Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s36.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 5626.47 42174.11
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3640.56 27288.40 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2899.68 21735.02 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2151.53 16127.14 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. ckma ENSDARG00000035327, ENSDARG00000114671 2058.62 15430.72 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. mt-nd2 ENSDARG00000063899 1834.02 13747.19 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-co2 ENSDARG00000063908 1792.81 13438.30 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-atp6 ENSDARG00000063911 1559.32 11688.13 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. atp2a1 ENSDARG00000020574 1354.91 10155.95 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. tmsb4x ENSDARG00000077777 1284.62 9629.08 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1198.98 8987.15 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
12. mt-nd4 ENSDARG00000063917 1173.12 8793.31 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mylz3 ENSDARG00000017441 1130.30 8472.35 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1110.91 8327.00 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
15. mt-co3 ENSDARG00000063912 1107.68 8302.79 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. actc1b ENSDARG00000099197 1047.89 7854.63 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
17. mt-nd1 ENSDARG00000063895 908.93 6813.03 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 842.68 6316.44 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. apoa1b ENSDARG00000101324 838.64 6286.16 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
20. si:dkey-151g10.6 si:dkey-151g10.6 805.51 6037.83
21. eef1a1l1 ENSDARG00000020850 803.09 6019.69 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. myhz1.3 ENSDARG00000067997 780.47 5850.14 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
23. actb2 ENSDARG00000037870 776.43 5819.86 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
24. mt-cyb ENSDARG00000063924 641.50 4808.47 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. zgc:161979 zgc:161979 629.38 4717.62
26. actb1 ENSDARG00000037746, ENSDARG00000113649 624.53 4681.27 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. apoc1l apoc1l 616.46 4620.78
28. apobb apobb 599.49 4493.57
29. acta1b ENSDARG00000055618 587.37 4402.73 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
30. ppiaa ENSDARG00000009212 534.85 4009.05 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
31. zgc:161979_1 zgc:161979_1 492.84 3694.16
32. apoa2 ENSDARG00000015866 483.15 3621.53 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
33. apoeb ENSDARG00000040295 483.15 3621.53 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
34. rpl23 ENSDARG00000053457 472.64 3542.75 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
35. rpl18a ENSDARG00000025073 468.60 3512.47 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. myl1 ENSDARG00000014196 453.25 3397.41 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
37. hmga1a ENSDARG00000028335 439.52 3294.49 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 437.90 3282.35 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. zgc:112425 zgc:112425 429.82 3221.78
40. si:ch211-226o13.2 428.21 3209.72 si:ch211-226o13.2
41. hspa8 ENSDARG00000068992, ENSDARG00000114726 424.97 3185.43 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
42. aldoab ENSDARG00000034470 418.51 3137.01 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
43. tnnt3a ENSDARG00000030270 416.09 3118.87 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
44. rpl8 ENSDARG00000014867 411.24 3082.52 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 386.19 2894.75 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. tnnt3b ENSDARG00000068457 383.77 2876.61 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
47. tnni2a.4 ENSDARG00000029069 379.73 2846.33 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
48. acta1a ENSDARG00000036371 370.84 2779.69 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
49. rps27a ENSDARG00000032725, ENSDARG00000114059 370.03 2773.62 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
50. ttna ttna 366.80 2749.41
51. pvalb1 ENSDARG00000037789 347.41 2604.07 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
52. eef2b ENSDARG00000100371, ENSDARG00000109247 340.95 2555.65 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
53. zgc:66286 zgc:66286 339.33 2543.50
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 327.21 2452.66 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. rpl26 ENSDARG00000102317 314.29 2355.81 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. tnni2b.1 ENSDARG00000035958 311.06 2331.60 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
57. mt-co1 ENSDARG00000063905 307.82 2307.31 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
58. rps20 ENSDARG00000036044 305.40 2289.17 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
59. rpl36a ENSDARG00000058105, ENSDARG00000112656 304.59 2283.10 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
60. mylpfb ENSDARG00000002589 302.17 2264.96 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
61. rps23 ENSDARG00000021838 297.32 2228.61 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
62. rps26l ENSDARG00000030408 288.43 2161.97 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
63. rps14 ENSDARG00000036629 286.82 2149.91 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
64. rpl19 ENSDARG00000013307 285.20 2137.76 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
65. rps15 ENSDARG00000070849, ENSDARG00000110979 285.20 2137.76 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
66. zgc:92533 zgc:92533 281.16 2107.48
67. fabp3 ENSDARG00000023290 280.35 2101.41 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
68. myl10 ENSDARG00000062592 275.51 2065.13 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
69. rpl9 ENSDARG00000037350, ENSDARG00000112384 273.89 2052.99 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
70. eif5a ENSDARG00000017235 268.23 2010.56 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
71. rps2 ENSDARG00000077291 267.43 2004.56 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. rplp1 ENSDARG00000021864 264.20 1980.35 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
73. cyt1l ENSDARG00000036832 262.58 1968.21 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
74. tpm3 ENSDARG00000005162 256.92 1925.79 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
75. rpl27 ENSDARG00000015128 253.69 1901.57 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
76. rpl36 ENSDARG00000100588 244.00 1828.94 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
77. rpl11 ENSDARG00000043509 235.11 1762.30 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
78. rpsa ENSDARG00000019181 234.30 1756.23 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
79. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 229.45 1719.88 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
80. apoa1a ENSDARG00000012076, ENSDARG00000110395 226.22 1695.67 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
81. rps6 ENSDARG00000019778 223.80 1677.53 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
82. rpl6 ENSDARG00000058451 215.72 1616.96 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
83. rps3 ENSDARG00000103007 215.72 1616.96 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
84. rps9 ENSDARG00000011405, ENSDARG00000113248 213.30 1598.82 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
85. rps15a ENSDARG00000010160 206.02 1544.26 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
86. zgc:153129 zgc:153129 206.02 1544.26
87. rpl7 ENSDARG00000007320 203.60 1526.12 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. rplp0 ENSDARG00000051783 197.14 1477.69 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
89. atp5g3b 195.52 1465.55 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
90. ttnb ttnb 194.71 1459.48
91. cfl1l ENSDARG00000012972 193.10 1447.41 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
92. RPL29 ENSDARG00000077717 189.87 1423.20 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
93. rpl18 ENSDARG00000029533 188.25 1411.06 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
94. col1a1a ENSDARG00000012405, ENSDARG00000116113 187.44 1404.99 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
95. rps5 ENSDARG00000043453 185.83 1392.92 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
96. zgc:113413 zgc:113413 185.83 1392.92
97. nme2b.2 ENSDARG00000099420 185.02 1386.85 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
98. gapdh ENSDARG00000043457 183.40 1374.70 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
99. ATP5B 182.59 1368.63 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
100. ptmab ENSDARG00000101766 181.79 1362.64 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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