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Experiment Zebrafish_28hpf_whole2, section s34.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16199.22 121424.25
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4746.30 35576.77 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1947.35 14596.72 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. tpma ENSDARG00000033683 1694.94 12704.74 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. apoa1b ENSDARG00000101324 1564.01 11723.33 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. mt-co2 ENSDARG00000063908 1528.63 11458.13 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. apoc1l apoc1l 1400.06 10494.41
8. ckmb ENSDARG00000040565 1390.63 10423.72 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
9. mt-nd2 ENSDARG00000063899 1380.01 10344.12 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. mt-atp6 ENSDARG00000063911 1332.83 9990.47 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. mt-nd4 ENSDARG00000063917 1276.22 9566.14 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. zgc:161979_1 zgc:161979_1 1152.37 8637.80
13. apoeb ENSDARG00000040295 1121.70 8407.91 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
14. apobb apobb 1102.83 8266.47
15. apoa2 ENSDARG00000015866 1074.52 8054.26 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
16. zgc:161979 zgc:161979 1048.57 7859.75
17. actb2 ENSDARG00000037870 983.70 7373.51 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. ckma ENSDARG00000035327, ENSDARG00000114671 961.29 7205.53 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
19. mt-co3 ENSDARG00000063912 882.26 6613.14 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. atp2a1 ENSDARG00000020574 870.47 6524.77 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
21. pvalb2 ENSDARG00000002768, ENSDARG00000114085 800.88 6003.14 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
22. mylz3 ENSDARG00000017441 792.62 5941.23 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
23. actc1b ENSDARG00000099197 761.96 5711.41 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
24. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 746.62 5596.43 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
25. mt-nd1 ENSDARG00000063895 745.44 5587.58 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
26. mt-cyb ENSDARG00000063924 653.44 4897.98 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. apoa1a ENSDARG00000012076, ENSDARG00000110395 586.21 4394.05 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
28. eef1a1l1 ENSDARG00000020850 568.52 4261.45 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
29. actb1 ENSDARG00000037746, ENSDARG00000113649 564.98 4234.91 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
30. tnnc2 ENSDARG00000070835, ENSDARG00000111155 515.44 3863.58 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
31. apoa4 apoa4 421.08 3156.28
32. si:dkey-151g10.6 si:dkey-151g10.6 419.90 3147.44
33. bhmt ENSDARG00000013430 418.72 3138.59 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
34. zgc:92533 zgc:92533 417.54 3129.75
35. acta1b ENSDARG00000055618 402.21 3014.84 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
36. rbp4 ENSDARG00000101199 401.03 3005.99 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
37. myhz1.3 ENSDARG00000067997 380.98 2855.71 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
38. zgc:153129 zgc:153129 378.62 2838.02
39. hmga1a ENSDARG00000028335 375.08 2811.48 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
40. ppiaa ENSDARG00000009212 365.64 2740.72 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
41. zgc:112425 zgc:112425 351.49 2634.66
42. eef2b ENSDARG00000100371, ENSDARG00000109247 332.62 2493.21 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. cyt1l ENSDARG00000036832 326.72 2448.99 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
44. myl1 ENSDARG00000014196 322.00 2413.61 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
45. rps27a ENSDARG00000032725, ENSDARG00000114059 310.21 2325.24 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
46. mt-co1 ENSDARG00000063905 307.85 2307.55 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
47. pvalb1 ENSDARG00000037789 297.23 2227.94 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
48. rpl23 ENSDARG00000053457 284.26 2130.72 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
49. rpl8 ENSDARG00000014867 283.08 2121.88 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
50. hspa8 ENSDARG00000068992, ENSDARG00000114726 280.72 2104.19 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
51. tnnt3a ENSDARG00000030270 277.18 2077.65 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
52. fabp2 ENSDARG00000006427, ENSDARG00000110230 276.00 2068.81 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
53. si:ch211-226o13.2 267.75 2006.97 si:ch211-226o13.2
54. zgc:113413 zgc:113413 266.57 1998.12
55. aldoab ENSDARG00000034470 255.95 1918.52 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
56. ttna ttna 255.95 1918.52
57. rpl10a ENSDARG00000042905, ENSDARG00000115649 250.05 1874.30 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
58. rpl18a ENSDARG00000025073 239.44 1794.77 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
59. acta1a ENSDARG00000036371 233.54 1750.54 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
60. btf3 ENSDARG00000035400, ENSDARG00000116462 232.36 1741.70 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
61. mylpfb ENSDARG00000002589 232.36 1741.70 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
62. eif5a ENSDARG00000017235 226.46 1697.47 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
63. ptmab ENSDARG00000101766 218.21 1635.63 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
64. cfl1l ENSDARG00000012972 217.03 1626.79 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
65. rpl36a ENSDARG00000058105, ENSDARG00000112656 213.49 1600.25 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
66. tnni2a.4 ENSDARG00000029069 213.49 1600.25 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
67. rps20 ENSDARG00000036044 212.31 1591.41 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
68. tnnt3b ENSDARG00000068457 211.13 1582.56 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
69. rps23 ENSDARG00000021838 208.77 1564.87 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
70. rpl26 ENSDARG00000102317 206.41 1547.18 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
71. rps26l ENSDARG00000030408 205.23 1538.34 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
72. rpl21 ENSDARG00000010516, ENSDARG00000110263 204.05 1529.49 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
73. col1a1b ENSDARG00000035809 192.26 1441.12 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
74. rpl11 ENSDARG00000043509 192.26 1441.12 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
75. rps15 ENSDARG00000070849, ENSDARG00000110979 192.26 1441.12 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
76. pla2g12b ENSDARG00000015662 185.18 1388.05 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
77. rplp1 ENSDARG00000021864 182.82 1370.36 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
78. rpl9 ENSDARG00000037350, ENSDARG00000112384 181.64 1361.52 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
79. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 178.10 1334.98 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
80. rpl19 ENSDARG00000013307 176.92 1326.14 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
81. tfa ENSDARG00000016771 176.92 1326.14 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
82. krt8 ENSDARG00000058358, ENSDARG00000109279 174.57 1308.52 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
83. rps14 ENSDARG00000036629 174.57 1308.52 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
84. tpm3 ENSDARG00000005162 174.57 1308.52 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
85. col1a1a ENSDARG00000012405, ENSDARG00000116113 173.39 1299.68 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
86. rpsa ENSDARG00000019181 173.39 1299.68 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
87. ttnb ttnb 173.39 1299.68
88. apoc2 ENSDARG00000092155 172.21 1290.83 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
89. sepp1a 172.21 1290.83 selenoprotein P, plasma, 1a
90. rpl36 ENSDARG00000100588 169.85 1273.14 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
91. rplp0 ENSDARG00000051783 163.95 1228.92 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
92. rps3 ENSDARG00000103007 160.41 1202.38 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
93. icn ENSDARG00000009978 159.23 1193.54 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
94. rps9 ENSDARG00000011405, ENSDARG00000113248 158.05 1184.69 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
95. fetub ENSDARG00000053973 156.87 1175.85 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
96. pvalb9 ENSDARG00000071601, ENSDARG00000113946 155.69 1167.00 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
97. rps2 ENSDARG00000077291 155.69 1167.00 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
98. rps27.1 ENSDARG00000023298 154.51 1158.16 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
99. faua ENSDARG00000099022 153.33 1149.31 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
100. gapdh ENSDARG00000043457 152.16 1140.54 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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