ENSDARG00000063899 1575.67 11811.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-co2 ENSDARG00000063908 1442.56 10813.59 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. atp2a1 ENSDARG00000020574 1380.34 10347.19 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
9. mt-nd4 ENSDARG00000063917 1374.55 10303.78 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. mt-atp6 ENSDARG00000063911 1247.22 9349.30 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. tmsb4x ENSDARG00000077777 1200.92 9002.23 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1093.85 8199.62 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. mylz3 ENSDARG00000017441 1066.36 7993.56 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mt-co3 ENSDARG00000063912 1034.53 7754.95 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. mt-nd1 ENSDARG00000063895 969.42 7266.88 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. pvalb2 ENSDARG00000002768, ENSDARG00000114085 957.85 7180.15 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
17. actc1b ENSDARG00000099197 914.44 6854.75 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
18. eef1a1l1 ENSDARG00000020850 904.31 6778.81 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. tnnc2 ENSDARG00000070835, ENSDARG00000111155 863.80 6475.14 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
20. myhz1.3 ENSDARG00000067997 746.60 5596.60 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
21. actb2 ENSDARG00000037870 706.09 5292.93 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. apoa1b ENSDARG00000101324 687.28 5151.93 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
23. acta1b ENSDARG00000055618 667.02 5000.06 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
24. apoc1l apoc1l 578.76 4338.45
25. mt-cyb ENSDARG00000063924 572.97 4295.05 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. actb1 ENSDARG00000037746, ENSDARG00000113649 558.50 4186.58 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. zgc:161979 zgc:161979 541.14 4056.45
28. ppiaa ENSDARG00000009212 538.25 4034.78 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. si:dkey-151g10.6 si:dkey-151g10.6 529.56 3969.64
30. apobb apobb 525.22 3937.11
31. apoeb ENSDARG00000040295 520.88 3904.58 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
32. zgc:161979_1 zgc:161979_1 513.65 3850.38
33. aldoab ENSDARG00000034470 471.69 3535.84 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
34. hmga1a ENSDARG00000028335 454.33 3405.71 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
35. zgc:112425 zgc:112425 434.07 3253.84
36. hspa8 ENSDARG00000068992, ENSDARG00000114726 428.28 3210.44 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
37. rps27a ENSDARG00000032725, ENSDARG00000114059 423.94 3177.90 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 421.05 3156.24 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. rpl23 ENSDARG00000053457 419.60 3145.37 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
40. rpl8 ENSDARG00000014867 418.15 3134.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 412.37 3091.17 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. tnnt3a ENSDARG00000030270 409.47 3069.43 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
43. acta1a ENSDARG00000036371 405.13 3036.90 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
44. apoa2 ENSDARG00000015866 393.56 2950.17 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
45. rpl18a ENSDARG00000025073 355.94 2668.17 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
46. si:ch211-226o13.2 354.49 2657.30 si:ch211-226o13.2
47. eef2b ENSDARG00000100371, ENSDARG00000109247 341.47 2559.70 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
48. myl1 ENSDARG00000014196 337.13 2527.16 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
49. rplp1 ENSDARG00000021864 337.13 2527.16 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
50. rpl36a ENSDARG00000058105, ENSDARG00000112656 334.23 2505.43 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
51. rpl21 ENSDARG00000010516, ENSDARG00000110263 325.55 2440.36 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
52. rps26l ENSDARG00000030408 324.10 2429.49 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
53. eif5a ENSDARG00000017235 315.42 2364.42 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
54. rpl26 ENSDARG00000102317 313.98 2353.63 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
55. rpl19 ENSDARG00000013307 306.74 2299.36 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
56. ttna ttna 306.74 2299.36
57. mylpfb ENSDARG00000002589 305.30 2288.56 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
58. zgc:66286 zgc:66286 300.95 2255.96
59. tnni2b.1 ENSDARG00000035958 293.72 2201.76 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. zgc:92533 zgc:92533 293.72 2201.76
61. rpl11 ENSDARG00000043509 287.93 2158.36 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. pvalb1 ENSDARG00000037789 286.49 2147.56 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
63. rpsa ENSDARG00000019181 286.49 2147.56 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
64. tpm3 ENSDARG00000005162 286.49 2147.56 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
65. rps23 ENSDARG00000021838 283.59 2125.82 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
66. tnnt3b ENSDARG00000068457 283.59 2125.82 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
67. cyt1l ENSDARG00000036832 276.36 2071.63 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
68. mt-co1 ENSDARG00000063905 276.36 2071.63 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
69. tnni2a.4 ENSDARG00000029069 266.23 1995.69 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
70. rpl27 ENSDARG00000015128 258.99 1941.42 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
71. rps2 ENSDARG00000077291 257.55 1930.62 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. myl10 ENSDARG00000062592 256.10 1919.75 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
73. rps14 ENSDARG00000036629 248.87 1865.56 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
74. rps5 ENSDARG00000043453 248.87 1865.56 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
75. rps20 ENSDARG00000036044 247.42 1854.69 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
76. ptmab ENSDARG00000101766 240.18 1800.42 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
77. rpl7 ENSDARG00000007320 240.18 1800.42 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
78. fabp3 ENSDARG00000023290 234.40 1757.09 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
79. apoa1a ENSDARG00000012076, ENSDARG00000110395 228.61 1713.69 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
80. rps15 ENSDARG00000070849, ENSDARG00000110979 225.72 1692.02 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
81. rps6 ENSDARG00000019778 225.72 1692.02 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
82. rps3 ENSDARG00000103007 222.82 1670.28 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
83. zgc:153129 zgc:153129 222.82 1670.28
84. rpl9 ENSDARG00000037350, ENSDARG00000112384 221.38 1659.49 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
85. rpl18 ENSDARG00000029533 218.48 1637.75 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
86. tmem38a ENSDARG00000024047 215.59 1616.09 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
87. rpl5b ENSDARG00000015862, ENSDARG00000109661 214.14 1605.22 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
88. rplp0 ENSDARG00000051783 211.25 1583.55 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
89. faua ENSDARG00000099022 206.91 1551.02 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
90. ttnb ttnb 206.91 1551.02
91. rpl6 ENSDARG00000058451 204.01 1529.28 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
92. rbfox1l ENSDARG00000021184, ENSDARG00000111700 202.57 1518.49 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
93. rps12 ENSDARG00000036875, ENSDARG00000115157 201.12 1507.62 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
94. zgc:113413 zgc:113413 198.22 1485.88
95. rpl36 ENSDARG00000100588 196.78 1475.09 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
96. rps9 ENSDARG00000011405, ENSDARG00000113248 196.78 1475.09 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
97. nme2b.2 ENSDARG00000099420 195.33 1464.22 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
98. rps24 ENSDARG00000039347 195.33 1464.22 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
99. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 193.88 1453.35 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
100. cfl1l ENSDARG00000012972 192.44 1442.55 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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