Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s33.

Sample reads: 133,394. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7663.01 57447.39
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5328.12 39943.39 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 2203.23 16516.98 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. apoa1b ENSDARG00000101324 1962.46 14712.00 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. tpma ENSDARG00000033683 1885.97 14138.58 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. mt-nd2 ENSDARG00000063899 1603.83 12023.45 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. ckmb ENSDARG00000040565 1539.88 11544.04 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. mt-co2 ENSDARG00000063908 1492.22 11186.75 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. mt-atp6 ENSDARG00000063911 1454.61 10904.79 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. apoc1l apoc1l 1374.35 10303.11
11. zgc:161979_1 zgc:161979_1 1316.67 9870.70
12. zgc:161979 zgc:161979 1206.32 9043.44
13. ckma ENSDARG00000035327, ENSDARG00000114671 1202.56 9015.25 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
14. apobb apobb 1201.30 9005.80
15. apoa2 ENSDARG00000015866 1129.83 8470.01 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
16. mt-nd4 ENSDARG00000063917 1128.57 8460.57 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. apoeb ENSDARG00000040295 1113.53 8347.82 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
18. atp2a1 ENSDARG00000020574 964.30 7229.08 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
19. mt-co3 ENSDARG00000063912 945.49 7088.07 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. pvalb2 ENSDARG00000002768, ENSDARG00000114085 899.10 6740.30 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
21. actb2 ENSDARG00000037870 895.33 6712.03 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. actc1b ENSDARG00000099197 830.13 6223.25 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
23. mt-nd1 ENSDARG00000063895 787.49 5903.59 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 717.27 5377.17 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
25. mylz3 ENSDARG00000017441 711.00 5330.16 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
26. eef1a1l1 ENSDARG00000020850 634.51 4756.74 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
27. actb1 ENSDARG00000037746, ENSDARG00000113649 619.46 4643.91 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
28. tnnc2 ENSDARG00000070835, ENSDARG00000111155 618.21 4634.54 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
29. mt-cyb ENSDARG00000063924 616.95 4625.10 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. apoa4 apoa4 575.57 4314.88
31. apoa1a ENSDARG00000012076, ENSDARG00000110395 561.78 4211.50 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
32. si:dkey-151g10.6 si:dkey-151g10.6 546.73 4098.68
33. acta1b ENSDARG00000055618 487.79 3656.82 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
34. zgc:153129 zgc:153129 471.49 3534.63
35. zgc:92533 zgc:92533 462.72 3468.88
36. myhz1.3 ENSDARG00000067997 458.95 3440.62 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
37. bhmt ENSDARG00000013430 431.37 3233.86 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
38. zgc:112425 zgc:112425 398.76 2989.39
39. eef2b ENSDARG00000100371, ENSDARG00000109247 387.48 2904.83 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
40. ppiaa ENSDARG00000009212 377.45 2829.63 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
41. rbp4 ENSDARG00000101199 362.40 2716.81 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
42. hmga1a ENSDARG00000028335 358.64 2688.62 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. cyt1l ENSDARG00000036832 357.38 2679.18 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
44. rpl18a ENSDARG00000025073 347.35 2603.98 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
45. fabp2 ENSDARG00000006427, ENSDARG00000110230 328.54 2462.97 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
46. rpl8 ENSDARG00000014867 324.78 2434.78 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. rps27a ENSDARG00000032725, ENSDARG00000114059 312.24 2340.77 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
48. rpl23 ENSDARG00000053457 297.19 2227.95 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
49. pvalb1 ENSDARG00000037789 290.92 2180.94 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
50. myl1 ENSDARG00000014196 287.16 2152.76 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
51. rpl10a ENSDARG00000042905, ENSDARG00000115649 284.65 2133.94 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
52. zgc:113413 zgc:113413 282.14 2115.12
53. btf3 ENSDARG00000035400, ENSDARG00000116462 278.38 2086.94 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
54. hspa8 ENSDARG00000068992, ENSDARG00000114726 278.38 2086.94 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
55. rps23 ENSDARG00000021838 268.35 2011.74 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
56. tnnt3a ENSDARG00000030270 264.59 1983.56 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
57. tnnt3b ENSDARG00000068457 263.33 1974.11 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
58. fetub ENSDARG00000053973 262.08 1964.74 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
59. aldoab ENSDARG00000034470 255.81 1917.73 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
60. si:ch211-226o13.2 255.81 1917.73 si:ch211-226o13.2
61. acta1a ENSDARG00000036371 252.05 1889.55 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
62. tnni2a.4 ENSDARG00000029069 244.52 1833.10 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
63. ttna ttna 240.76 1804.91
64. mt-co1 ENSDARG00000063905 238.25 1786.09 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
65. pla2g12b ENSDARG00000015662 237.00 1776.72 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
66. krt8 ENSDARG00000058358, ENSDARG00000109279 230.73 1729.72 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
67. eif5a ENSDARG00000017235 229.48 1720.35 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. cfl1l ENSDARG00000012972 228.22 1710.90 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
69. gatm ENSDARG00000036239 220.70 1654.52 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
70. rpl36a ENSDARG00000058105, ENSDARG00000112656 214.43 1607.52 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
71. col1a1b ENSDARG00000035809 213.17 1598.07 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
72. gapdh ENSDARG00000043457 213.17 1598.07 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
73. rps15 ENSDARG00000070849, ENSDARG00000110979 213.17 1598.07 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
74. rps20 ENSDARG00000036044 206.91 1551.15 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
75. zgc:66286 zgc:66286 204.40 1532.33
76. sepp1a 203.14 1522.88 selenoprotein P, plasma, 1a
77. rps3 ENSDARG00000103007 200.64 1504.14 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
78. myl10 ENSDARG00000062592 195.62 1466.51 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
79. rpl26 ENSDARG00000102317 195.62 1466.51 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
80. rpl9 ENSDARG00000037350, ENSDARG00000112384 195.62 1466.51 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
81. apoc2 ENSDARG00000092155 194.37 1457.14 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
82. tpm3 ENSDARG00000005162 193.11 1447.69 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
83. rpl36 ENSDARG00000100588 191.86 1438.32 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
84. icn ENSDARG00000009978 189.35 1419.50 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
85. rpl21 ENSDARG00000010516, ENSDARG00000110263 189.35 1419.50 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
86. rps26l ENSDARG00000030408 188.10 1410.13 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
87. pfn1 ENSDARG00000088091 186.84 1400.69 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
88. rpl19 ENSDARG00000013307 183.08 1372.50 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
89. rpl6 ENSDARG00000058451 181.83 1363.13 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
90. ctsla ENSDARG00000007836 178.06 1334.86 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
91. mylpfb ENSDARG00000002589 175.56 1316.12 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
92. rps14 ENSDARG00000036629 173.05 1297.31 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
93. tnni2b.1 ENSDARG00000035958 173.05 1297.31 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
94. rps2 ENSDARG00000077291 171.79 1287.86 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
95. fabp3 ENSDARG00000023290 170.54 1278.49 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
96. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 168.03 1259.67 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
97. myl6 ENSDARG00000008494, ENSDARG00000115496 166.78 1250.30 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
98. ptmab ENSDARG00000101766 163.02 1222.11 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
99. faua ENSDARG00000099022 160.51 1203.30 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
100. RPL29 ENSDARG00000077717 159.25 1193.85 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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